FC875338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2) HSP 1 Score: 230.335 bits (586), Expect = 2.992e-60 Identity = 117/167 (70.06%), Postives = 125/167 (74.85%), Query Frame = 2 Query: 179 KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 KDYTDPPP PLFD EL WSFYRALIAEFIA IGYK Q+ + D C GVG LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGL LARKVS++RAVMY+VAQCLG I GVG+VK K Y GGGAN +A GYSTG L AEIIGTFVLV Sbjct: 15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQS----SADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLV 177 HSP 2 Score: 23.0978 bits (48), Expect = 2.992e-60 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 682 TVFSATDPRESA 717 TVFSATDP+ +A Sbjct: 179 TVFSATDPKRNA 190
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 3.901e-60 Identity = 116/182 (63.74%), Postives = 134/182 (73.63%), Query Frame = 2 Query: 134 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 ++++ V +HG KDY DPPP P FD EL WSF+RA IAEFIA IGYK +TDP CA VG+LGIAW+FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL+RA++YM+AQC GAI GVGLVKAF K Y ++GGGAN +A GY+ G AE+IGTFVLV Sbjct: 6 ISEEGQVHQHG----KDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDP------CASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLV 177 HSP 2 Score: 24.2534 bits (51), Expect = 3.901e-60 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 682 TVFSATDPRESA 717 TVFSATDP+ SA Sbjct: 179 TVFSATDPKRSA 190
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 8.503e-54 Identity = 113/184 (61.41%), Postives = 127/184 (69.02%), Query Frame = 2 Query: 128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 FP + G + + KDY +PPP PLF+ EL+ WSFYRA IAEFIA +G K A N+ CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCLGAI G G+VK FQ + Y GGGAN +A GY+ G GL AEIIGTFVLV Sbjct: 15 FPERQPIGTSAQST--DKDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKR----APNM--CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLV 190
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.894e-53 Identity = 109/177 (61.58%), Postives = 124/177 (70.06%), Query Frame = 2 Query: 149 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 G A G+ KDY +PPP PLF+A ELT WSFYRA IAEF+A +G +K+ CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAI G G+VK FQ+ Y GGGAN + GY+ G GL AEI+GTFVLV Sbjct: 22 GTAAQGT-EEKDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGV------SKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLV 191
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 209.149 bits (531), Expect = 1.894e-53 Identity = 110/184 (59.78%), Postives = 124/184 (67.39%), Query Frame = 2 Query: 128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 F + G A GS KDY +PPP PLF+ EL WSFYRA IAEF+A +G + T CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAI G G+VK FQK Y GGGAN +A GY+ G GL AEI+GTF+LV Sbjct: 15 FSERQPIGTAAQGS-DDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSK------CATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILV 191
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 2.437e-53 Identity = 105/175 (60.00%), Postives = 121/175 (69.14%), Query Frame = 2 Query: 158 EHGSYSAK-DYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 E G+ +AK Y DPPP PL D EL KWS YRALIAEF+A IGYK+Q VD C GVG LG+AW+FG IFVLVYCT G+SGGHINPAVT GLF RK+SLVR V+Y+VAQCLGAI+G G+VK K Y GGGAN ++DGYS L AEI+GTF+LV Sbjct: 13 EGGAAAAKAPYWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQR---ATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILV 184 HSP 2 Score: 23.0978 bits (48), Expect = 2.437e-53 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 682 TVFSATDPRESA 717 TVFSATDP+ +A Sbjct: 186 TVFSATDPKRTA 197
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.474e-53 Identity = 111/184 (60.33%), Postives = 126/184 (68.48%), Query Frame = 2 Query: 128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 FP + G + + S KDY +PPP PLF+ EL WSF+RA IAEFIA +G K ++ + CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAI G G+VK FQ Y GGGAN +A GY+ G GL AEIIGTFVLV Sbjct: 15 FPERQPIGTS---AQSDKDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLV 189
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.474e-53 Identity = 106/177 (59.89%), Postives = 123/177 (69.49%), Query Frame = 2 Query: 149 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 G A G+ KDY +PPP PLF+ EL WSFYRA IAEF+A +G +K+ CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ+ Y GGGAN +A GY+ G GL AEI+GTF+LV Sbjct: 22 GTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGV------SKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILV 192
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.231e-53 Identity = 105/184 (57.07%), Postives = 125/184 (67.93%), Query Frame = 2 Query: 128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 F + G A G+ KDY +PPP PLF+ EL WSFYRA IAEF+A +G +K+ CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGA+ G G+VK FQ+ Y GGGAN +A GY+ G GL AEI+GTF+LV Sbjct: 15 FSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGV------SKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILV 192
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 5.511e-53 Identity = 112/184 (60.87%), Postives = 127/184 (69.02%), Query Frame = 2 Query: 128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 FP + G + + + KDY +PPP P F+ EL+ WSFYRA IAEFIA +G K A N+ CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAI G G+VK FQ + Y GGGAN +A GY+ G GL AEIIGTFVLV Sbjct: 15 FPERQPIGTS---AQTDKDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKR----APNM--CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLV 189 The following BLAST results are available for this feature:
BLAST of FC875338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875338 ID=FC875338; Name=FC875338; organism=Citrus clementina; type=EST; length=724bpback to top |