FC875341

Overview
NameFC875341
Unique NameFC875341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.109e-64
Identity = 81/116 (69.83%), Postives = 90/116 (77.59%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F+D  VQ DMK +PFK I      P I V ++GE K F  E ISSM   K REIAE+YLG T+ NAVVTVPAYFNDSQRQ TKDAG+IAGLNV+RIINEPTAAAIAYGL
Sbjct:   68 KRLIGRKFADPEVQADMKHFPFK-ITDKGGNPKIQVEFRGEGKHFTPEGISSMFRRKKREIAESYLGGTVNNAVVTVPAYFNDSQRQVTKDAGLIAGLNVLRIINEPTAAAIAYGL 182          

HSP 2 Score: 113.235 bits (282), Expect = 2.109e-64
Identity = 54/67 (80.60%), Postives = 62/67 (92.54%), Query Frame = 1
Query:  130 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            PAIGIDLGTTYSCVG+++ DR+EIIAN+QGNR TPS+V FTDTERLIGDAAKNQVAMNP  TVF+A+
Sbjct:    3 PAIGIDLGTTYSCVGIFRDDRIEIIANEQGNRNTPSFVAFTDTERLIGDAAKNQVAMNP-QTVFEAK 68          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 7.949e-64
Identity = 81/116 (69.83%), Postives = 97/116 (83.62%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR ++D +VQ D+K WPFKVI   ++KP + V    + KQF  EE+S+MVL+KM+EIAE+YLG  +KNAVVTVPAYFND+QRQATKDAG IAGLNV+RIINEPTAAAIAYGL
Sbjct:  102 KRLIGRDYNDKTVQADIKHWPFKVI-DKSNKPSVEVKVGSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGL 216          

HSP 2 Score: 103.219 bits (256), Expect = 7.949e-64
Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT--DTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYV F+    +RLIGDAAKNQ+ +NP NT+FDA+
Sbjct:   33 GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFDAK 102          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP75_KLULA (Heat shock protein SSB OS=Kluyveromyces lactis GN=SSB PE=3 SV=3)

HSP 1 Score: 164.081 bits (414), Expect = 1.352e-63
Identity = 85/116 (73.28%), Postives = 95/116 (81.90%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF + SVQ DMK WPFKVI    D P+I V Y GE K F+ +EISSMVL KM+EIAEA +G  ++ AVVTVPAYFND+QRQATKDAG IAGLNV+RIINEPTAAAIAYGL
Sbjct:   73 KRLIGRRFDEESVQSDMKTWPFKVIDSN-DAPLIEVEYLGETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 187          

HSP 2 Score: 100.523 bits (249), Expect = 1.352e-63
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCV  +++  VEIIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDA+
Sbjct:    9 AIGIDLGTTYSCVATYENS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPKNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP75_SCHPO (Heat shock protein sks2 OS=Schizosaccharomyces pombe GN=sks2 PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 1.352e-63
Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRR+ D   Q D+K WPFKVI      P I VNY GE+KQF A+EIS+MVL KM+EI+EA L   ++ AV+TVPAYF+DSQR ATKDAG IAGLNV+RIINEPTAAAIAYGL
Sbjct:   73 KRLIGRRYEDPETQKDIKHWPFKVIDNNGI-PTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGL 187          

HSP 2 Score: 110.923 bits (276), Expect = 1.352e-63
Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCV VW+   VEII NDQG RTTPS+V FT+TERL+GDAAKNQ AMNP NTVFDA+
Sbjct:    8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP75_ASHGO (Heat shock protein SSB OS=Ashbya gossypii GN=SSB PE=3 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 2.998e-63
Identity = 84/116 (72.41%), Postives = 94/116 (81.03%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF D SVQ DMK WPFKVI      PMI V Y GE K F+ +EIS+MVL KM+EIAEA +G  ++ AV+TVPAYFND+QRQATKDAG IAGLNV+RIINEPTAAAIAYGL
Sbjct:   73 KRLIGRRFDDESVQSDMKTWPFKVIDANGS-PMIEVEYLGETKSFSPQEISAMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 187          

HSP 2 Score: 99.7525 bits (247), Expect = 2.998e-63
Identity = 49/66 (74.24%), Postives = 55/66 (83.33%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCV  ++   VEIIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDA+
Sbjct:    9 AIGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPRNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 5.094e-63
Identity = 79/116 (68.10%), Postives = 97/116 (83.62%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR ++D +VQ D+K WPFKV+   ++KP + V    + KQF  EE+S+MVL+KM+EIAE+YLG  +K+AVVTVPAYFND+QRQATKDAG IAGLNV+RIINEPTAAAIAYGL
Sbjct:  102 KRLIGRDYNDKTVQADIKHWPFKVL-DKSNKPSVEVKVGADNKQFTPEEVSAMVLVKMKEIAESYLGKEVKHAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGL 216          

HSP 2 Score: 103.219 bits (256), Expect = 5.094e-63
Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT--DTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYV F+    +RLIGDAAKNQ+ +NP NT+FDA+
Sbjct:   33 GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGEQGDRLIGDAAKNQLTINPENTIFDAK 102          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_ECHGR (78 kDa glucose-regulated protein OS=Echinococcus granulosus GN=GRP78 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.095e-63
Identity = 81/116 (69.83%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR + D  VQGD+K +PFKVI    +KP + V    EEK FA EE+S+MVL KM+EIAEAYLG  + +AVVTVPAYFND+QRQATKDAG IAGL V+RIINEPTAAAIAYGL
Sbjct:   96 KRLIGRDYHDKDVQGDIKRYPFKVI-NKNNKPYMKVQVGSEEKGFAPEEVSAMVLSKMKEIAEAYLGTEVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVLRIINEPTAAAIAYGL 210          

