FC875332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.396e-27 Identity = 57/114 (50.00%), Postives = 75/114 (65.79%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 344 G DLL NPDL+ +++ + FK+A+WFWMT Q PKPS H+VI W PS+ D AGR+PGYG+ TNII+GG+ECG G V +RIG++ DNLDC NQ+P+ Sbjct: 101 GVDLLRNPDLVTSDN----TVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYK-----------DNLDCYNQKPF 199
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.794e-27 Identity = 52/114 (45.61%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 344 G D L NP+++A ++F++A+WFWMT + KPSCH+V++ E++P DV A R G+GL TNI+NGG+EC G+ V NRIGF+ +C G+ G NLDC +Q+P+ Sbjct: 181 GFDGLRNPEIVANCSD----IAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDCEHQQPF 290
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.152e-25 Identity = 55/123 (44.72%), Postives = 79/123 (64.23%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQS 368 G DLL NP+L+AT+ ++FK+A+W WMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G A +R+ F+ +C G+ G NLDC Q P+ ++M+ S Sbjct: 221 GADLLGNPELVATDP----TVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMSAS 337
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.423e-25 Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQS 368 G DLL NP+L+AT+ ++FK+A+W WMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G A +R+ F+ +C G+ G NLDC Q P+ +M+ S Sbjct: 221 GADLLGNPELVATDP----TVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMSAS 337
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.578e-24 Identity = 53/115 (46.09%), Postives = 71/115 (61.74%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 344 G++LL+ P+ +AT+ VLSF++A+WFWM PSCHEVI EW PS D+ AGR PG+G+ TNII G EC G +NRI ++ +C + PGDNL C NQ + Sbjct: 194 GQNLLDEPEKVATDP----VLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETF 304
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 1.385e-12 Identity = 42/108 (38.89%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGND-AVR-NRIGFFTTFCGKFGIQPGDNL 320 GEDL+ NPDL+ ++ ++SFK+A+WFWM+ KPSCH++++ +AN A R+P G+ NII+ +G +D AVR + IGF+ +C G+ G +L Sbjct: 258 GEDLIQNPDLV----EKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISR----AFGHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12 Identity = 39/108 (36.11%), Postives = 53/108 (49.07%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 326 G D L NP+ +AT+ SFK+A+WFWMT +V++ G+G TT ING +EC D +RI F+ +C FG+ PGDNL C Sbjct: 206 GFDGLGNPEKVATDVNT----SFKAAMWFWMT---------------------NVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 3 Query: 93 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 230 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of FC875332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875332 ID=FC875332; Name=FC875332; organism=Citrus clementina; type=EST; length=666bpback to top |