FC875341

Overview
NameFC875341
Unique NameFC875341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10212 contig Ccv1_Contig10212:1..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 8.047e-70
Identity = 84/116 (72.41%), Postives = 100/116 (86.21%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F+DA+VQ DMK WPF+V++    KP + V+Y+GE+K F  EEISSMVL KM+E AEAYLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIA+GL
Sbjct:   73 KRLIGRKFADATVQADMKHWPFQVVSEGC-KPKVRVSYRGEDKSFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAHGL 187          

HSP 2 Score: 117.472 bits (293), Expect = 8.047e-70
Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            A+GIDLGTTYSCVGV+Q  RVEI+ANDQGNRTTPSYV FTDTERL+GDAAK+Q A+NP NTVFDA+
Sbjct:    8 AVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPLNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 3.035e-69
Identity = 88/116 (75.86%), Postives = 97/116 (83.62%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  V  D K +PFKVI   A KP+I V YKGE K F+ EEISSMVL KM+EIAE YLG+T+K+AVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGL
Sbjct:   69 KRLIGRKFDDPEVINDAKHFPFKVI-DKAGKPVIQVEYKGETKTFSPEEISSMVLTKMKEIAEGYLGSTVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 183          

HSP 2 Score: 116.316 bits (290), Expect = 3.035e-69
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            A+GIDLGTTYSCV  + +DRVEIIANDQGNRTTPS+V FTDTERLIGDAAKNQ AMNP NTVFDA+
Sbjct:    4 AVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAK 69          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.731e-69
Identity = 81/116 (69.83%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR++ D  +  D+K WPFKV++    KP I V YK E KQFA EEISSMVL KM+E AE  LG T+ +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYGL
Sbjct:   68 KRLIGRKYDDPKIMEDVKHWPFKVVSD-GGKPKISVEYKEENKQFAPEEISSMVLTKMKETAEVILGTTVTDAVITVPAYFNDSQRQATKDAGRIAGLNVLRIINEPTAAALAYGL 182          

HSP 2 Score: 122.094 bits (305), Expect = 6.731e-69
Identity = 58/66 (87.88%), Postives = 62/66 (93.94%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSC GV+QH +VEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDA+
Sbjct:    3 AIGIDLGTTYSCFGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNTVFDAK 68          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.493e-68
Identity = 84/116 (72.41%), Postives = 92/116 (79.31%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  VQ DMK WPF+VI    DKP + V+YKGE K F  EEISSMVL KM+EIAEA LG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV+RIINEPT   IAY L
Sbjct:   71 KRLIGRKFGDPVVQSDMKHWPFQVI-NDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEADLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPT-RTIAYAL 184          

HSP 2 Score: 124.405 bits (311), Expect = 1.493e-68
Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDA+
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAK 71          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 161.77 bits (408), Expect = 4.317e-68
Identity = 85/116 (73.28%), Postives = 95/116 (81.90%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR F+D  VQGDMK +PFK+I     KP I V +KGE K F  E+ISSMVL KM+E AE+YLGA + +AVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGL
Sbjct:   69 KRLIGRNFNDPEVQGDMKHFPFKLIDVDG-KPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 183          

HSP 2 Score: 117.857 bits (294), Expect = 4.317e-68
Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            A+GIDLGTTYSCV  + +DRV+IIANDQGNRTTPS+VGFTDTERLIGDAAKNQ AMNP NTVFDA+
Sbjct:    4 AVGIDLGTTYSCVAHFSNDRVDIIANDQGNRTTPSFVGFTDTERLIGDAAKNQAAMNPANTVFDAK 69          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.628e-67
Identity = 85/116 (73.28%), Postives = 98/116 (84.48%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  VQGD+K +PFKV+   + KP I V +KGE K F  EEISSMVL KM+E AE++LG T+K+AV+TVPAYFNDSQRQATKDAG+IAGLNVMRIINEPTAAAIAYGL
Sbjct:   69 KRLIGRKFDDPEVQGDIKHFPFKVV-DKSGKPQIQVEFKGETKVFTPEEISSMVLTKMKETAESFLGTTVKDAVITVPAYFNDSQRQATKDAGLIAGLNVMRIINEPTAAAIAYGL 183          

HSP 2 Score: 110.923 bits (276), Expect = 1.628e-67
Identity = 53/66 (80.30%), Postives = 58/66 (87.88%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            A+GID GTTYSCV  + +DRVEIIANDQGNRTTPS+V FTDTERL GDAAKNQ AMNP NTVFDA+
Sbjct:    4 AVGIDGGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLSGDAAKNQAAMNPANTVFDAK 69          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 159.458 bits (402), Expect = 1.044e-66
Identity = 84/116 (72.41%), Postives = 94/116 (81.03%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR F+D  VQ DMK +PFK+I     KP I V +KGE K F  E+ISSMVL KM+E AE+YLGA + +AVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGL
Sbjct:   69 KRLIGRNFNDPEVQADMKHFPFKLIDVDG-KPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 183          

