FC875333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA1_DAUCA (Glutamine synthetase cytosolic isozyme OS=Daucus carota GN=GLN1 PE=2 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 5.019e-86 Identity = 153/199 (76.88%), Postives = 168/199 (84.42%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEKEGR 599 IEQEYTLL+K+V P+ ADKA+GRDIVD+HYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGD+LWVARYILERITEIAGVV+S DPKPI GDWNGAGAH NYSTKSMRN+GGFE+IKKAI KL +H++HIAAYGEGNERRLTGKHETA I+ F WGVA RGAS+RVGRDTEKEG+ Sbjct: 127 IEQEYTLLKKEVNCPIGCPTGGYPGPQGPYYCGIGADKAFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVVVSLDPKPIPGDWNGAGAHTNYSTKSMRNEGGFEIIKKAIAKLETKHAQHIAAYGEGNERRLTGKHETASIHKFSWGVANRGASVRVGRDTEKEGK 325
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA3_MAIZE (Glutamine synthetase root isozyme 3 OS=Zea mays GN=GLN4 PE=1 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 1.118e-85 Identity = 150/199 (75.38%), Postives = 168/199 (84.42%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEKEGR 599 IEQEYTLLQKD WPL A+K++GRDIVD+HYKACLYAGINISGINGEVMPGQWEFQVGP+VGIS+GDQ+WVARYILERITEIAGVV++FDPKPI GDWNGAGAH NYST+SMR +GG+EVIK AIEKL LRH EHIAAYGEGN+ RLTG+HETADINTF WGVA RGAS+RVGR+TE+ G+ Sbjct: 128 IEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTESMRKEGGYEVIKAAIEKLKLRHREHIAAYGEGNDGRLTGRHETADINTFSWGVANRGASVRVGRETEQNGK 326
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLN15_ARATH (Glutamine synthetase cytosolic isozyme 1-5 OS=Arabidopsis thaliana GN=GLN1-5 PE=2 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 4.249e-85 Identity = 147/199 (73.87%), Postives = 166/199 (83.42%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEKEGR 599 IEQEYTLL+KDVKWPL ADKA+GRDIVD+HYKACLY+G++I G NGEVMPGQWEFQ+ P VGI AGDQLWVARYILERITEI GV++SFDPKPIQGDWNGA AH N+STKSMR DGG ++IK+AI+KL ++H +HIAAYGEGNERRLTGKHETADINTF WGVA RGAS+RVGRDTEKEG+ Sbjct: 128 IEQEYTLLKKDVKWPLGWPLGGFPGPQGPYYCAVGADKAFGRDIVDAHYKACLYSGLSIGGANGEVMPGQWEFQISPTVGIGAGDQLWVARYILERITEICGVIVSFDPKPIQGDWNGAAAHTNFSTKSMRKDGGLDLIKEAIKKLEVKHKQHIAAYGEGNERRLTGKHETADINTFSWGVADRGASVRVGRDTEKEGK 326
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA4_MAIZE (Glutamine synthetase root isozyme 4 OS=Zea mays GN=GLN5 PE=2 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 3.597e-84 Identity = 150/199 (75.38%), Postives = 167/199 (83.92%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEKEGR 599 IEQEYTLLQKD WPL A+K++GRDIVD+HYKACLYAGINISGINGEVMPGQWEFQVGP+VGIS+GDQ+WVARYILERITEIAGVV++FDPKPI GDWNGAGAH NYST+SMR +GG+EVIK AIEKL LRH EHIAAYGEGNERRLTG+HETADINTF WGVA RGAS+ VG+ TE+ G+ Sbjct: 128 IEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTESMRKEGGYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASVAVGQ-TEQNGK 325
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA3_LUPAN (Glutamine synthetase nodule isozyme (Fragment) OS=Lupinus angustifolius PE=2 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 3.045e-83 Identity = 148/188 (78.72%), Postives = 160/188 (85.11%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASI 566 IEQEYTLLQKD+ WP+ A+KA+GRDIVDSHYKACLYAGINISGIN EVMPGQWEFQVGP++GISAGD+LWVARYILERITEIAGVVLS DPKPI GDWNGAGAH NYSTKSMRNDGG+EVIK+AIEKL RH+EHIAAYGEGNERRLTG+HETADI+TF WGVA RGASI Sbjct: 128 IEQEYTLLQKDIHWPIGMALGGFPGPQGPYYCGTGAEKAFGRDIVDSHYKACLYAGINISGINAEVMPGQWEFQVGPSIGISAGDELWVARYILERITEIAGVVLSLDPKPIPGDWNGAGAHTNYSTKSMRNDGGYEVIKQAIEKLEKRHNEHIAAYGEGNERRLTGRHETADISTFSWGVANRGASI 315
