FC875336

Overview
NameFC875336
Unique NameFC875336
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: ACT3_STRCO (Putative ketoacyl reductase OS=Streptomyces coelicolor GN=actIII PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13
Identity = 59/193 (30.57%), Postives = 91/193 (47.15%), Query Frame = 1
Query:  103 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD---AAPHMQKGSS-VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNCVAPGFVPTHFAQAL 666
            +VA+VT +T GIGL +A RLG EG  V + +R ++ +   +++L+  G+E  G  C V +    + L+   VE+YG +DV V NA      A      E  LD + E N+     + +    A   +++G+  +V I+S  G Q     A Y                E+A     VN V PGFV T  A ++
Sbjct:    7 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVV-ETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASV 198          
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans GN=stcU PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.120e-12
Identity = 39/140 (27.86%), Postives = 76/140 (54.29%), Query Frame = 1
Query:   91 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS 507
            R  GKVA+VT + +GIG  +A  LG  GA VV++ +  ++  +K V+++K+ G + I I   V +      L+D+ VE +G +D+   NA +  +   +        D+++ +N +    + ++A  H+++G  ++  SS
Sbjct:    8 RLDGKVALVTGAGRGIGAAIAVALGQRGAKVVVNYANSREAAEKVVDEIKSNGSDAISIQADVGDPDAVTKLMDQAVEHFGYLDIVSSNAGIVSF-GHVKDVTPDEFDRVFRVNTRGQFFVAREAYRHLREGGRIILTSS 146          
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: BUTA_STAES (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=butA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.462e-12
Identity = 50/186 (26.88%), Postives = 88/186 (47.31%), Query Frame = 1
Query:  103 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSS---VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNCVAPGFVPT 648
            K A++T +  G+G G+AERL  +G ++V+    +  + +  ++ K  G + +     VS ++ ++ L+   V ++G++DV V NA V+     +L+  E  L KL+ INV  ++  +Q AA    K  S   ++   SIAG++    +  Y                E+A     VN   PG   T
Sbjct:    3 KTAIITGAAGGLGKGIAERLANDGFNIVLQDINEALLLETEKEFKEKGYQAVAYKSDVSKKKEQEELVQFAVTEFGQLDVMVNNAGVDA-VTPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKT 187          
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: BPHB_PSES1 (Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=Pseudomonas sp. (strain KKS102) GN=bphB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.462e-12
Identity = 56/195 (28.72%), Postives = 90/195 (46.15%), Query Frame = 1
Query:   91 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTK----ESVLDKLWEINVKSSILLMQDAAPHM-QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCVAPGFVPT 648
            +   +VA+VT    G+G  + +R   EGA V +       +DK+  +L+ L    G +V+GI   V      +    + V  +G+ID  + NA +  Y+  L+       ++  D+++ INVK  +L ++   P + Q   SVVF  S AG+ P     +Y                E+AP  RVN VAPG + T
Sbjct:    2 QLNNEVALVTGGGSGLGRAIVDRFVAEGARVAV-------LDKSAARLQELQAAHGAKVLGIEGDVRVLADHQKAARECVAAFGKIDCLIPNAGIWDYSMPLVDIPDDRIDAAFDEVFHINVKGYLLAVKACLPALVQSRGSVVFTISNAGFYPNGGGPLYTGAKHAVVGMVRELAYELAPHVRVNGVAPGGMST 189          
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: BPHB_PSEPS (Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=Pseudomonas pseudoalcaligenes GN=bphB PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.910e-12
Identity = 48/186 (25.81%), Postives = 84/186 (45.16%), Query Frame = 1
Query:   91 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVL----DKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCVAPG 636
            + +G+  ++T    G+G  + +R   E    V+     K+ ++  E    LG  V+GI+  V + + +K    + V ++G+ID  + NA +  Y+  L+   E  L    D+++ INVK  I  ++     +    +V+F  S AG+ P     +Y                E+AP  RVN V PG
Sbjct:    2 KLKGEAVLITGGASGLGRALVDRFVAEAKVAVLD----KSAERLAELETDLGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKALPALVASRGNVIFTISNAGFYPNGGGPLYTAAKQAIVGLVRELAFELAPYVRVNGVGPG 183          
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: HDHA_ECOLI (7-alpha-hydroxysteroid dehydrogenase OS=Escherichia coli (strain K12) GN=hdhA PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12
Identity = 54/197 (27.41%), Postives = 91/197 (46.19%), Query Frame = 1
Query:   91 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNA-AVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNCVAPGFVPTHFAQALL 669
            R  GK A++T +  GIG  +A      GASVV+S       +  V++++ LG +     C +++EQ    L D  + K G++D+ V NA    P   D+     +   + +E+NV S   L Q  AP M+K  G  ++ I+S+A       M  Y                ++   + RVN +APG + T   ++++
Sbjct:    8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDM---PMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI 201          
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: HDHA_ECO57 (7-alpha-hydroxysteroid dehydrogenase OS=Escherichia coli O157:H7 GN=hdhA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12
Identity = 54/197 (27.41%), Postives = 91/197 (46.19%), Query Frame = 1
