FC875324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875324 vs. ExPASy Swiss-Prot
Match: EEDA_XENLA (Polycomb protein eed-A OS=Xenopus laevis GN=eed-A PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.417e-37 Identity = 84/188 (44.68%), Postives = 120/188 (63.83%), Query Frame = 3 Query: 138 KREYRVTNKLQEG-KRPLYAVVFNFIDSRYFN-VFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASCGMDNTVKIW 686 K ++ N L+E +PL+ V FN+ VFATVG NRVT+Y+C G I LQSYVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++ P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SCGMD+++K+W Sbjct: 76 KYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHPQGDIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSCGMDHSLKLW 260
BLAST of FC875324 vs. ExPASy Swiss-Prot
Match: ESC_DROVI (Polycomb protein esc OS=Drosophila virilis GN=esc PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.046e-36 Identity = 72/155 (46.45%), Postives = 102/155 (65.81%), Query Frame = 3 Query: 231 VFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 692 VFAT G NR TVY+C G + L Y D D +E FYT +W+ ++ P L A G G+IRVID+ + +++GHG +INE++ P K L++S SKD ++RLWN+QT +CI IF G GHR+EVLS+DF+ RI S GMD+++K+W + Sbjct: 92 VFATAGSNRCTVYECPRKGGLTLLHCYADPDPDEVFYTCAWSYDLKTSAPLLAAAGYRGVIRVIDIEQNEAVDNYIGHGQAINELKFHPHKLQLLLSGSKDHAIRLWNIQTHVCIAIFGGVEGHRDEVLSIDFNMRG-DRIVSSGMDHSLKLWCL 245
BLAST of FC875324 vs. ExPASy Swiss-Prot
Match: ESC_DROME (Polycomb protein esc OS=Drosophila melanogaster GN=esc PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.491e-36 Identity = 78/191 (40.84%), Postives = 115/191 (60.21%), Query Frame = 3 Query: 129 PSKKREYRVTNKLQEGKRP-LYAVVFN-FIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 692 P + Y+ ++E ++ V FN + VFAT G NRVTVY+C G + L Y D D +E FYT +W+ ++ P L A G G+IRVIDV + +++GHG +INE++ P K L++S SKD ++RLWN+Q+ +CI I G GHR+EVLS+DF+ RI S GMD+++K+W + Sbjct: 56 PKSRAAYKYDTHVKENHGANIFGVAFNTLLGKDEPQVFATAGSNRVTVYECPRQGGMQLLHCYADPDPDEVFYTCAWSYDLKTSSPLLAAAGYRGVIRVIDVEQNEAVGNYIGHGQAINELKFHPHKLQLLLSGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDFNMRG-DRIVSSGMDHSLKLWCL 245
BLAST of FC875324 vs. ExPASy Swiss-Prot
Match: ESC_MUSDO (Polycomb protein esc OS=Musca domestica GN=esc PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.263e-35 Identity = 77/192 (40.10%), Postives = 118/192 (61.46%), Query Frame = 3 Query: 120 SLTPSKKREYRVTNKLQEGK-RPLYAVVFNFIDSRYFN-VFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 686 S + +K+ Y+ L+E + ++ V FN + + + VFAT G NR +Y+C G + + Y D D +E FYT SW+ ++ P L G G+IRVID+ + ++VGHG +INE++ P + +L++S SKD ++RLWN+QT +CI IF G GHR+EVLS+DF RI S GMD+++K+W Sbjct: 54 SKSKAKRPAYKYDCHLKEDHGQAIFGVSFNHLLGKDQSMVFATAGSNRCNIYECPRKGGLKLIMCYADPDPDEVFYTCSWSYDLKTSAPLLATAGYRGVIRVIDIHRNESVGNYVGHGQAINELKFHPRQANLLLSGSKDHAIRLWNIQTHVCIAIFGGVEGHRDEVLSIDFDLRG-ERIMSSGMDHSLKLW 244
BLAST of FC875324 vs. ExPASy Swiss-Prot
Match: MES6_CAEEL (Polycomb protein mes-6 OS=Caenorhabditis elegans GN=mes-6 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16 Identity = 65/203 (32.02%), Postives = 98/203 (48.28%), Query Frame = 3 Query: 138 KREYRVTNKLQEG-KRPLYAVVFNF---IDSRYFNVFATVGGNRVTVYQC--------LEGGVIAALQSYVDEDKEESFYTVSWACNV-----DGIPF-LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 692 KR + +T KL E K+ +Y FN ID ATVGG+ + +Y L+ ++EES +TV+W + D PF +V GG G I VID + KL G IN+IRT P +L+V AS D+S+R+ +++ C+++ G H +LSVD+ + I SCG D+ + W + Sbjct: 24 KRPFVLTAKLLEDQKKAIYGCAFNQYAGIDEE--QAVATVGGSFLHMYSVPIDINNIELQWSCNFPTDKSSKVEREESLFTVTWCYDTYEAENDRNPFKVVTGGTLGHIYVIDYVSRKLSNRLRSVGWEINDIRTCPANSNLIVCASSDQSIRIHHIRNEACLIVIGGLECHAGTILSVDWSTDGDF-ILSCGFDHQLMEWDL 223 The following BLAST results are available for this feature:
BLAST of FC875324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875324 ID=FC875324; Name=FC875324; organism=Citrus clementina; type=EST; length=712bpback to top |