FC875348
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_PYRAB (30S ribosomal protein S7P OS=Pyrococcus abyssi GN=rps7p PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.992e-30 Identity = 78/194 (40.21%), Postives = 108/194 (55.67%), Query Frame = 1 Query: 139 PHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRN----------------NGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYA 672 PH ++K+ RW+ EDV+V D SL YI ++ +PHT GR++ K F KA IVERL N +M G + N KK+ A +VK A +II T +NPIQV+V A+ N+ PRED T + G+ AVDISP+RR++ A+ + GA +R + AE LA+E+I AA SYA Sbjct: 12 PH-EIKVMGRWSTEDVEVRDPSLKPYINLEPR----LLPHTHGRHAKKHFGKANVHIVERLINKIMRSGGSHYKVAGHFMRREHRSLNSKKVKAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPMRRLDVALRNIALGASAKCYRTKMSFAEALAEEIILAANKDPKSYA 200
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_NATPD (30S ribosomal protein S7P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps7p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.704e-29 Identity = 68/174 (39.08%), Postives = 102/174 (58.62%), Query Frame = 1 Query: 154 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAI 675 +LF W +++ +D S YI V T + HT GR+S K+F+K++ IVERL N LM N GKK A +IV+ A +I+ TD+NP+QV+V AV N+GPRE+ R+ G+ +AVD++P RRV+ A+ + G +F+ + E LA +LI AA +Y + Sbjct: 22 QLFGEWEIGEIEYDDPSTRRYITV------TPIAHTMGRHSEKQFKKSEISIVERLINRLMQTDENTGKKQQATKIVREAFDIVAERTDENPVQVLVTAVENAGPREETVRLKYGGISVPKAVDVAPQRRVDLALKFIAEGTYNDSFKTTTPVEEALAHQLIGAANYDLQAYPV 189
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_METLZ (30S ribosomal protein S7P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps7p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.226e-29 Identity = 67/175 (38.29%), Postives = 105/175 (60.00%), Query Frame = 1 Query: 151 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAI 675 + LFN+W +V V D + Y+ + + T VP + GR + ++F K++ IVERL N LM N GKK+M ++V A ++I+ T QNP+QV+VDAV N+GPRE+ R+ G+ ++VD +P+RRVN A+ + + + + K LADELI AAKG + +++ Sbjct: 10 ILLFNKWDMSEVVVKDAGMVRYVTITS----TEVPSSCGRLTQQQFTKSEMAIVERLINRLMQQEYNTGKKMMCTKMVMDAFDVINKKTKQNPLQVLVDAVANAGPREETVRLKYGGINVPKSVDSAPIRRVNTALRYIALATWKGSHKTKKPAYLVLADELIMAAKGDAKCFSV 180
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_NANEQ (30S ribosomal protein S7P OS=Nanoarchaeum equitans GN=rps7p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.458e-29 Identity = 77/187 (41.18%), Postives = 102/187 (54.55%), Query Frame = 1 Query: 151 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGR-----------NNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 678 +KLF RW +EDV V D L DYI ++ +P++ GR+ RF KA+ PI+ERL LM G GKK A +I+ EII T QNP++V V A+ N+ PRE+ T I G +AVD SP RRV+ AI + GA + + +I E LA+E+INA S SYAIK Sbjct: 3 MKLFGRWDYEDVTVEDPGLRDYINLKPM----LIPYSGGRHQKHRFGKAKIPIIERLAGRLMTSGHLGKKHKWTSEHQTGKKYNAYKIIIRTFEIIEKRTKQNPLKVFVKAIENAAPREETTTIEYGGARYPKAVDCSPQRRVDLAIRHMVWGAFHGSRKKPISIEEALAEEIINAYNNSLKSYAIK 185
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_PICTO (30S ribosomal protein S7P OS=Picrophilus torridus GN=rps7p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.884e-28 Identity = 65/176 (36.93%), Postives = 106/176 (60.23%), Query Frame = 1 Query: 148 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAI 675 D + ++ +Q++D+ L+ YI + ++ + HT GRYS K +ERL N LM + GKK A R++K A EI+ T QNP+QV+++A+ NS PRE+ TR+ G+ ++VD+SP RR+++A+ + GA +F++ I ECLA+E+I A++ NSYA+ Sbjct: 2 DRLIMGKYDVSGIQIHDMGLAKYINL----NSYFNLHTGGRYSNYSAGKRNVNTIERLLNKLMRTEKWTGKKYSAYRVLKEAFEIVEQKTKQNPVQVLINAIENSAPREEVTRLKYGGIAVPKSVDVSPSRRLDEALRNICIGATSKSFKSKVPIEECLANEIILASRNDGNSYAV 173
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_HALWD (30S ribosomal protein S7P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps7p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.884e-28 Identity = 65/176 (36.93%), Postives = 102/176 (57.95%), Query Frame = 1 Query: 148 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAI 675 + KLF W +++ D S YI V T + HT GR++ K+F K++ +VERL N LM N G K + IV+ A + IH T++NP+QV+V V N+ PRE+ R+ G+ QAVD++P RRV+QA+ + G + ++++ ++ A+ LA +I AA SYA+ Sbjct: 44 NAKLFGEWDVSEIEYEDPSTQRYITV------TPIAHTMGRHAAKQFEKSKISVVERLINRLMQTEDNTGHKQKTMNIVEDAFDTIHNRTEENPVQVLVRGVENAAPREETVRLKYGGISVPQAVDVAPQRRVDQALKFIADGTQRGSYKSAQSAADSLAQVIIGAANYDVQSYAV 213 The following BLAST results are available for this feature:
BLAST of FC875348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875348 ID=FC875348; Name=FC875348; organism=Citrus clementina; type=EST; length=679bpback to top |