Query:   91 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNA-AVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNCVAPGFVPTHFAQALL 669
            R  GK A++T +  GIG  +A      GASVV+S       +  V++++ LG +     C +++EQ    L D  + K G++D+ V NA    P   D+     +   + +E+NV S   L Q  AP M+K  G  ++ I+S+A       M  Y                ++   + RVN +APG + T   ++++
Sbjct:    8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDM---PMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI 201          
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: DHK1_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12
Identity = 53/194 (27.32%), Postives = 88/194 (45.36%), Query Frame = 1
Query:  106 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EINVKSSILLMQD----AAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNCVAPGFVPTHFAQ 660
            VA+VT +T GIGL +A RL   GA   + +R ++ + + V++L+  G +V G +C V++    +  +   V++YG +D+ V NA  +   A        + D+LW      N+ S  L+ ++         +K   ++ I+S  G Q       Y                E+A     VN V PGFV T  A+
Sbjct:   19 VALVTGATSGIGLAIARRLAALGARTFLCARDEERLAQTVKELRGEGFDVDGTVCDVADPAQIRAYVAAAVQRYGTVDILVNNAGRSGGGA-----TAEIADELWLDVITTNLTSVFLMTKEVLNAGGMLAKKRGRIINIASTGGKQGVVHAVPYSASKHGVVGLTKALGLELARTGITVNAVCPGFVETPMAE 207          
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: SOU2_CANAL (Sorbose reductase homolog SOU2 OS=Candida albicans GN=SOU2 PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12
Identity = 55/193 (28.50%), Postives = 85/193 (44.04%), Query Frame = 1
Query:   97 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTK-ESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAG--YQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCVAPGFVPTHFAQ 660
            +GKVA VT S+ GIG  VAE     GA V I        DKA    K  G++     C+V++ Q  + ++ +    +G ID+FV NA V       +  K     +K+ ++++ S         P  +K    S +F +S++      P   A Y                E AP  RVN V+PG++ TH ++
Sbjct:   34 KGKVASVTGSSGGIGWAVAEGYAQAGADVAIWYNSHPADDKAEYLTKTYGVKSKAYKCNVTDFQDVEKVVKQIESDFGTIDIFVANAGVAWTEGPEIDVKGVDKWNKVVDVDLNSVYYCAHVVGPIFRKKGKGSFIFTASMSASIVNVPQLQAAYNAAKAGVKHLSKSLSVEWAPFARVNSVSPGYIATHLSE 226          
BLAST of FC875336 vs. ExPASy Swiss-Prot
Match: FABG1_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803) GN=fabG1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12
Identity = 56/192 (29.17%), Postives = 88/192 (45.83%), Query Frame = 1
Query:  103 KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPGFVPTHFAQAL 666
            +VA+VT +++GIG   A  L   G  VV++ ++     D  V ++ A G E I +  +V+N      LI  T++K+ RIDV V NA +      LL+ K      + ++N+    L  +  +  M  QK   ++ I+S+AG       A Y                E+A     VN VAPGF+ T   + L
Sbjct:    7 QVALVTGASRGIGKATALALAATGMKVVVNYAQSSTAADAVVAEIIANGGEAIAVQANVANADEVDQLIKTTLDKFSRIDVLVNNAGITRDTL-LLRMKLEDWQAVIDLNLTGVFLCTKAVSKLMLKQKSGRIINITSVAGMMGNPGQANYSAAKAGVIGFTKTVAKELASRGVTVNAVAPGFIATDMTENL 197          
The following BLAST results are available for this feature:
BLAST of FC875336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ACT3_STRCO8.573e-1330.57Putative ketoacyl reductase OS=Streptomyces coelic... [more]
STCU_EMENI1.120e-1227.86Versicolorin reductase OS=Emericella nidulans GN=s... [more]
BUTA_STAES1.462e-1226.88Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
BPHB_PSES11.462e-1228.72Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=... [more]
BPHB_PSEPS1.910e-1225.81Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=... [more]
HDHA_ECOLI2.494e-1227.417-alpha-hydroxysteroid dehydrogenase OS=Escherichi... [more]
HDHA_ECO572.494e-1227.417-alpha-hydroxysteroid dehydrogenase OS=Escherichi... [more]
DHK1_STRVN2.494e-1227.32Granaticin polyketide synthase putative ketoacyl r... [more]
SOU2_CANAL3.258e-1228.50Sorbose reductase homolog SOU2 OS=Candida albicans... [more]
FABG1_SYNY35.557e-1229.173-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Sy... [more]

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Properties
Property NameValue
Genbank descriptionC31402G10EF CTVClemen1 Citrus clementina cDNA clone C31402G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875336 ID=FC875336; Name=FC875336; organism=Citrus clementina; type=EST; length=683bp
GATCTAAGGGTTATTCAGAACTGAAAATCCTCATCACCAAAAACAGTAAT
TCATTGGCTTATCCAAATGGAGAAGGTGAACATGGCAAAAAGATTCCAAG
GGAAGGTTGCGGTCGTGACGGCTTCGACTCAAGGCATTGGCTTAGGCGTC
GCTGAAAGACTCGGTTTGGAAGGCGCCTCTGTTGTTATCTCCTCTAGAAA
GCAGAAAAATGTGGACAAAGCAGTTGAGAAACTCAAAGCTCTAGGAATCG
AGGTTATTGGAATTATTTGTCATGTATCAAACGAACAACATAGGAAGAAT
CTCATAGACAAAACTGTTGAGAAATATGGAAGAATAGATGTGTTTGTTTT
AAATGCTGCTGTCAATCCCTATGCTGCTGATCTTCTGAAAACCAAAGAAT
CTGTACTGGACAAGTTATGGGAAATCAATGTCAAATCCAGTATACTTCTT
ATGCAGGATGCTGCACCTCACATGCAGAAGGGTTCTTCAGTCGTTTTCAT
TTCCTCCATAGCTGGTTATCAACCACCGTCAGCCATGGCTATGTATGGAG
TGACTAAGACAGCCCTGTTAGGTTTGACTAAGGCCCTCGCGGCTGAGATG
GCCCCAGATACTCGTGTGAATTGTGTTGCTCCTGGTTTTGTGCCGACACA
CTTTGCTCAGGCCCTTCTAGGCAATGATGCTGT
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