FC875341

Overview
NameFC875341
Unique NameFC875341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFT (Chaperone protein dnaK OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.007e-41
Identity = 67/116 (57.76%), Postives = 83/116 (71.55%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F DA VQ D+ L P+K+         +      + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYGL
Sbjct:   70 KRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGL 182          

HSP 2 Score: 65.855 bits (159), Expect = 1.007e-41
Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SC+ + +  +  +I N +G+RTTPS V +T D E L+G AAK Q   NP NT +
Sbjct:    2 GKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFY 67          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFM (Chaperone protein dnaK OS=Xylella fastidiosa (strain M12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.007e-41
Identity = 67/116 (57.76%), Postives = 83/116 (71.55%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F DA VQ D+ L P+K+         +      + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYGL
Sbjct:   70 KRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGL 182          

HSP 2 Score: 65.855 bits (159), Expect = 1.007e-41
Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SC+ + +  +  +I N +G+RTTPS V +T D E L+G AAK Q   NP NT +
Sbjct:    2 GKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFY 67          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_XYLF2 (Chaperone protein dnaK OS=Xylella fastidiosa (strain M23) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.007e-41
Identity = 67/116 (57.76%), Postives = 83/116 (71.55%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F DA VQ D+ L P+K+         +      + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYGL
Sbjct:   70 KRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGL 182          

HSP 2 Score: 65.855 bits (159), Expect = 1.007e-41
Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SC+ + +  +  +I N +G+RTTPS V +T D E L+G AAK Q   NP NT +
Sbjct:    2 GKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFY 67          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_STRMK (Chaperone protein dnaK OS=Stenotrophomonas maltophilia (strain K279a) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.007e-41
Identity = 66/116 (56.90%), Postives = 85/116 (73.28%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F+DA VQ D+   P+ ++A       +  +   + K+ A +EIS+ VL KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYGL
Sbjct:   70 KRLIGRKFTDAEVQKDIAHVPYSILAHDNGDAWVATS---DGKKMAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGL 182          

HSP 2 Score: 67.0106 bits (162), Expect = 1.007e-41
Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SCV +    +  +I N +G+RTTPS V +T D E L+G +AK Q   NP NT +
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGGKARVIENSEGDRTTPSIVAYTKDGEVLVGASAKRQAVTNPKNTFY 67          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_PHOLL (Chaperone protein dnaK OS=Photorhabdus luminescens subsp. laumondii GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.007e-41
Identity = 65/116 (56.03%), Postives = 83/116 (71.55%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF D   Q D+ + P+K+IA       + V    ++++ A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGL
Sbjct:   70 KRLIGRRFQDEEAQRDVAIMPYKIIAADNGDAWLEV----KDQKMAPPQVSAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGL 181          

HSP 2 Score: 67.3958 bits (163), Expect = 1.007e-41
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SCV +       ++ N +G+RTTPS + +T D E L+G  AK Q   NP NT+F
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTTARVLENSEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLF 67          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_PROVI (Chaperone protein dnaK OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.007e-41
Identity = 60/116 (51.72%), Postives = 81/116 (69.83%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KR +GR+F +  V  + K+ P+ V+    +        K  +K ++ +EIS+M+L KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGL
Sbjct:   70 KRFVGRKFDE--VPNEKKIAPYAVVNEGGE-----ARVKINDKTYSPQEISAMILQKMKQTAEDFLGEKVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGL 178          

HSP 2 Score: 77.7962 bits (190), Expect = 1.007e-41
Identity = 39/69 (56.52%), Postives = 47/69 (68.12%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTT SCV V Q  +  +I N +GNRTTPS V FT + +RL+G AAK Q   NPTNT+F  +
Sbjct:    2 GKIIGIDLGTTNSCVAVMQGTQPTVIENSEGNRTTPSMVAFTKNGDRLVGQAAKRQAITNPTNTIFSIK 70          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_BRAJA (Chaperone protein dnaK OS=Bradyrhizobium japonicum GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.007e-41
Identity = 62/116 (53.45%), Postives = 84/116 (72.41%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRR+ D  V+ D KL P+K++        +    + + + ++  ++S+ +L KM+E AEA+LG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGL
Sbjct:   70 KRLIGRRYDDPMVEKDKKLVPYKIVKASNGDAWV----EADGQTYSPSQVSAFILQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGL 181          