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA2_MEDSA (Glutamine synthetase leaf isozyme, chloroplastic OS=Medicago sativa GN=GS2 PE=2 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 5.194e-83 Identity = 148/199 (74.37%), Postives = 158/199 (79.40%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEKEGR 599 IEQEYTLLQ DVKWPL ADK++GRDI D+HYKACLYAGINISG NGEVMPGQWE+QVGP+VGI AGD +W +RYILERITE AGVVL+ DPKPI+GDWNGAG H NYSTKSMR DGGFEVIKKAI L LRH HI AYGEGNERRLTGKHETA INTF WGVA RG SIRVGRDTEK G+ Sbjct: 184 IEQEYTLLQTDVKWPLGWPVGGYPGPQGPYYCAAGADKSFGRDISDAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWASRYILERITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHKVHIEAYGEGNERRLTGKHETASINTFSWGVANRGCSIRVGRDTEKNGK 382
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA4_PHAVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 8.860e-83 Identity = 147/199 (73.87%), Postives = 159/199 (79.90%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEKEGR 599 IEQEYTLLQ +V WPL ADK++GRDI D+HYKACL+AGINISG NGEVMPGQWE+QVGP+VGI AGD +W +RYILERITE AGVVLS DPKPI+GDWNGAG H NYSTKSMR DGGFEVIKKAI L LRH EHI+AYGEGNERRLTGKHETA INTF WGVA RG SIRVGRDTEK G+ Sbjct: 185 IEQEYTLLQTNVNWPLGWPVGGYPGPQGPYYCSAGADKSFGRDISDAHYKACLFAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWASRYILERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASINTFSWGVANRGCSIRVGRDTEKNGK 383
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNAC_BRANA (Glutamine synthetase, chloroplastic OS=Brassica napus GN=GLN2 PE=2 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 1.511e-82 Identity = 146/199 (73.37%), Postives = 159/199 (79.90%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEKEGR 599 IEQEYTLLQ +V WPL A+K+WGRDI D+HYKACLYAGINISG NGEVMPGQWEFQVGP+VGI AGD +W ARY+LERITE AGVVL+ DPKPI+GDWNGAG H NYSTKSMR DGGFEVIKKAI L LRH EHI+AYGEGNERRLTGKHETA I+ F WGVA RG SIRVGRDTEK+G+ Sbjct: 184 IEQEYTLLQPNVNWPLGWPVGAYPGPQGPYYCGVGAEKSWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHVWCARYLLERITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHMEHISAYGEGNERRLTGKHETASIDQFSWGVANRGCSIRVGRDTEKKGK 382
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA2_DAUCA (Glutamine synthetase, chloroplastic OS=Daucus carota GN=GLN2 PE=2 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 1.511e-82 Identity = 146/199 (73.37%), Postives = 160/199 (80.40%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEKEGR 599 IEQEYTL+Q+DV WPL ADK++GRDI D+HYKACLYAGINISG NGEVMPGQWEFQVGP+VGI AGD +W ARY+LERITE AGVVL+ DPKPI GDWNGAG H NYSTKSMR +GGFEVIKKAI L LRH EHI+AYGEGNERRLTGKHETA I++F WGVA RG SIRVGRDTEKEG+ Sbjct: 188 IEQEYTLMQQDVNWPLGWNVGGYPGPQGPYYCAAGADKSFGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYLLERITEQAGVVLTLDPKPIDGDWNGAGCHTNYSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVADRGCSIRVGRDTEKEGK 386
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA2_ARATH (Glutamine synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GLN2 PE=1 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 1.511e-82 Identity = 146/199 (73.37%), Postives = 159/199 (79.90%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEKEGR 599 IEQEYTLLQ++VKWPL ADK WGRDI D+HYKACLYAGINISG NGEVMPGQWEFQVGP+VGI AGD +W ARY+LERITE AGVVL+ DPKPI+GDWNGAG H NYSTKSMR +GGFEVIKKAI L LRH EHI+AYGEGNERRLTGKHETA I+ F WGVA RG SIRVGRDTE +G+ Sbjct: 186 IEQEYTLLQQNVKWPLGWPVGAFPGPQGPYYCGVGADKIWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIDAGDHVWCARYLLERITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDQFSWGVANRGCSIRVGRDTEAKGK 384 The following BLAST results are available for this feature:
BLAST of FC875333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875333 ID=FC875333; Name=FC875333; organism=Citrus clementina; type=EST; length=634bpback to top |