FC875341

Overview
NameFC875341
Unique NameFC875341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 4.759e-76
Identity = 87/116 (75.00%), Postives = 98/116 (84.48%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF D +VQ D+K +PFKVI    DKP + V YKGE K FA EEISSMVL+KM+EIAE++LG  +KNAV+TVPAYFNDSQRQATKDAG I GLNV+RIINEPTAAAIAYGL
Sbjct:   74 KRLIGRRFQDPAVQEDVKPFPFKVICKDGDKPAVEVKYKGETKIFAPEEISSMVLLKMKEIAESFLGKEVKNAVITVPAYFNDSQRQATKDAGAITGLNVLRIINEPTAAAIAYGL 189          

HSP 2 Score: 132.88 bits (333), Expect = 4.759e-76
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 1
Query:  109 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            M  K EG AIGIDLGTTYSCVGVW HDRVE+IANDQGNRTTPSYV FT+TERLIGD+AKNQVAMNP NTVFDA+
Sbjct:    1 MENKIEGVAIGIDLGTTYSCVGVWLHDRVEVIANDQGNRTTPSYVAFTETERLIGDSAKNQVAMNPDNTVFDAK 74          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 8.095e-76
Identity = 88/116 (75.86%), Postives = 99/116 (85.34%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F+D  VQ DMK WPFKV++    KP + V+YKGE K F  EEISSMVL+KMREIAEAYLG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV+RIINEPTAAAIAYG+
Sbjct:   73 KRLIGRKFNDQVVQADMKHWPFKVVSD-GGKPKVQVDYKGENKSFNPEEISSMVLVKMREIAEAYLGQKVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGM 187          

HSP 2 Score: 130.183 bits (326), Expect = 8.095e-76
Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 1
Query:  124 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            +GP+IGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDA+
Sbjct:    5 KGPSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.796e-75
Identity = 84/116 (72.41%), Postives = 96/116 (82.76%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F+D + Q D+K WPFKV  G  DKP I V +KGE K F  EEISSMVLIKM+E+AEA++G  + NAV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPT AAIAYGL
Sbjct:   73 KRLIGRKFNDPATQADIKHWPFKVTPGAGDKPQITVEFKGETKTFQPEEISSMVLIKMKEVAEAFIGTAVNNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTRAAIAYGL 188          

HSP 2 Score: 130.568 bits (327), Expect = 1.796e-75
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 1
Query:  124 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            +G ++GIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDA+
Sbjct:    5 QGASVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPANTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.342e-75
Identity = 88/116 (75.86%), Postives = 95/116 (81.90%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF D+ VQ DMK WPF V+   A +P + V YKGE K F  EEISSMVL KM+EIAEAYLG T+ NAVVTVPAYFNDSQRQ TKDAG IAGLNV+RIINEPTAAAIAYGL
Sbjct:   71 KRLIGRRFDDSVVQSDMKHWPFTVV-NDAGRPKVQVEYKGETKSFYPEEISSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQGTKDAGTIAGLNVLRIINEPTAAAIAYGL 185          

HSP 2 Score: 132.88 bits (333), Expect = 2.342e-75
Identity = 62/69 (89.86%), Postives = 67/69 (97.10%), Query Frame = 1
Query:  124 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDA+
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAK 71          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.055e-75
Identity = 88/116 (75.86%), Postives = 97/116 (83.62%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+FSD  +Q DMK WPFKVIA   DKP + V +KGE K F+ EE+SSMVL+KM+E AEAYLG TI NAV+TVPAYFNDSQRQATKDAG IA LNV RIINEPTAAAIAYGL
Sbjct:   69 KRLIGRKFSDPVIQSDMKHWPFKVIAKEGDKPHLQVEFKGEVKTFSPEEVSSMVLLKMKETAEAYLGKTINNAVITVPAYFNDSQRQATKDAGAIAKLNVQRIINEPTAAAIAYGL 184          

HSP 2 Score: 127.872 bits (320), Expect = 3.055e-75
Identity = 59/66 (89.39%), Postives = 64/66 (96.97%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            +IGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV F +TERLIGDAAKNQVAMNPTNT+FDA+
Sbjct:    4 SIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFNETERLIGDAAKNQVAMNPTNTIFDAK 69          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 8.839e-75
Identity = 87/116 (75.00%), Postives = 97/116 (83.62%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF D+ VQ DMK WPFKVI+    +P + V YKGE K F  EEISSMVL+KM+EIAEAYLG +I NAV+TVPAYFNDSQRQ TKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct:   71 KRLIGRRFEDSVVQADMKHWPFKVISD-GGRPRLEVEYKGEAKNFYPEEISSMVLVKMKEIAEAYLGKSINNAVITVPAYFNDSQRQRTKDAGTISGLNVLRIINEPTAAAIAYGL 185          

