FC875341

Overview
NameFC875341
Unique NameFC875341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.581e-60
Identity = 74/116 (63.79%), Postives = 94/116 (81.03%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIG ++ D SVQ D+K +P+KV      KP++ V  KGE+K +  EEIS+M+L KM++IA+ YLG  + +AVVTVPAYFND+QRQATKDAG+IAGLNV+RI+NEPTAAAIAYGL
Sbjct:  104 KRLIGLKYKDESVQRDIKHFPYKV-KNKDGKPVVVVETKGEKKTYTPEEISAMILTKMKDIAQDYLGKKVTHAVVTVPAYFNDAQRQATKDAGIIAGLNVLRIVNEPTAAAIAYGL 218          

HSP 2 Score: 104.76 bits (260), Expect = 6.581e-60
Identity = 49/68 (72.06%), Postives = 56/68 (82.35%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV +  RVEI+ANDQG+R TPSYV FT+ ERL+GDAAKNQ A NP NT+FD +
Sbjct:   37 GTVIGIDLGTTYSCVGVMKGGRVEILANDQGSRITPSYVAFTEDERLVGDAAKNQAANNPFNTIFDIK 104          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.232e-59
Identity = 72/116 (62.07%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIG +++D +VQ D+K  P+ V+    +KP + V  KGE+K+F  EE+S M+L KM++IAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLN++RI+NEPTAAAIAYGL
Sbjct:  118 KRLIGLQYNDPTVQRDIKHLPYTVV-NKGNKPYVEVTVKGEKKEFTPEEVSGMILGKMKQIAEDYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLNILRIVNEPTAAAIAYGL 232          

HSP 2 Score: 103.99 bits (258), Expect = 3.232e-59
Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCV V ++ + EI+AN+QGNR TPSYV FTD ERLIGDAAKNQ A NP NT+FD +
Sbjct:   51 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVSFTDDERLIGDAAKNQAASNPKNTIFDIK 118          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 7.165e-59
Identity = 72/116 (62.07%), Postives = 88/116 (75.86%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIG RF D  +Q ++K  P+KV      +P++     GE K F AEEIS+M+L KM++IAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGL V+RI+NEPTAAAIAYGL
Sbjct:  107 KRLIGHRFDDKVIQKEIKHLPYKV-KDQDGRPVVEAKVNGELKTFTAEEISAMILGKMKQIAEDYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLEVLRIVNEPTAAAIAYGL 221          

HSP 2 Score: 109.768 bits (273), Expect = 7.165e-59
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV +  RVEII NDQGNR TPSYV FT+ ERL+GDAAKNQ+A NPTNT+FD +
Sbjct:   40 GTVIGIDLGTTYSCVGVMKAGRVEIIPNDQGNRITPSYVAFTEDERLVGDAAKNQIASNPTNTIFDIK 107          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.218e-58
Identity = 73/116 (62.93%), Postives = 88/116 (75.86%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  VQ D K +P+KV+     KP + V+     K    EE+S+MVL KM+EIAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV+R++NEPTAAAIAYGL
Sbjct:  116 KRLIGRKFDDKDVQKDAKHFPYKVV-NKDGKPHVKVDVNQTPKTLTPEEVSAMVLGKMKEIAEGYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRVVNEPTAAAIAYGL 230          

HSP 2 Score: 106.301 bits (264), Expect = 1.218e-58
Identity = 49/68 (72.06%), Postives = 55/68 (80.88%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV Q+ +VEI+ NDQGNR TPSYV FTD ERL+GDAAKNQ A NP  T+FD +
Sbjct:   49 GTVIGIDLGTTYSCVGVMQNGKVEILVNDQGNRITPSYVAFTDEERLVGDAAKNQYAANPRRTIFDIK 116          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.218e-58
Identity = 73/116 (62.93%), Postives = 88/116 (75.86%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  VQ D K +P+KV+     KP + V+     K    EE+S+MVL KM+EIAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV+R++NEPTAAAIAYGL
Sbjct:  116 KRLIGRKFDDKDVQKDAKHFPYKVV-NKDGKPHVKVDVNQTPKTLTPEEVSAMVLGKMKEIAEGYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRVVNEPTAAAIAYGL 230          

HSP 2 Score: 106.301 bits (264), Expect = 1.218e-58
Identity = 49/68 (72.06%), Postives = 55/68 (80.88%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV Q+ +VEI+ NDQGNR TPSYV FTD ERL+GDAAKNQ A NP  T+FD +
Sbjct:   49 GTVIGIDLGTTYSCVGVMQNGKVEILVNDQGNRITPSYVAFTDEERLVGDAAKNQYAANPRRTIFDIK 116          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.218e-58
Identity = 73/116 (62.93%), Postives = 88/116 (75.86%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  VQ D K +P+KV+     KP + V+     K    EE+S+MVL KM+EIAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV+R++NEPTAAAIAYGL
Sbjct:  116 KRLIGRKFDDKDVQKDAKHFPYKVV-NKDGKPHVKVDVNQTPKTLTPEEVSAMVLGKMKEIAEGYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRVVNEPTAAAIAYGL 230          

HSP 2 Score: 106.301 bits (264), Expect = 1.218e-58
Identity = 49/68 (72.06%), Postives = 55/68 (80.88%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV Q+ +VEI+ NDQGNR TPSYV FTD ERL+GDAAKNQ A NP  T+FD +
Sbjct:   49 GTVIGIDLGTTYSCVGVMQNGKVEILVNDQGNRITPSYVAFTDEERLVGDAAKNQYAANPRRTIFDIK 116          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_ASHGO (78 kDa glucose-regulated protein homolog OS=Ashbya gossypii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.518e-58
Identity = 75/119 (63.03%), Postives = 92/119 (77.31%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADK---PMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIG +++D +VQ ++K  PF+V+    DK   P + V  KGE K F  EEIS MVL KM++IAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLN++RI+NEPTAAAIAYGL
Sbjct:  114 KRLIGLKYNDKTVQREIKHLPFEVV----DKNGMPAVAVTVKGERKLFTPEEISGMVLGKMKQIAEEYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLNILRIVNEPTAAAIAYGL 228          

