FC875341

Overview
NameFC875341
Unique NameFC875341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_BURM7 (Chaperone protein dnaK OS=Burkholderia mallei (strain NCTC 10247) GN=dnaK PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.090e-40
Identity = 68/116 (58.62%), Postives = 82/116 (70.69%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF +  VQ D+ L P+ +I   AD     V   GE+   A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+A+GL
Sbjct:   70 KRLIGRRFEEKEVQKDIGLMPYAIIK--ADNGDAWVEAHGEK--LAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAFGL 181          

HSP 2 Score: 67.3958 bits (163), Expect = 1.090e-40
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGF-TDTERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SCV + + ++V++I N +G RTTPS + +  D E L+G  AK Q   NP NT+F
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLF 67          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_POLNA (Chaperone protein dnaK OS=Polaromonas naphthalenivorans (strain CJ2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.090e-40
Identity = 64/116 (55.17%), Postives = 88/116 (75.86%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F++  VQ D+ L P+ ++  PAD     +  +G  K+ +A+++S+ +L KM++ AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+A+GL
Sbjct:   70 KRLIGRKFTEKEVQKDIGLMPYSIV--PADNGDAWIEVRG--KKLSAQQVSADILRKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAFGL 181          

HSP 2 Score: 63.5438 bits (153), Expect = 1.090e-40
Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGF-TDTERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SCV + + +   +I N +G RTTPS V +  D E L+G +AK Q   NP NT++
Sbjct:    2 GRIIGIDLGTTNSCVSIMEGNTPRVIENSEGARTTPSIVAYQEDGEVLVGASAKRQAVTNPKNTLY 67          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.236e-40
Identity = 84/124 (67.74%), Postives = 100/124 (80.65%), Query Frame = 3
Query:  303 PHEHRL*CKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            PH      KRLIGR+F+DA VQ D+K +PF V      KP I V Y+GE+K+F+ EEISSM+L KM+E+AE+YLG T+ +AVVTVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct:   61 PHNTVFDAKRLIGRKFADAEVQSDIKHFPFTVF-DKGGKPYIRVQYRGEDKEFSPEEISSMILTKMKEVAESYLGGTVTSAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 183          

HSP 2 Score: 129.028 bits (323), Expect = 2.187e-29
Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTDTERLIGD+AKNQVAMNP NTVFDA+
Sbjct:    4 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDSAKNQVAMNPHNTVFDAK 69          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_BURM1 (Chaperone protein dnaK OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=dnaK PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.420e-40
Identity = 67/116 (57.76%), Postives = 82/116 (70.69%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF +  VQ D+ L P+ +I   AD     V   G++   A  ++S+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+A+GL
Sbjct:   70 KRLIGRRFEEKEVQKDIGLMPYSIIK--ADNGDAWVEAHGQK--LAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAFGL 181          

HSP 2 Score: 67.781 bits (164), Expect = 1.420e-40
Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGF-TDTERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SCV V + ++V++I N +G RTTPS + +  D E L+G  AK Q   NP NT+F
Sbjct:    2 GKIIGIDLGTTNSCVAVMEGNQVKVIENSEGARTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLF 67          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_CYTH3 (Chaperone protein dnaK OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=dnaK PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.421e-40
Identity = 59/116 (50.86%), Postives = 84/116 (72.41%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KR +G++FS++  + D     +K+ AG  D P + +     ++Q+  +E+S+M+L KM+  AE YLG  +K AV+TVPAYFND++RQATK+AG IAGL V RIINEPTAAA+AYG+
Sbjct:   70 KRFMGKKFSESKSEADRAT--YKLEAGSNDTPRVRI----ADRQYTPQELSAMILQKMKTTAEEYLGHEVKEAVITVPAYFNDAERQATKEAGQIAGLEVKRIINEPTAAALAYGM 179          

HSP 2 Score: 70.0922 bits (170), Expect = 1.421e-40
Identity = 35/65 (53.85%), Postives = 41/65 (63.08%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTV 318
            G  IGIDLGTT SCV V +     +I N +G RTTPS V F +  ER +GD AK Q   NPTNT+
Sbjct:    2 GKIIGIDLGTTNSCVAVMEGSEAVVIPNSEGKRTTPSIVAFLENGERKVGDPAKRQAITNPTNTI 66          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTE (Chaperone protein dnaK OS=Chlorobium tepidum GN=dnaK PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.421e-40
Identity = 62/117 (52.99%), Postives = 82/117 (70.09%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVI-AGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KR +GR++ +  V  + KL  + V+  G   K  IG      +K ++ +EIS+M+L KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGL
Sbjct:   70 KRFMGRKYDE--VPNEKKLASYDVVNEGGYAKVKIG------DKTYSPQEISAMILQKMKQTAEDFLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRIINEPTAAALAYGL 178          

HSP 2 Score: 77.0258 bits (188), Expect = 1.421e-40
Identity = 39/69 (56.52%), Postives = 46/69 (66.67%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTT SCV V Q  +  +I N +G+RTTPS V FT T ERL+G AAK Q   NP NT+F  +
Sbjct:    2 GKIIGIDLGTTNSCVAVMQGTQPTVIENSEGSRTTPSMVAFTKTGERLVGQAAKRQAVTNPKNTIFSIK 70          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_BURXL (Chaperone protein dnaK OS=Burkholderia xenovorans (strain LB400) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.851e-40
Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF +  VQ D+ L P+K+I        + V     +++ A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+A+GL
Sbjct:   70 KRLIGRRFEEKEVQKDIGLMPYKIIKADNGDAWVEVR----DQKLAPPQISAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAFGL 181          