HSP 2 Score: 130.954 bits (328), Expect = 8.839e-75
Identity = 60/69 (86.96%), Postives = 67/69 (97.10%), Query Frame = 1
Query:  124 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNPTNT+FDA+
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAK 71          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.153e-74
Identity = 91/116 (78.45%), Postives = 100/116 (86.21%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F+D  VQ DMK +PFKVI   A KP+I V +KGEEKQF  EEISSMVL KMRE AE+YLG T+ NAVVTVPAYFNDSQRQATKDAG+IAGLNV+RIINEPTAAAIAYGL
Sbjct:   69 KRLIGRKFADPEVQSDMKHFPFKVI-DKAGKPVISVEFKGEEKQFTPEEISSMVLTKMRETAESYLGGTVNNAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183          

HSP 2 Score: 125.561 bits (314), Expect = 1.153e-74
Identity = 58/67 (86.57%), Postives = 65/67 (97.01%), Query Frame = 1
Query:  130 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            PAIGIDLGTTYSCVG+++ DR+EIIANDQGNRTTPS+V FTDTERLIGDAAKNQVAMNP+NTVFDA+
Sbjct:    3 PAIGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPSNTVFDAK 69          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.153e-74
Identity = 88/116 (75.86%), Postives = 97/116 (83.62%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF D  VQ DMK WPF+VI   + +P + V YKGE K F  EEISSMVL+KM+EIAEAYLG T+ NAVVTVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct:   71 KRLIGRRFDDGVVQSDMKHWPFEVI-NDSTRPKLQVEYKGETKSFYPEEISSMVLVKMKEIAEAYLGKTVNNAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185          

HSP 2 Score: 129.028 bits (323), Expect = 1.153e-74
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 1
Query:  124 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDA+
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPCNTVFDAK 71          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.153e-74
Identity = 85/116 (73.28%), Postives = 97/116 (83.62%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F DA+VQ DMK WPF+V++    KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  +++AV+TVPAYFNDSQRQATKDAG I GLNV+RIINEPTAAAIAYGL
Sbjct:   72 KRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGL 186          

HSP 2 Score: 132.494 bits (332), Expect = 1.153e-74
Identity = 62/68 (91.18%), Postives = 66/68 (97.06%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNT+FDA+
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAK 72          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.504e-74
Identity = 85/116 (73.28%), Postives = 96/116 (82.76%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F DA+VQ DMK WPF+V++    KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  + +AV+TVPAYFNDSQRQATKDAG I GLNV+RIINEPTAAAIAYGL
Sbjct:   72 KRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGL 186          

HSP 2 Score: 132.494 bits (332), Expect = 1.504e-74
Identity = 62/68 (91.18%), Postives = 66/68 (97.06%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNT+FDA+
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAK 72          
The following BLAST results are available for this feature:
BLAST of FC875341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_PYRSA4.759e-7675.00Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP70_ONCTS8.095e-7675.86Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP70_ACHKL1.796e-7572.41Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HSP7C_CHICK2.342e-7575.86Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HS7C2_DICDI3.055e-7575.86Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP7C_ICTPU8.839e-7575.00Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP72_PARBA1.153e-7478.45Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP70_ONCMY1.153e-7475.86Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
HSP72_RAT1.153e-7473.28Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_HUMAN1.504e-7473.28Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionC31402H03EF CTVClemen1 Citrus clementina cDNA clone C31402H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875341 ID=FC875341; Name=FC875341; organism=Citrus clementina; type=EST; length=674bp
GAGAACCCATACAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTT
TTTCTTCGCTGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAG
TTTTGATAATGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTG
GGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGAT
TATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCA
CCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCCATG
AACCCCACGAACACCGTCTTTGATGCAAGAGGTTGATTGGTAGGAGATTC
AGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGAT
TGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAG
AGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATG
CGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGT
TACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATG
CCGGTGTCATTGCTGGGCTTAATGTGATGCGTATCATCAACGAGCCCACT
GCTGCTGCCATTGCTTATGGCCTT
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