FC875343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH39_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.9 OS=Oryza sativa subsp. japonica GN=GH3.9 PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 6.200e-71 Identity = 138/219 (63.01%), Postives = 162/219 (73.97%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSSDPQPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNA-SRLLREFNTNVGEYTICANTKTIPGHYVIYWELLIKD-----SANSPNNEVLNQCCL 641 IWPNTKY+D IVTGAMAQYI TL YYSGG LP+ T YASSEC+FG+NL P+C PSEVSYTIMPN AYFEFLP G VDL VEVG+EY++VITTYAGL RYRVGD+LRVTGFHN+APQF FVRR++VLLS+E DKTDEA+L A++ A S LLR +V EYT A T+ IPGHYV+YWELL + ++ + E L +CCL Sbjct: 142 IWPNTKYVDAIVTGAMAQYIRTLQYYSGG-LPIVSTSYASSECFFGINLRPVCDPSEVSYTIMPNTAYFEFLP------VGEVVDATNLVDLARVEVGREYEVVITTYAGLSRYRVGDVLRVTGFHNAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASSALLRPRGVSVAEYTSRACTERIPGHYVVYWELLTESPVGAGDGDTVDGETLGRCCL 353
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH31_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Oryza sativa subsp. japonica GN=GH3.1 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 9.898e-69 Identity = 123/214 (57.48%), Postives = 161/214 (75.23%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSSDPQPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTNVGEYTICANTKTIPGHYVIYWELLIKDSANSPNNEVLNQCCLA 644 +WP TKY+DVIVTG M+QYIPTL++Y GG LP+ CTMYASSECYFGLNLNP+C+PS+V+YT++P M Y+EFLP ++ +S VDLVDV++G EY+LV+TTY+GLYRYRVGD+LRV GF N AP F FVRR+NV LS++SDKTDE +L A+ A + L F ++ EYT A+ TIPGHYV++WEL + + + V +CCL+ Sbjct: 302 LWPRTKYIDVIVTGTMSQYIPTLEFYGGG-LPLTCTMYASSECYFGLNLNPMCKPSDVAYTLIPTMCYYEFLPVN-CNNATAEASHRDLVDLVDVKLGHEYELVVTTYSGLYRYRVGDVLRVAGFKNKAPMFSFVRRQNVALSVDSDKTDETELHAAVSGAVQHLAPFGASLVEYTSYADAATIPGHYVLFWEL--RAGSTAVPASVFEECCLS 511
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH317_ARATH (Indole-3-acetic acid-amido synthetase GH3.17 OS=Arabidopsis thaliana GN=GH3.17 PE=1 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.024e-65 Identity = 126/229 (55.02%), Postives = 167/229 (72.93%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLP-----QEPAHSFGLTSSDPQP--------VDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNA--SRLLREFNTNVGEYTICANTKTIPGHYVIYWELLIKDSANSP--NNEVLNQCC 638 IWP KY++VIVTG+MAQYIPTL++YSGG LP+ TMYASSECYFG+NLNP+C P++VSYT++PNMAYFEFLP E H +++D V+LV+VEVG+ Y++VITT+ GLYRYRVGDIL+VTGFHN APQF FV+R+NV+LSI++DKT E L NA+ A + L + + EYT A+T +IPGHYV++WEL + S + P +++ + CC Sbjct: 293 IWPKAKYVEVIVTGSMAQYIPTLEFYSGG-LPLVSTMYASSECYFGINLNPLCDPADVSYTLLPNMAYFEFLPVDDKSHEEIHFATHSNTDDDDDALKEDLIVNLVNVEVGQYYEIVITTFTGLYRYRVGDILKVTGFHNKAPQFRFVQRRNVVLSIDTDKTSEEDLLNAVTQAKLNHLQHPSSLLLTEYTSYADTSSIPGHYVLFWELKPRHSNDPPKLDDKTMEDCC 520
