FC875341

Overview
NameFC875341
Unique NameFC875341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP75_KLUMA (Heat shock protein SSB OS=Kluyveromyces marxianus GN=SSB PE=3 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 1.473e-62
Identity = 83/116 (71.55%), Postives = 94/116 (81.03%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF + SVQ DMK WPFKVI      P+I V Y GE K F+ +EISSMVL KM+EIAEA +G  ++ AVVTVPAYFND+QRQATKDAG IAGLNV+RIINEPTAAAIAYG+
Sbjct:   73 KRLIGRRFDEESVQSDMKTWPFKVIDSNG-APLIEVEYLGETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAYGV 187          

HSP 2 Score: 100.523 bits (249), Expect = 1.473e-62
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCV  +++  VEIIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDA+
Sbjct:    9 AIGIDLGTTYSCVATYENS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPKNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 2.503e-62
Identity = 82/117 (70.09%), Postives = 93/117 (79.49%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  VQ D KL P++++     KP I V  K GE K F+ EEIS+M+L KM+E AEAYLG  IK+AVVTVPAYFND+QRQATKDAGVIAGLNV RIINEPTAAAIAYGL
Sbjct:  102 KRLIGRKFEDKEVQKDRKLVPYQIV-NKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGL 217          

HSP 2 Score: 109.383 bits (272), Expect = 2.503e-62
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV+++  VEIIANDQGNR TPS+VGFTD+ERLIG+AAKNQ A+NP  TVFD +
Sbjct:   35 GSVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTVFDVK 102          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.503e-62
Identity = 82/117 (70.09%), Postives = 93/117 (79.49%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  VQ D KL P++++     KP I V  K GE K F+ EEIS+M+L KM+E AEAYLG  IK+AVVTVPAYFND+QRQATKDAGVIAGLNV RIINEPTAAAIAYGL
Sbjct:  102 KRLIGRKFEDKEVQKDRKLVPYQIV-NKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGL 217          

HSP 2 Score: 109.383 bits (272), Expect = 2.503e-62
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV+++  VEIIANDQGNR TPS+VGFTD+ERLIG+AAKNQ A+NP  TVFD +
Sbjct:   35 GSVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTVFDVK 102          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 4.256e-62
Identity = 84/117 (71.79%), Postives = 96/117 (82.05%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  VQ DMKL P+K+++    KP I V  K GE K F+ EEIS+M+L KM+E AEA+LG TIK+AVVTVPAYFND+QRQATKDAGVIAGLNV RIINEPTAAAIAYGL
Sbjct:  103 KRLIGRKFEDKEVQRDMKLVPYKIVSKDG-KPYIQVKIKDGEVKVFSPEEISAMILTKMKETAEAFLGKTIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGL 218          

HSP 2 Score: 103.605 bits (257), Expect = 4.256e-62
Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV+++  VEIIANDQGNR TPS+V FTD ERLIG+AAKN  A+NP  T+FD +
Sbjct:   36 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDNERLIGEAAKNLAAVNPERTIFDVK 103          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: BIP2_MAIZE (Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 9.435e-62
Identity = 83/117 (70.94%), Postives = 94/117 (80.34%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F+D  VQ DMKL P+K+I     KP I V  K GE K F+ EEIS+M+L KM++ AEAYLG  I +AVVTVPAYFND+QRQATKDAGVIAGLNV RIINEPTAAAIAYGL
Sbjct:  100 KRLIGRKFADKEVQRDMKLVPYKII-NKDGKPYIQVKIKDGENKVFSPEEISAMILGKMKDTAEAYLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGL 215          

HSP 2 Score: 106.686 bits (265), Expect = 9.435e-62
Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV+++  VEIIANDQGNR TPS+V FTD+ERLIG+AAKNQ A+NP  T+FD +
Sbjct:   33 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVK 100          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 9.435e-62
Identity = 82/116 (70.69%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR ++D SVQ D+K  PFKVI     KP I V+   + K FA EEIS+MVL+KM+E AEAYLG  + +AVVTVPAYFND+QRQATKDAG IAGLNVMRIINEPTAAAIAYGL
Sbjct:   98 KRLIGRTWNDPSVQQDIKYLPFKVIEKKT-KPYIEVDIGDQMKTFAPEEISAMVLVKMKETAEAYLGRKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGL 212          

HSP 2 Score: 106.301 bits (264), Expect = 9.435e-62
Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  +GIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYV FT + ERLIGDAAKNQ+  NP NTVFDA+
Sbjct:   30 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAK 98          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.435e-62
Identity = 76/115 (66.09%), Postives = 94/115 (81.74%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYG 671
            KRLIGRRF D  VQ DMKL P+K+++   +KP + V  KGEEK ++ EEIS+M+L +M+EIAEA LG T+ +AVVT PAYFND+QR ATKDAGVIAGL V+R+INEPTAAA+AYG
Sbjct:   99 KRLIGRRFDDEEVQRDMKLLPYKIVS-KNNKPYVVVKVKGEEKTYSPEEISAMILGRMKEIAEASLGKTVTHAVVTCPAYFNDAQRAATKDAGVIAGLEVLRVINEPTAAALAYG 212          