HSP 2 Score: 67.0106 bits (162), Expect = 1.007e-41
Identity = 35/66 (53.03%), Postives = 39/66 (59.09%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SCV V      ++I N +G RTTPS V  TD  ERL+G  AK Q   NP  T F
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKNAKVIENSEGMRTTPSIVAVTDDGERLVGQPAKRQAVTNPERTFF 67          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_BEII9 (Chaperone protein dnaK OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.007e-41
Identity = 63/116 (54.31%), Postives = 82/116 (70.69%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR F D   + D+ L P+K+   P     +    + + K ++  +IS+ +L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGL
Sbjct:   70 KRLIGRTFEDPMTKKDIGLVPYKITKAPNGDAWV----EADGKPYSPSQISAFILQKMKETAESYLGQPVSQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGL 181          

HSP 2 Score: 67.3958 bits (163), Expect = 1.007e-41
Identity = 36/66 (54.55%), Postives = 41/66 (62.12%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SCV V +    ++I N +G RTTPS V FTD  ERL+G  AK Q   NP  T F
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGTTPKVIENAEGARTTPSIVAFTDDGERLVGQPAKRQGVTNPERTFF 67          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_NITWN (Chaperone protein dnaK OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.008e-41
Identity = 66/117 (56.41%), Postives = 86/117 (73.50%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVI-AGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRR+ D +V+ D +L P+K+  AG  D  +     + + K ++  +IS+  L KM+E AEA+LG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGL
Sbjct:   70 KRLIGRRYDDPTVEKDKQLVPYKIAKAGNGDAWV-----EADGKTYSPSQISAFTLQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGL 181          

HSP 2 Score: 67.781 bits (164), Expect = 1.008e-41
Identity = 35/66 (53.03%), Postives = 41/66 (62.12%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SCV V      ++I N +G RTTPS V F+D  ERL+G  AK Q   NP  T+F
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKTPKVIENAEGMRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTIF 67          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_RICAH (Chaperone protein dnaK OS=Rickettsia akari (strain Hartford) GN=dnaK PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.008e-41
Identity = 59/115 (51.30%), Postives = 80/115 (69.57%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYG 671
            KRLIGR F+D  V+ D  + P+ ++        +    + +  +++  +IS+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYG
Sbjct:   69 KRLIGRNFTDPMVKKDQDIVPYNIVKADNGDAWV----EADSNKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYG 179          

HSP 2 Score: 72.7886 bits (177), Expect = 1.008e-41
Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SCV V +    ++I N +G RTTPS + F + E+L+G +AK Q   NP+NT++
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGKEPKVIENAEGERTTPSIIAFANGEKLVGQSAKRQAVTNPSNTIY 66          
The following BLAST results are available for this feature:
BLAST of FC875341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_XYLFT1.007e-4157.76Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XYLFM1.007e-4157.76Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XYLF21.007e-4157.76Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_STRMK1.007e-4156.90Chaperone protein dnaK OS=Stenotrophomonas maltoph... [more]
DNAK_PHOLL1.007e-4156.03Chaperone protein dnaK OS=Photorhabdus luminescens... [more]
DNAK_PROVI1.007e-4151.72Chaperone protein dnaK OS=Prosthecochloris vibriof... [more]
DNAK_BRAJA1.007e-4153.45Chaperone protein dnaK OS=Bradyrhizobium japonicum... [more]
DNAK_BEII91.007e-4154.31Chaperone protein dnaK OS=Beijerinckia indica subs... [more]
DNAK_NITWN1.008e-4156.41Chaperone protein dnaK OS=Nitrobacter winogradskyi... [more]
DNAK_RICAH1.008e-4151.30Chaperone protein dnaK OS=Rickettsia akari (strain... [more]

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Properties
Property NameValue
Genbank descriptionC31402H03EF CTVClemen1 Citrus clementina cDNA clone C31402H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875341 ID=FC875341; Name=FC875341; organism=Citrus clementina; type=EST; length=674bp
GAGAACCCATACAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTT
TTTCTTCGCTGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAG
TTTTGATAATGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTG
GGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGAT
TATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCA
CCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCCATG
AACCCCACGAACACCGTCTTTGATGCAAGAGGTTGATTGGTAGGAGATTC
AGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGAT
TGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAG
AGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATG
CGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGT
TACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATG
CCGGTGTCATTGCTGGGCTTAATGTGATGCGTATCATCAACGAGCCCACT
GCTGCTGCCATTGCTTATGGCCTT
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