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH311_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.11 OS=Oryza sativa subsp. japonica GN=GH3.11 PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 1.932e-64 Identity = 117/223 (52.47%), Postives = 161/223 (72.20%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSSDPQPV-------DLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTNVGEYTICANTKTIPGHYVIYWEL-LIKDSANSP-NNEVLNQCCLA 644 +WPN KY++ ++TG MAQYIP L++Y GG +P CTMYASSE YFG+NL+P+C P++VSYTI+PNMAYFEF+P E GL +D + V LVDV+VG Y+LV+TT++GLYRYRVGD+L+VTGF+N APQF F+ R+NV+LSI+SDKT+E L N++ A ++L N + EYT + T+PGHYV++WE+ D +P + ++L CC A Sbjct: 291 LWPNVKYIEAVLTGTMAQYIPMLEFYGGGAIPFVCTMYASSESYFGVNLSPLCSPADVSYTILPNMAYFEFIPLED----GLRLTDHEEVIENDKLVSLVDVKVGCYYELVVTTFSGLYRYRVGDVLQVTGFYNRAPQFKFICRRNVILSIDSDKTNEEDLHNSVTTAKKILENQNYLLLEYTSYTDISTVPGHYVLFWEIKSTHDERPAPLDAQLLESCCAA 509
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH310_ORYSJ (Putative indole-3-acetic acid-amido synthetase GH3.10 OS=Oryza sativa subsp. japonica GN=GH3.10 PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 5.816e-61 Identity = 120/189 (63.49%), Postives = 144/189 (76.19%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSSDPQPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNA-SRLLREFNTNVGEYTICANTKTIPGHY 566 +WP TK L+V+VTG MAQYIPTL YYSGG LP+ MYASSEC+FGLNL P+C PSEVSYTIMPN AYFEFLP G V+L VE G+EY++V+TTYAGL RYRVGD+L VTGFHN+APQF FVRR++VLLSIE+DKTDEA+LQ A++ A S LLR ++ EYT A T+ +PGH+ Sbjct: 286 LWPKTKCLNVVVTGVMAQYIPTLQYYSGG-LPIVSGMYASSECFFGLNLRPLCGPSEVSYTIMPNTAYFEFLP------VGEAVDASNLVELARVEDGREYEVVVTTYAGLNRYRVGDVLCVTGFHNAAPQFRFVRRQSVLLSIEADKTDEAELQRAVERASSALLRPRGASIVEYTSRACTERVPGHF 467
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH39_ARATH (Putative indole-3-acetic acid-amido synthetase GH3.9 OS=Arabidopsis thaliana GN=GH3.9 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.584e-58 Identity = 105/220 (47.73%), Postives = 157/220 (71.36%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLP--QEPAHSFGLTSSDPQP----VDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTNVGEYTICANTKTIPGHYVIYWELLIKDSANSPNNEVLNQCCLA 644 +WP K+++ +VTG+MAQYIP L+++S GK+P+ C MYASSE YFG+N+ P+ +PS+V +T++PNM YFEF+P + SF L + P VDLV+V++G+ Y+LV+TT+AGLYRYR+GD+L+V GF+N APQF F+ R+NV+LSI+ DKT+E L +I A + L N + EYT A+T ++PGHYV++WE+ +++ +CC+A Sbjct: 289 LWPKAKFIEAVVTGSMAQYIPALEFFSQGKIPLVCPMYASSETYFGVNVEPLSKPSDVVFTLLPNMCYFEFIPLGKNGTLSFDLDDDEQVPCDKVVDLVNVKLGRYYELVVTTFAGLYRYRIGDVLQVAGFYNGAPQFRFICRRNVVLSIDLDKTNEEDLHRSITLAKKKLGS-NAFLAEYTSYADTSSVPGHYVLFWEI-----QGHLEPKLMEECCVA 502
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH37_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.7 OS=Oryza sativa subsp. japonica GN=GH3.7 PE=2 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 5.647e-48 Identity = 101/226 (44.69%), Postives = 142/226 (62.83%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLP---QEPAHSFGLTSSDP-----QPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRL-LREFNTNVGEYTICANTKTIPGHYVIYWELLIKDSAN---SPNNEVLNQCCLA 644 +WP +Y+ IVTG+M+QYIP L+ Y GG LP+ +YAS+EC G+NL P+ PS VSY ++PN+AYFEFL + G T D + VDLVDV+VG+ Y+L++TT+AGLYRYRVGD+ V+GF+N+ P FHF R +V+LSI+ +K E L NAI + LR + T A+ T+PGHY+++WEL +N + + +CCLA Sbjct: 309 LWPRARYIRTIVTGSMSQYIPILEVYGGG-LPLVSPIYASTECAAGINLRPLDPPSHVSYALLPNIAYFEFLEVMDENGEKVQGTTRLDDNLGEVKVVDLVDVKVGRCYELIVTTFAGLYRYRVGDLFTVSGFYNATPLFHFSGRHDVILSIDYEKISEEDLLNAIAETDKFHLRPLGYMLVGSTAYADISTLPGHYILFWELTNTCDSNVAIDIDQTAMEKCCLA 533
