FC875331
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E1_MAIZE (Eukaryotic translation initiation factor 4E-1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.795e-26 Identity = 56/142 (39.44%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 164 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMAL 589 HPL++ + FW+ + Q ++ +I+ I FSTVE FW Y ++ PS L D H FK I P WED NGGKW I + S FW +LA++G+Q DYGD ICGAV+S+R ++ +++W +NA++ A +++ Sbjct: 43 HPLEHSWTFWFDNPQSKSK-QAAWGSSIRPIHTFSTVEEFWGLYNNINHPSKLIVGADFHCFKNKIEPKWEDPICANGGKWTISCGRGKSDTFWLHTLLAMIGEQFDYGDEICGAVVSVRGKQERIAIWTKNAANEAAQVSI 183
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: I4E1B_MOUSE (Eukaryotic translation initiation factor 4E type 1B OS=Mus musculus GN=Eif4e1b PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.821e-26 Identity = 60/186 (32.26%), Postives = 97/186 (52.15%), Query Frame = 2 Query: 101 SVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 S+ + A E+ + LHPL+ ++V W+ + +++DN++ + F+TVE FW Y H+ S L S D LFKEGI P+WED+ N GG+W++ K + R W + +L LVG+ +Y +CGAV++IR D +++W A D VM + K L + ++ Y Sbjct: 44 SLKTQRRKAHREHPPEVLSKLHPLQYRWVLWFFKND----RSRAWQDNLQLVTKFNTVEDFWAVYSHIKLASKLSSGCDYALFKEGILPMWEDNRNKQGGRWLLSIDKQLRHFELDRLWLETLLCLVGNCFEEYSREVCGAVVNIRTKRDKIALWTSEAEDKAGVMQIGQIYKERLGISTKTIIGY 225
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E_BOVIN (Eukaryotic translation initiation factor 4E OS=Bos taurus GN=EIF4E PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.985e-25 Identity = 58/165 (35.15%), Postives = 88/165 (53.33%), Query Frame = 2 Query: 164 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 HPL+N++ W+ + +++ N++ I F TVE FW Y H+ S L D LFK+GI P+WED N GG+W+I K RFW + VL L+G+ DY D++CGAV+++R D +++W + +AV + K L LP V+ Y Sbjct: 37 HPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETVLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGY 197
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: I4E1B_HUMAN (Eukaryotic translation initiation factor 4E type 1B OS=Homo sapiens GN=EIF4E1B PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 3.385e-25 Identity = 57/171 (33.33%), Postives = 92/171 (53.80%), Query Frame = 2 Query: 146 ELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKK----VVSGRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 E+K LHPL+N++ W+ + +++DN+ + TVE FW Y H+ S L S D LFK+GI+P+WEDS N GG+W++ K + R W + +L L+G+ ++ +CGAV++IR D ++VW R A + V+ + K L L ++ Y Sbjct: 56 EVKLELHPLQNRWALWFFKND----RSRAWQDNLHLVTKVDTVEDFWALYSHIQLASKLSSGCDYALFKDGIQPMWEDSRNKRGGRWLVSLAKQQRHIELDRLWLETLLCLIGESFEEHSREVCGAVVNIRTKGDKIAVWTREAENQAGVLHVGRVYKERLGLSPKTIIGY 222
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E_HUMAN (Eukaryotic translation initiation factor 4E OS=Homo sapiens GN=EIF4E PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.421e-25 Identity = 57/165 (34.55%), Postives = 88/165 (53.33%), Query Frame = 2 Query: 164 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 HPL+N++ W+ + +++ N++ I F TVE FW Y H+ S L D LFK+GI P+WED N GG+W+I K RFW + +L L+G+ DY D++CGAV+++R D +++W + +AV + K L LP V+ Y Sbjct: 37 HPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGY 197
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E_RAT (Eukaryotic translation initiation factor 4E OS=Rattus norvegicus GN=Eif4e PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.541e-25 Identity = 57/165 (34.55%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 164 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 HPL+N++ W+ + +++ N++ I F TVE FW Y H+ S L D LFK+GI P+WED N GG+W+I K RFW + +L L+G+ DY D++CGAV+++R D +++W + AV + K L LP V+ Y Sbjct: 37 HPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGY 197
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E_RABIT (Eukaryotic translation initiation factor 4E OS=Oryctolagus cuniculus GN=EIF4E PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.541e-25 Identity = 57/165 (34.55%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 164 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 HPL+N++ W+ + +++ N++ I F TVE FW Y H+ S L D LFK+GI P+WED N GG+W+I K RFW + +L L+G+ DY D++CGAV+++R D +++W + AV + K L LP V+ Y Sbjct: 37 HPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGY 197
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E_MOUSE (Eukaryotic translation initiation factor 4E OS=Mus musculus GN=Eif4e PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.541e-25 Identity = 57/165 (34.55%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 164 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 HPL+N++ W+ + +++ N++ I F TVE FW Y H+ S L D LFK+GI P+WED N GG+W+I K RFW + +L L+G+ DY D++CGAV+++R D +++W + AV + K L LP V+ Y Sbjct: 37 HPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGY 197
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4EA_DANRE (Eukaryotic translation initiation factor 4E-1A OS=Danio rerio GN=eif4e1a PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.541e-25 Identity = 60/192 (31.25%), Postives = 100/192 (52.08%), Query Frame = 2 Query: 83 TQTVADSVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKK----VVSGRFWEDLVLALVGDQL-DYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 T T + + N++ E++ HPL+N++ W+ + +++ N++ I F TVE FW Y H+ S L S D LFK+GI P+WED N GG+W+I K RFW + +L LVG+ D+ D++CGAV++IR D +++W + + A++ + K L +P ++ Y Sbjct: 8 TSTNPSNSEEKNEENEQQIVSLEDYIKHPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMSGCDYSLFKDGIEPMWEDERNKRGGRWLITLSKQQRRADLDRFWLETLLCLVGEAFDDHSDDVCGAVVNIRTKGDKIAIWTTDYENKDAIVHIGRVYKERLGVPPKVIIGY 195
BLAST of FC875331 vs. ExPASy Swiss-Prot
Match: IF4E_XENLA (Eukaryotic translation initiation factor 4E OS=Xenopus laevis GN=eif4e PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.866e-24 Identity = 56/165 (33.94%), Postives = 88/165 (53.33%), Query Frame = 2 Query: 164 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFWEDLVLALVGDQLD-YGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEY 643 HPL+N++ W+ + +++ N++ I F TVE FW Y H+ S L S D LFK+GI P+WED N GG+W+I K RFW + ++ L+G+ D + D++CGAV+++R D +++W + AV + K L LP V+ Y Sbjct: 33 HPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMSGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRNDLDRFWLETLMCLIGESFDEHSDDVCGAVVNVRAKGDKIAIWTTEFENKDAVTHIGRVYKERLGLPAKVVIGY 193 The following BLAST results are available for this feature:
BLAST of FC875331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875331 ID=FC875331; Name=FC875331; organism=Citrus clementina; type=EST; length=687bpback to top |