FC875332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 7.295e-38 Identity = 70/114 (61.40%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 344 G DLLNNPDL+A++ +SFK+A WFWMT Q PKPSCH VI +W PSA+D AGR+PGYG TNIINGG+ECG+G +D V +RIGF+ +C G+ GDNLDC NQRPY Sbjct: 208 GSDLLNNPDLVASD----ATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.527e-38 Identity = 71/123 (57.72%), Postives = 92/123 (74.80%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 371 G DLLNNPDL+AT+ V+SFK+A+WFWMT Q PKPSCH+VII W PS+ D A RLPG+G+ TNIINGG+ECG G ++ V++RIGF+ +C G+ PGDNLDC NQR +G L+ ++ Sbjct: 210 GVDLLNNPDLVATDP----VISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALLVDTL 328
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.625e-37 Identity = 71/114 (62.28%), Postives = 86/114 (75.44%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 344 G DLLNNPDL+A + V++FK+AIWFWMTAQPPKPSCH VI +W+PS D AGRLPGYG+ TNIINGG+ECG G + V +RIGF+ +C FG+ PG NLDC NQR + Sbjct: 217 GVDLLNNPDLVAND----AVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSF 326
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.728e-37 Identity = 73/123 (59.35%), Postives = 85/123 (69.11%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 371 G DLLNNPDLLAT+ +SFKSA WFWMT Q PKPSCH+VII W PS +D AGR+PG+GL TNIINGG+ECG G N V +RIGF+ +C G+ G+NLDC NQR Y SM Sbjct: 203 GVDLLNNPDLLATDP----TISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSYNNGPSVDSM 321
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.176e-37 Identity = 71/123 (57.72%), Postives = 87/123 (70.73%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 371 G DLLNNPDLL+++ +SFKSA WFWMT Q PKPSCH VII W PS++D AGR+PGYG+ TNIINGG+ECG G N V +RIGF+ +C G+ G+NLDC NQ P+G + SM Sbjct: 206 GVDLLNNPDLLSSDP----TISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 324
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.376e-36 Identity = 69/115 (60.00%), Postives = 86/115 (74.78%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 347 G++L+NNPDL+AT+ +SFK+AIWFWMT Q KPS H+VII W PSA D A R+PGYG+ TNIINGGIECG G NDAV +RIG++ +CG + PG+NLDC NQR +G Sbjct: 141 GQELVNNPDLVATD----ATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.003e-36 Identity = 68/113 (60.18%), Postives = 86/113 (76.11%), Query Frame = 3 Query: 6 EDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 344 EDL+NNPDLL+TN +SFK+AIWFWMT Q KPS H+VI W PSA D +AGR+PGYG+ TNIINGGIECG+G ++ V +R+GF+ +C FG+ PG NLDC+NQR + Sbjct: 211 EDLINNPDLLSTNP----TVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQRSF 319
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.828e-36 Identity = 71/126 (56.35%), Postives = 90/126 (71.43%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM*SS 380 G DLLN PDL+AT+ V+SFKSA+WFWMTAQ PKPS H+VI W PS+ DV A RLPGYG TNIINGG+ECG G + V++RIGFF +C G+ G+NLDC +Q P+G +L+ + +S Sbjct: 206 GVDLLNKPDLVATDS----VISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLLLSDLVTS 327
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 8.917e-36 Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 371 G DLLNNPDLL+++ +SFKSA WFWMT Q PKPSCH VII W PS++D AGR GYG+ TNIINGG+ECG G N V +RIGF+ +C G+ G+NLDC NQ P+G + SM Sbjct: 184 GVDLLNNPDLLSSDP----TISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 302
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.165e-35 Identity = 71/126 (56.35%), Postives = 89/126 (70.63%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM*SS 380 G DLLN PDL+AT+ V+SFKSA+WFWMTAQ PKPS H+VI W PS+ DV A RLPGYG TNIINGG+ECG G + V++RIGFF +C G+ G+NLDC +Q P+G +L + +S Sbjct: 205 GVDLLNKPDLVATDS----VISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLFLSDLVTS 326 The following BLAST results are available for this feature:
BLAST of FC875332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875332 ID=FC875332; Name=FC875332; organism=Citrus clementina; type=EST; length=666bpback to top |