HSP 2 Score: 115.546 bits (288), Expect = 1.044e-66
Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            A+GIDLGTTYSCV  + +DRV+IIANDQGNRTTPS+V FTDTERLIGDAAKNQ AMNP+NTVFDA+
Sbjct:    4 AVGIDLGTTYSCVAHFANDRVDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPSNTVFDAK 69          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 1.775e-66
Identity = 81/116 (69.83%), Postives = 94/116 (81.03%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  VQ D+K +PFKV+     KP I V +KGE K F  EEISSMVL KM+E AE+Y+G  + +AV+TVPAYFNDSQRQATKDAG+IAGLNV+RIINEPTAAAIAYGL
Sbjct:   69 KRLIGRKFDDPEVQNDIKHFPFKVVE-KGGKPHIQVEFKGETKVFTPEEISSMVLTKMKETAESYMGGKVTDAVITVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183          

HSP 2 Score: 115.931 bits (289), Expect = 1.775e-66
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            A+GIDLGTTYSCV  + +DRVEIIANDQGNRTTPS+V FTDTERLIGDAAKNQ AMNP NTVFDA+
Sbjct:    4 AVGIDLGTTYSCVAHFVNDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAK 69          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 6.693e-66
Identity = 78/116 (67.24%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F+D  VQ DMK WPFKV++    KP + V YKG+ K F  +E+SSMVLIKM+EIAEAYLG  + NAV+TVP+Y   SQRQATKDAGV+AGLNV+ I+NEPTAAAIAY L
Sbjct:   73 KRLIGRKFNDTVVQADMKHWPFKVVSDEW-KPKVQVEYKGDNKTFFPDEVSSMVLIKMKEIAEAYLGHLVSNAVITVPSYLTASQRQATKDAGVLAGLNVLSIVNEPTAAAIAYDL 187          

HSP 2 Score: 116.701 bits (291), Expect = 6.693e-66
Identity = 55/69 (79.71%), Postives = 62/69 (89.86%), Query Frame = 1
Query:  124 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            +G A GIDLGTTYSCVGV+QH +VEIIAN+QGNRTTPSYV FTDTERLIG  AKNQV++NP NTVFDA+
Sbjct:    5 KGVAFGIDLGTTYSCVGVFQHGKVEIIANNQGNRTTPSYVAFTDTERLIGAPAKNQVSLNPQNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP72_PARLI (Heat shock 70 kDa protein II (Fragment) OS=Paracentrotus lividus GN=HSP70II PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.246e-64
Identity = 81/117 (69.23%), Postives = 96/117 (82.05%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGA-TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR FSD +V+ DMK WPF VI     +P I + +KGE K F AEEISSMVL+KM+E AEAYLG  ++ +AVVTVPAYFNDSQRQATK+ GVI+G+N++RIINEPTAAAIAYGL
Sbjct:   70 KRLIGRNFSDTNVKADMKHWPFTVIE-EGGRPKIKIEFKGESKTFYAEEISSMVLLKMKETAEAYLGKESVTDAVVTVPAYFNDSQRQATKECGVISGMNILRIINEPTAAAIAYGL 185          

HSP 2 Score: 110.538 bits (275), Expect = 1.246e-64
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 1
Query:  124 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNP 306
            + PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKN+ A NP
Sbjct:    3 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNKTASNP 63          
The following BLAST results are available for this feature:
BLAST of FC875341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP76_SAGOE8.047e-7072.41Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP71_CANAL3.035e-6975.86Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP70_CERCA6.731e-6969.83Heat shock protein 70 OS=Ceratitis capitata PE=2 S... [more]
HSP71_CERAE1.493e-6872.41Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP72_YEAST4.317e-6873.28Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP72_PICAN1.628e-6773.28Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP71_YEAST1.044e-6672.41Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP71_PICAN1.775e-6669.83Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP70_PLEWA6.693e-6667.24Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP72_PARLI1.246e-6469.23Heat shock 70 kDa protein II (Fragment) OS=Paracen... [more]

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Properties
Property NameValue
Genbank descriptionC31402H03EF CTVClemen1 Citrus clementina cDNA clone C31402H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875341 ID=FC875341; Name=FC875341; organism=Citrus clementina; type=EST; length=674bp
GAGAACCCATACAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTT
TTTCTTCGCTGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAG
TTTTGATAATGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTG
GGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGAT
TATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCA
CCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCCATG
AACCCCACGAACACCGTCTTTGATGCAAGAGGTTGATTGGTAGGAGATTC
AGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGAT
TGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAG
AGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATG
CGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGT
TACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATG
CCGGTGTCATTGCTGGGCTTAATGTGATGCGTATCATCAACGAGCCCACT
GCTGCTGCCATTGCTTATGGCCTT
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