FC875333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA_CRIGR (Glutamine synthetase OS=Cricetulus griseus GN=GLUL PE=2 SV=4) HSP 1 Score: 196.438 bits (498), Expect = 9.887e-50 Identity = 103/201 (51.24%), Postives = 128/201 (63.68%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEKE 593 +EQEYTLL D P ADKA+ RDI+++HY+ACLYAG+ I+G EV QWEFQ+GP GI GD LWVAR+IL R+ + GV+ +FD KPI G+WNGAG H N+STK+MR + G + IK+AIEKL RH HI AY G N RRLTG H+T++IN F GVA R ASIR+ R +E Sbjct: 133 MEQEYTLLGTDGH-PFGWPSDGFPGPQGLYYCGVGADKAYRRDIMEAHYRACLYAGVKITGTYAEVKHAQWEFQIGPCEGIRMGDHLWVARFILHRVCKDFGVIATFDSKPIPGNWNGAGCHTNFSTKTMREENGLKHIKEAIEKLSKRHRYHIRAYDPKGGLDNARRLTGFHKTSNINDFSAGVADRSASIRIPRTVGQE 332
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA_CAEEL (Probable glutamine synthetase OS=Caenorhabditis elegans GN=gln-2 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.428e-48 Identity = 98/203 (48.28%), Postives = 125/203 (61.58%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKP--IQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEKE 593 +EQEY ++ +D + PL AD+A+GR++V++HY+ACL+AG+NI G N EV PGQWEFQ+G GI GDQLW++RYIL R+ E GV +S DPKP GDWNGAG H N+ST MR GG I+ A+ L H E + Y GE N RRLTG+HET+ + F WGVA RG SIR+ R E Sbjct: 137 MEQEYLIVDRD-EHPLGWPKHGFPDPQGKYYCSVGADRAFGREVVETHYRACLHAGLNIFGTNAEVTPGQWEFQIGTCEGIDMGDQLWMSRYILHRVAEQFGVCVSLDPKPKVTMGDWNGAGCHTNFSTAEMRAPGGIAAIEAAMTGLKRTHLEAMKVYDPHGGEDNLRRLTGRHETSSADKFSWGVANRGCSIRIPRQVAAE 338
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA2_STRVR (Glutamine synthetase 2 OS=Streptomyces viridochromogenes GN=glnII PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.520e-45 Identity = 95/201 (47.26%), Postives = 123/201 (61.19%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKL--GLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEKEGR 599 IEQEYT Q +PL AD+ +GRD+V++H CL AG+ ISGIN EVMPGQWEFQVGP + D LWVAR++L R E V + DPKP++GDWNGAGAH N+STK+MR ++ I A E L G + +H+ YG G + RLTG HETA N + +GV+ RGAS+R+ EK+G+ Sbjct: 112 IEQEYTFFQDG--YPLGFPKGGFPAPQGGYYCGVGADEIFGRDVVEAHLDNCLKAGLAISGINAEVMPGQWEFQVGPVSPLEVSDHLWVARWLLYRTAEDFDVAATLDPKPVKGDWNGAGAHTNFSTKAMRE--SYDAIITAAESLGEGSKPLDHVKNYGAGIDDRLTGLHETAPWNEYSYGVSDRGASVRIPWQVEKDGK 308
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA2_FRAAL (Glutamine synthetase 2 OS=Frankia alni GN=glnII PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.294e-41 Identity = 92/198 (46.46%), Postives = 114/198 (57.58%), Query Frame = 3 Query: 3 IEQEYTLLQ--KDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEK 590 IEQEYT + + WP K GR IV+ H +ACL AG+ I G N EVM GQWEFQ+G + GDQ+W+ R++L RI E GV +SF KPI GDWNGAGAH N+STK G++ I E LG R +EH+ YG+G E RLTGKHETA N + WG + RGAS+R+ EK Sbjct: 107 IEQEYTFFKDGRPYGWP----EVGYPAPQGPYYCGVGGSKMPGRQIVERHTQACLDAGLAIEGTNAEVMMGQWEFQIGVLPAPAIGDQIWLGRWLLHRIAEDYGVEVSFAAKPIPGDWNGAGAHTNFSTKQTME--GWDAIVTCCEALGTRVTEHVTHYGKGIEDRLTGKHETAPWNKYSWGASDRGASVRIPWAVEK 298