HSP 2 Score: 64.6994 bits (156), Expect = 1.851e-40
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGF-TDTERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SCV + + + V++I N +G RTTPS + +  D E L+G  AK Q   NP NT++
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNSVKVIENSEGARTTPSIIAYMEDGEILVGAPAKRQSVTNPKNTLY 67          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_BURCE (Chaperone protein dnaK OS=Burkholderia cepacia GN=dnaK PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.851e-40
Identity = 67/116 (57.76%), Postives = 81/116 (69.83%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF +  VQ D+ L P+ +I   AD     V   GE K  A  ++S+  + KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+A+GL
Sbjct:   70 KRLIGRRFEEKEVQKDIGLMPYSIIK--ADNGDAWVEGHGE-KLMAPPQVSAEAVRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAFGL 182          

HSP 2 Score: 68.1662 bits (165), Expect = 1.851e-40
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGF-TDTERLIGDAAKNQVAMNPTNTVF 321
            G  IGIDLGTT SCV + + ++V++I N +G RTTPS + +  D E L+G  AK Q   NP NT+F
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGNQVKVIENSEGTRTTPSIIAYMDDNEVLVGAPAKRQSVTNPKNTLF 67          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_LARHH (Chaperone protein dnaK OS=Laribacter hongkongensis (strain HLHK9) GN=dnaK PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.851e-40
Identity = 67/116 (57.76%), Postives = 84/116 (72.41%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF +  VQ D+ L PF ++   AD     ++ +G  K+ A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+A+G+
Sbjct:   70 KRLIGRRFEEKEVQKDIDLMPFSIVK--ADNGDAWIDVRG--KKLAPPQISAEVLRKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAFGM 181          

HSP 2 Score: 63.929 bits (154), Expect = 1.851e-40
Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGF-TDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTT SCV V ++ + ++I N +G RTTPS V +  D E L+G  AK Q   N  NT+F ++
Sbjct:    2 GKIIGIDLGTTNSCVAVLENGQPKVIENSEGARTTPSVVAYMEDGEILVGAPAKRQAVTNAKNTIFASK 70          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: DNAK_PELPB (Chaperone protein dnaK OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.851e-40
Identity = 58/116 (50.00%), Postives = 83/116 (71.55%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KR +GR++ +  +  + KL P+++I    +        K  +K ++ +E+S+M+L KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGL
Sbjct:   70 KRFMGRKYDE--INDEKKLAPYEIINEGGE-----ARVKINDKIYSPQEVSAMILQKMKQTAEDFLGEKVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGL 178          

HSP 2 Score: 75.0998 bits (183), Expect = 1.851e-40
Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTT SCV V Q  +  +I N +GNRTTPS +  T T +RL+G AAK Q   NP NT+F  +
Sbjct:    2 GKIIGIDLGTTNSCVSVMQGSQPTVIENSEGNRTTPSIIALTKTGDRLVGQAAKRQAITNPKNTIFSIK 70          
The following BLAST results are available for this feature:
BLAST of FC875341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BURM71.090e-4058.62Chaperone protein dnaK OS=Burkholderia mallei (str... [more]
DNAK_POLNA1.090e-4055.17Chaperone protein dnaK OS=Polaromonas naphthaleniv... [more]
HSP71_PUCGR1.236e-4067.74Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
DNAK_BURM11.420e-4057.76Chaperone protein dnaK OS=Burkholderia multivorans... [more]
DNAK_CYTH31.421e-4050.86Chaperone protein dnaK OS=Cytophaga hutchinsonii (... [more]
DNAK_CHLTE1.421e-4052.99Chaperone protein dnaK OS=Chlorobium tepidum GN=dn... [more]
DNAK_BURXL1.851e-4056.90Chaperone protein dnaK OS=Burkholderia xenovorans ... [more]
DNAK_BURCE1.851e-4057.76Chaperone protein dnaK OS=Burkholderia cepacia GN=... [more]
DNAK_LARHH1.851e-4057.76Chaperone protein dnaK OS=Laribacter hongkongensis... [more]
DNAK_PELPB1.851e-4050.00Chaperone protein dnaK OS=Pelodictyon phaeoclathra... [more]

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Properties
Property NameValue
Genbank descriptionC31402H03EF CTVClemen1 Citrus clementina cDNA clone C31402H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875341 ID=FC875341; Name=FC875341; organism=Citrus clementina; type=EST; length=674bp
GAGAACCCATACAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTT
TTTCTTCGCTGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAG
TTTTGATAATGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTG
GGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGAT
TATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCA
CCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCCATG
AACCCCACGAACACCGTCTTTGATGCAAGAGGTTGATTGGTAGGAGATTC
AGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGAT
TGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAG
AGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATG
CGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGT
TACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATG
CCGGTGTCATTGCTGGGCTTAATGTGATGCGTATCATCAACGAGCCCACT
GCTGCTGCCATTGCTTATGGCCTT
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