FC875338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.327e-14 Identity = 51/147 (34.69%), Postives = 74/147 (50.34%), Query Frame = 2 Query: 239 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 +F++A+ AEF+A I + + +P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ ++V Y+ AQCLGAI G G++ G G + + G GL E+I TF LV Sbjct: 33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLV 171
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.733e-14 Identity = 51/147 (34.69%), Postives = 73/147 (49.66%), Query Frame = 2 Query: 239 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 +F++A+ AEF+A I + +P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ ++V Y+ AQCLGAI G G++ G G + + G GL E+I TF LV Sbjct: 33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLV 171
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.733e-14 Identity = 51/147 (34.69%), Postives = 73/147 (49.66%), Query Frame = 2 Query: 239 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 +F++A+ AEF+A I + +P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ ++V Y+ AQCLGAI G G++ G G + + G GL E+I TF LV Sbjct: 36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVG-GLGVTTVHGNLTAGHGLLVELIITFQLV 174
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.861e-14 Identity = 51/147 (34.69%), Postives = 72/147 (48.98%), Query Frame = 2 Query: 239 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 +F++A+ AEF+A I + P V ++ I+ FG I +V C ISGGHINPAVT + R++S+ ++V Y+ AQCLGAI G G++ G G + S G GL E+I TF LV Sbjct: 33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAEKPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLSAGHGLLVELIITFQLV 171
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14 Identity = 51/147 (34.69%), Postives = 72/147 (48.98%), Query Frame = 2 Query: 239 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 +F++A+ AEF+A I + P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ ++V Y+ AQCLGAI G G++ G G + + G GL E+I TF LV Sbjct: 33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTMVHGNLTAGHGLLVELIITFQLV 171
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4) HSP 1 Score: 77.7962 bits (190), Expect = 6.586e-14 Identity = 42/100 (42.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 380 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 IA+ FG ++ L +SG HINPAVT GL + VS+++ Y+V+QC+GAI+G ++KA S G G +A G STG G+ E + TF+LV Sbjct: 57 IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVG-GLGVTGIAPGLSTGQGVLIEALITFMLV 155
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.602e-14 Identity = 53/153 (34.64%), Postives = 76/153 (49.67%), Query Frame = 2 Query: 224 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAG-VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 679 E T +A +AEFI+ I Y T+ DG A G++ + A +FV V A ISGGH+NPAVTFG F+ ++L+R ++Y++AQ LG+I L+ S +G L++G G L EI+ TF LV Sbjct: 13 EATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTN-----DGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLV 155
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13 Identity = 56/148 (37.84%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 248 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG----LAAEIIGTFVLV 679 RA +AEFI+ I + TD +G+ +A AFG +FV V A ISGGH+NPAVTFG+ L ++L+R ++Y +AQ LG+++ F S+ T GG A G S GVG L EI+ TF LV Sbjct: 22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTP--SGLVAAALAHAFG--LFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAA-----CFLLSFAT---GGEPIPAFGLSAGVGSLNALVFEIVMTFGLV 157
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13 Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 2 Query: 224 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG----LAAEIIGTFVLV 679 EL+ +A +AEFI+ + + TD G G++ + A +FV V A ISGGH+NPAVTFG F+ +SLV+AV+Y VAQ LG++ L+K GGA A S GVG + EI+ TF LV Sbjct: 13 ELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGG----GTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIAT--------GGAAVGAFSLSAGVGAWNAVVFEIVMTFGLV 156
BLAST of FC875338 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 49/118 (41.53%), Postives = 66/118 (55.93%), Query Frame = 2 Query: 362 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGT--FVLV*LSS 691 G+G LG+A AFG + + Y GISGGH NPAV+ GL +A ++ + Y VAQ LGAI+ + V A K ++ G G EL+ GYS GL EII T F+++ L S Sbjct: 33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGS 150 The following BLAST results are available for this feature:
BLAST of FC875338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875338 ID=FC875338; Name=FC875338; organism=Citrus clementina; type=EST; length=724bpback to top |