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH312_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.12 OS=Oryza sativa subsp. japonica GN=GH3.12 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 8.438e-44 Identity = 89/232 (38.36%), Postives = 136/232 (58.62%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEP---------------AHSFGLTSSDPQPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTN-----VGEYTICANTKTIPGHYVIYWELLIKDSANSPNNEVLNQCC 638 +WPN +Y+ +TG+M Y+ L +Y+GG +P+ YASSE G+N P V +T++P+ AYFEF+P +P S + + D PV L DV VG+ Y++V+TT+ GLYRYR+GD+++V GFH++ P+ FV R++++LSI DK E LQ A+D+A+++L N + +YT A+T + PGHYV++WEL VL +CC Sbjct: 300 LWPNARYVQATMTGSMEHYVKKLRHYAGG-VPLVSGNYASSEGVIGINAEQHAPPESVVFTVLPDAAYFEFIPLKPPCTDAAADDDNPAAAGSSCYVDADDANPVGLTDVVVGEHYEVVMTTFTGLYRYRLGDVVKVAGFHHATPKLRFVCRRSLILSINVDKNSEHDLQLAVDSAAKILAGDGENHKQLEIADYTSHADTSSDPGHYVVFWEL--NGGGEEDGGGVLQRCC 528
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH35_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.5 OS=Oryza sativa subsp. japonica GN=GH3.5 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.188e-43 Identity = 87/220 (39.55%), Postives = 135/220 (61.36%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLP------QEPAHSFGLTSSDPQPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIESDKTDEAKLQNAIDNASRLLREFNTNVGEYTICANTKTIPGHYVIYWELLIKDSANSPNNEVLNQCCLA 644 +WPN KY+ I+TG+M Y+ L +Y+G LP+ Y +SE + G N++P P +V+Y ++P + YFEF+P +E +S + + PV L +VEVGK Y++VIT +AGLYRYR+GD++++ FHNS P+ F+ R++++LSI DK E LQ A++ AS+ L V ++T + PG YVI+WEL + ++EVL+ C A Sbjct: 287 LWPNAKYVYGIMTGSMEPYLKKLRHYAGN-LPLISADYGASEGWVGSNIDPTVPPEQVTYAVLPQVGYFEFIPLEKPIGEETENSASIHYIESDPVGLTEVEVGKIYEVVITNFAGLYRYRLGDVVKIARFHNSTPELQFICRRSLVLSINIDKNTEKDLQLAVEEASKFLEGEKLEVMDFTSFVERSSDPGRYVIFWEL-----SGDASDEVLSSCANA 500
BLAST of FC875343 vs. ExPASy Swiss-Prot
Match: GH36_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.6 OS=Oryza sativa subsp. japonica GN=GH3.6 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 4.344e-32 Identity = 59/137 (43.07%), Postives = 91/137 (66.42%), Query Frame = 3 Query: 3 IWPNTKYLDVIVTGAMAQYIPTLDYYSGGKLPMACTMYASSECYFGLNLNPICRPSEVSYTIMPNMAYFEFLPQEPAHSFGLTSSDPQPVDLVDVEVGKEYQLVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRR 413 +WP+ +Y+ + TG M QY P + +++G LP+ T Y +SEC G+NL P E +Y ++P AYFEF+P + + G ++ +PVD+ VE GK Y+LV TT+ GLYRY+VGD++++ GFH+S+P+ FV R Sbjct: 133 LWPDARYISCVTTGTMEQYFPAIKHFAGEALPVLGTDYLASECAIGINLERTSPPEETTYVLLPRAAYFEFIPFD-MDAAGRGAAAAEPVDIAGVEAGKTYELVATTFRGLYRYKVGDVVKIAGFHHSSPRLQFVTR 268 The following BLAST results are available for this feature:
BLAST of FC875343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875343 ID=FC875343; Name=FC875343; organism=Citrus clementina; type=EST; length=644bpback to top |