HSP 2 Score: 107.842 bits (268), Expect = 9.435e-62
Identity = 50/71 (70.42%), Postives = 58/71 (81.69%), Query Frame = 1
Query:  118 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            K  G  IGIDLGTTYSCVGV++  +VEII NDQGNR TPSYV FT+TERLIG+AAKNQ  +NP NT+FD +
Sbjct:   29 KDYGSVIGIDLGTTYSCVGVFKKGKVEIIPNDQGNRITPSYVAFTETERLIGEAAKNQATLNPENTIFDIK 99          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: BIP3_MAIZE (Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.230e-61
Identity = 83/117 (70.94%), Postives = 93/117 (79.49%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  VQ DMKL P+K+I     KP I V  K GE K F+ EEIS+M+L KM++ AEAYLG  I +AVVTVPAYFND+QRQATKDAGVIAGLNV RIINEPTAAAIAYGL
Sbjct:  100 KRLIGRKFQDKEVQRDMKLVPYKII-NKDGKPYIQVKIKDGENKVFSPEEISAMILGKMKDTAEAYLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGL 215          

HSP 2 Score: 106.686 bits (265), Expect = 1.230e-61
Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV+++  VEIIANDQGNR TPS+V FTD+ERLIG+AAKNQ A+NP  T+FD +
Sbjct:   33 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVK 100          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP7D_CAEEL (Heat shock 70 kDa protein D OS=Caenorhabditis elegans GN=hsp-4 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 1.230e-61
Identity = 77/116 (66.38%), Postives = 96/116 (82.76%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR +++ +VQ D+K WPFK++   ++KP + V    E KQF  EE+S+MVL KM++IAE+YLG  +KNAVVTVPAYFND+Q+QATKDAG IAGLNV+RIINEPTAAAIAYGL
Sbjct:   99 KRLIGRFYNEKTVQQDIKHWPFKIV-DKSNKPNVEVKVGSETKQFTPEEVSAMVLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGLNVVRIINEPTAAAIAYGL 213          

HSP 2 Score: 103.99 bits (258), Expect = 1.230e-61
Identity = 51/70 (72.86%), Postives = 59/70 (84.29%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT--DTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYV F+    ERLIGDAAKNQ+ +NP NT+FDA+
Sbjct:   30 GTIIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPENTIFDAK 99          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP7C_DROME (Heat shock 70 kDa protein cognate 3 OS=Drosophila melanogaster GN=Hsc70-3 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.230e-61
Identity = 81/116 (69.83%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR +SD +VQ D+K +PFKV+   + KP I V+     K FA EEIS+MVL KM+E AEAYLG  + +AVVTVPAYFND+QRQATKDAGVIAGL VMRIINEPTAAAIAYGL
Sbjct:   97 KRLIGREWSDTNVQHDIKFFPFKVVEKNS-KPHISVDTSQGAKVFAPEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYGL 211          

HSP 2 Score: 108.612 bits (270), Expect = 1.230e-61
Identity = 54/69 (78.26%), Postives = 59/69 (85.51%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYV FT D ERLIGDAAKNQ+  NP NTVFDA+
Sbjct:   29 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVFDAK 97          
The following BLAST results are available for this feature:
BLAST of FC875341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP75_KLUMA1.473e-6271.55Heat shock protein SSB OS=Kluyveromyces marxianus ... [more]
BIP2_ARATH2.503e-6270.09Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
BIP1_ARATH2.503e-6270.09Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
BIP_SOLLC4.256e-6271.79Luminal-binding protein OS=Solanum lycopersicum PE... [more]
BIP2_MAIZE9.435e-6270.94Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=... [more]
GRP78_XENLA9.435e-6270.6978 kDa glucose-regulated protein OS=Xenopus laevis... [more]
BIP2_DICDI9.435e-6266.09Luminal-binding protein 2 OS=Dictyostelium discoid... [more]
BIP3_MAIZE1.230e-6170.94Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=... [more]
HSP7D_CAEEL1.230e-6166.38Heat shock 70 kDa protein D OS=Caenorhabditis eleg... [more]
HSP7C_DROME1.230e-6169.83Heat shock 70 kDa protein cognate 3 OS=Drosophila ... [more]

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Properties
Property NameValue
Genbank descriptionC31402H03EF CTVClemen1 Citrus clementina cDNA clone C31402H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875341 ID=FC875341; Name=FC875341; organism=Citrus clementina; type=EST; length=674bp
GAGAACCCATACAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTT
TTTCTTCGCTGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAG
TTTTGATAATGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTG
GGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGAT
TATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCA
CCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCCATG
AACCCCACGAACACCGTCTTTGATGCAAGAGGTTGATTGGTAGGAGATTC
AGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGAT
TGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAG
AGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATG
CGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGT
TACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATG
CCGGTGTCATTGCTGGGCTTAATGTGATGCGTATCATCAACGAGCCCACT
GCTGCTGCCATTGCTTATGGCCTT
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