HSP 2 Score: 108.612 bits (270), Expect = 5.095e-63
Identity = 58/87 (66.67%), Postives = 67/87 (77.01%), Query Frame = 1
Query:   76 FILLFLA*VLIMAGKGE-GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAR 330
            F+L  L      +GK E G  IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYV F+ D ERLIGDAAKNQ+  NP NT+FDA+
Sbjct:   10 FLLCILTLSRCKSGKEEYGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDGERLIGDAAKNQLTSNPKNTLFDAK 96          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_ECHMU (78 kDa glucose-regulated protein OS=Echinococcus multilocularis GN=GRP78 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.095e-63
Identity = 81/116 (69.83%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR + D  VQGD+K +PFKVI    +KP + V    EEK FA EE+S+MVL KM+EIAEAYLG  + +AVVTVPAYFND+QRQATKDAG IAGL V+RIINEPTAAAIAYGL
Sbjct:   96 KRLIGRDYDDKDVQGDIKRYPFKVI-NKNNKPYMKVQVGSEEKGFAPEEVSAMVLSKMKEIAEAYLGTEVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVLRIINEPTAAAIAYGL 210          

HSP 2 Score: 108.227 bits (269), Expect = 5.095e-63
Identity = 58/87 (66.67%), Postives = 67/87 (77.01%), Query Frame = 1
Query:   76 FILLFLA*VLIMAGKGE-GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAR 330
            F+L  L      +GK E G  IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYV F+ D ERLIGDAAKNQ+  NP NT+FDA+
Sbjct:   10 FLLCILTLSHCKSGKEEYGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDGERLIGDAAKNQLTSNPKNTLFDAK 96          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP75_KLUDE (Heat shock protein SSB OS=Kluyveromyces delphensis GN=SSB PE=3 SV=3)

HSP 1 Score: 161.384 bits (407), Expect = 1.473e-62
Identity = 82/116 (70.69%), Postives = 95/116 (81.90%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF + SVQ DMK WPFKV+      P+I V Y GE KQF+ +EISSMVL KM+EIAEA +G  ++ AV+TVPAYFND+QRQATKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct:   73 KRLIGRRFDEESVQNDMKTWPFKVV-DVEGAPVIEVEYLGETKQFSPQEISSMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGL 187          

HSP 2 Score: 99.7525 bits (247), Expect = 1.473e-62
Identity = 49/66 (74.24%), Postives = 55/66 (83.33%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCV  ++   VEIIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDA+
Sbjct:    9 AIGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPKNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP75_CANGA (Heat shock protein SSB OS=Candida glabrata GN=SSB1 PE=3 SV=3)

HSP 1 Score: 161.384 bits (407), Expect = 1.473e-62
Identity = 82/116 (70.69%), Postives = 95/116 (81.90%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF + SVQ DMK WPFKV+      P+I V Y GE KQF+ +EISSMVL KM+EIAEA +G  ++ AV+TVPAYFND+QRQATKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct:   73 KRLIGRRFDEESVQNDMKTWPFKVVDVDG-APVIEVEYLGENKQFSPQEISSMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGL 187          

HSP 2 Score: 99.7525 bits (247), Expect = 1.473e-62
Identity = 49/66 (74.24%), Postives = 55/66 (83.33%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCV  ++   VEIIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDA+
Sbjct:    9 AIGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPKNTVFDAK 73          
The following BLAST results are available for this feature:
BLAST of FC875341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_PARBA2.109e-6469.83Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HSP7C_CAEEL7.949e-6469.83Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
HSP75_KLULA1.352e-6373.28Heat shock protein SSB OS=Kluyveromyces lactis GN=... [more]
HSP75_SCHPO1.352e-6368.97Heat shock protein sks2 OS=Schizosaccharomyces pom... [more]
HSP75_ASHGO2.998e-6372.41Heat shock protein SSB OS=Ashbya gossypii GN=SSB P... [more]
HSP7C_CAEBR5.094e-6368.10Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]
GRP78_ECHGR5.095e-6369.8378 kDa glucose-regulated protein OS=Echinococcus g... [more]
GRP78_ECHMU5.095e-6369.8378 kDa glucose-regulated protein OS=Echinococcus m... [more]
HSP75_KLUDE1.473e-6270.69Heat shock protein SSB OS=Kluyveromyces delphensis... [more]
HSP75_CANGA1.473e-6270.69Heat shock protein SSB OS=Candida glabrata GN=SSB1... [more]

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Properties
Property NameValue
Genbank descriptionC31402H03EF CTVClemen1 Citrus clementina cDNA clone C31402H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875341 ID=FC875341; Name=FC875341; organism=Citrus clementina; type=EST; length=674bp
GAGAACCCATACAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTT
TTTCTTCGCTGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAG
TTTTGATAATGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTG
GGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGAT
TATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCA
CCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCCATG
AACCCCACGAACACCGTCTTTGATGCAAGAGGTTGATTGGTAGGAGATTC
AGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGAT
TGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAG
AGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATG
CGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGT
TACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATG
CCGGTGTCATTGCTGGGCTTAATGTGATGCGTATCATCAACGAGCCCACT
GCTGCTGCCATTGCTTATGGCCTT
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