HSP 2 Score: 103.99 bits (258), Expect = 3.518e-58
Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCV + ++ + EI+AN+QGNR TPSYV FTD ERLIGDAAKNQVA NP NT+FD +
Sbjct:   47 GTVIGIDLGTTYSCVALMRNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVANNPKNTIFDIK 114          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP7C_TRYBB (Heat shock cognate HSP70 protein OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.017e-57
Identity = 74/116 (63.79%), Postives = 86/116 (74.14%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+FSD+ VQ DMK WPFKV  G     ++ V + GE      E+IS+ VL  ++  AE+YLG  +  AVVTVPAYFNDSQRQATKDAG IAGL V+RIINEPTAAAIAYGL
Sbjct:   71 KRLIGRKFSDSVVQSDMKHWPFKVEEGEKGGAVMRVEHLGEGMLLQPEQISARVLAYLKSCAESYLGKQVAKAVVTVPAYFNDSQRQATKDAGTIAGLEVLRIINEPTAAAIAYGL 186          

HSP 2 Score: 102.449 bits (254), Expect = 1.017e-57
Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCVGVWQ++RVEIIANDQGNRTTPSYV F + E L+GDAAK+  A      +FDA+
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFVNNEVLVGDAAKSHAARGSNGVIFDAK 71          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_DEBHA (78 kDa glucose-regulated protein homolog OS=Debaryomyces hansenii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 8.483e-57
Identity = 71/116 (61.21%), Postives = 89/116 (76.72%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIG +++D  VQ ++K  P+K+      KP++ V +  E K F+ EEIS M+L KM+ IAE Y+G  I +AVVTVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAAIAYGL
Sbjct:  116 KRLIGLKYNDKMVQKEIKHLPYKIDKKDG-KPVVKVEFNDETKTFSPEEISGMILTKMKSIAEEYMGKKITHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGL 230          

HSP 2 Score: 102.449 bits (254), Expect = 8.483e-57
Identity = 49/68 (72.06%), Postives = 55/68 (80.88%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV ++ +VEI+ANDQGNR TPSYV FT  ERLIGDAAKNQ + N  NTVFD +
Sbjct:   49 GTVIGIDLGTTYSCVGVMKNGKVEILANDQGNRITPSYVAFTPEERLIGDAAKNQASSNVENTVFDIK 116          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 6.423e-54
Identity = 71/117 (60.68%), Postives = 90/117 (76.92%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMR-IINEPTAAAIAYGL 674
            KRLIGR+F D  V  D  L P++++     KP I V  K ++  FA E+IS+MVL KM+EIA+++LG  +KNAVVTVPAYFND+QRQATKDAG IAGLN++R IIN+PTAAA+AY L
Sbjct:   95 KRLIGRKFDDQEVVKDRSLLPYEIVNNQG-KPNIKVQIKDKDTTFAPEQISAMVLEKMKEIAQSFLGKPVKNAVVTVPAYFNDAQRQATKDAGTIAGLNIVRIIINQPTAAALAYAL 210          

HSP 2 Score: 96.6709 bits (239), Expect = 6.423e-54
Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 1
Query:  124 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            EGP IGIDLGTTYSCVGV+++ RVEI+ N+ GNR TPSYV F D ER +G+AAK +  ++PT TVFD +
Sbjct:   27 EGPVIGIDLGTTYSCVGVFKNGRVEILNNELGNRITPSYVSFVDGERKVGEAAKLEATVHPTQTVFDVK 95          
The following BLAST results are available for this feature:
BLAST of FC875341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_YARLI6.581e-6063.7978 kDa glucose-regulated protein homolog OS=Yarrow... [more]
GRP78_KLULA3.232e-5962.0778 kDa glucose-regulated protein homolog OS=Kluyve... [more]
GRP78_PICAN7.165e-5962.0778 kDa glucose-regulated protein homolog OS=Pichia... [more]
GRP78_ASPNG1.218e-5862.9378 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPKA1.218e-5862.9378 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW1.218e-5862.9378 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASHGO3.518e-5863.0378 kDa glucose-regulated protein homolog OS=Ashbya... [more]
HSP7C_TRYBB1.017e-5763.79Heat shock cognate HSP70 protein OS=Trypanosoma br... [more]
GRP78_DEBHA8.483e-5761.2178 kDa glucose-regulated protein homolog OS=Debary... [more]
GRP78_PLAFO6.423e-5460.6878 kDa glucose-regulated protein homolog OS=Plasmo... [more]

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Properties
Property NameValue
Genbank descriptionC31402H03EF CTVClemen1 Citrus clementina cDNA clone C31402H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875341 ID=FC875341; Name=FC875341; organism=Citrus clementina; type=EST; length=674bp
GAGAACCCATACAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTT
TTTCTTCGCTGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAG
TTTTGATAATGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTG
GGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGAT
TATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCA
CCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCCATG
AACCCCACGAACACCGTCTTTGATGCAAGAGGTTGATTGGTAGGAGATTC
AGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGAT
TGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAG
AGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATG
CGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGT
TACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATG
CCGGTGTCATTGCTGGGCTTAATGTGATGCGTATCATCAACGAGCCCACT
GCTGCTGCCATTGCTTATGGCCTT
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