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA2_STRHY (Glutamine synthetase 2 OS=Streptomyces hygroscopicus GN=glnB PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41 Identity = 93/200 (46.50%), Postives = 118/200 (59.00%), Query Frame = 3 Query: 3 IEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXX-ADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGL--RHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRVGRDTEKE 593 IEQEYT L+ D PL AD +GR+IV+ H CL AG+ +SGIN EVMPGQWEFQVG + D +WVAR++L R+ E GV S D KP +GDWNGAGAH N+ST++MR G++ I A E LG + EH+ YG G E RLTG HETA + + +G + RGAS+R+ E E Sbjct: 108 IEQEYTFLKGDR--PLGFPEGGGYPAPQADYYCGVGADAIFGREIVEKHLDLCLAAGLGLSGINAEVMPGQWEFQVGALPPLEVSDHMWVARWLLHRVAEEFGVTASLDAKPAKGDWNGAGAHTNFSTRAMRE--GYDPIITACEALGQDDKPLEHVRQYGTGIEDRLTGAHETAPWDAYSYGASDRGASVRIPWQVEVE 303
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA2_RHILP (Glutamine synthetase 2 OS=Rhizobium leguminosarum bv. phaseoli GN=glnII PE=1 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 2.138e-36 Identity = 76/150 (50.67%), Postives = 97/150 (64.67%), Query Frame = 3 Query: 126 RDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPI-QGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRV 572 R+IV+ H CL AGIN GIN EV GQWEFQ+ A DQ+W+ARY+L+R+TE G+ + + KP+ DWNG+G H N+STK +R GG E + + +HIA YG N++RLTGKHETA N F +GVA RGASIRV Sbjct: 146 REIVEEHLDLCLAAGINHEGINAEVAKGQWEFQIFGKGSKKAADQIWMARYLLQRLTEKYGIDIEYHCKPLGDTDWNGSGMHCNFSTKYLREVGGKEYFEALMASSDKNLMDHIAVYGPDNDKRLTGKHETAPWNKFSYGVADRGASIRV 295
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA2_BRAJA (Glutamine synthetase 2 OS=Bradyrhizobium japonicum GN=glnII PE=3 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.061e-35 Identity = 76/150 (50.67%), Postives = 96/150 (64.00%), Query Frame = 3 Query: 126 RDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPI-QGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRV 572 R IV+ H CL AGIN GIN EV GQWEFQ+ A D++W+ARY++ R+TE G+ + F KP+ DWNG+G HAN+ST+ MR GG E + + +HIA YG N++RLTGKHETA N F +GVA RGASIRV Sbjct: 149 RKIVEEHLDLCLAAGINHEGINAEVAKGQWEFQIFGKGSKKAADEMWMARYLMLRLTEKYGIDIEFHCKPLGDTDWNGSGMHANFSTEYMRTVGGKEYFEALMAAFDKNLMDHIAVYGPDNDKRLTGKHETAPWNKFSYGVADRGASIRV 298
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA2_RHIME (Glutamine synthetase 2 OS=Rhizobium meliloti GN=glnII PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.447e-32 Identity = 78/153 (50.98%), Postives = 94/153 (61.44%), Query Frame = 3 Query: 126 RDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPI-QGDWNGAGAHANYSTKSMRNDGG---FEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYRGASIRV 572 R IV+ H CL AGIN GIN EV GQWEFQ+ A D++ VARY+L R+TE G+ + F KP+ DWNG+G HAN+ST +R GG FE + A EK +HI YG N RLTGKHETA + F +GVA RGASIRV Sbjct: 149 RQIVEEHLDICLAAGINHEGINAEVAKGQWEFQIFGKGSKKAADEVCVARYLLVRLTEKYGIDVEFHCKPLGDTDWNGSGMHANFSTAYLREVGGQDYFEALMAAFEK---NLHDHINVYGPDNHLRLTGKHETAPWDKFSYGVADRGASIRV 298
BLAST of FC875333 vs. ExPASy Swiss-Prot
Match: GLNA_VITSX (Glutamine synthetase (Fragments) OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.823e-11 Identity = 37/54 (68.52%), Postives = 38/54 (70.37%), Query Frame = 3 Query: 393 RNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVAYR 554 +NDGGFEVIKK H EHIAAYGEGNER HETADINTF WGVA R Sbjct: 11 KNDGGFEVIKK--------HKEHIAAYGEGNER-----HETADINTFLWGVANR 51 The following BLAST results are available for this feature:
BLAST of FC875333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875333 ID=FC875333; Name=FC875333; organism=Citrus clementina; type=EST; length=634bpback to top |