FC875354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875354 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23 Identity = 64/138 (46.38%), Postives = 80/138 (57.97%), Query Frame = 2 Query: 116 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLSPNKAYTIRLPPLWS-GRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSG-KCSYAGC 523 F+ A T + N C VWP AG P+ GGF+L+ ++ I +P S GR WGR GC F+ +GRG CATGDC G+L C G PATLAE T+G QDFYD+S++DGYN+AM G KC A C Sbjct: 15 FAAGASAATFRITNNCGFTVWP-----AGIPV--GGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG--QPATLAEYTIGGSQDFYDISVIDGYNLAMDFSCSTGVALKCRDANC 142
BLAST of FC875354 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.364e-23 Identity = 63/138 (45.65%), Postives = 80/138 (57.97%), Query Frame = 2 Query: 116 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLSPNKAYTIRLPPLWS-GRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSG-KCSYAGC 523 F+ A T + N C VWP AG P+ GGF+L+ ++ I +P S GR WGR GC F+ +GRG CATGDC G+L C G PATLAE T+G QDFYD+S++DG+N+AM G KC A C Sbjct: 15 FAAGASAATFRITNNCGFTVWP-----AGIPV--GGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG--QPATLAEYTIGGSQDFYDISVIDGFNLAMDFSCSTGVALKCRDANC 142
BLAST of FC875354 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.674e-21 Identity = 59/148 (39.86%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 116 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLSPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCP 550 F+ A T + N C +WP AG P+ GGF+L + +I +P +GR W R GC F+ G G C TGDCGG L C+ + G PPATLAE T+G QDFYD+S++DG+N+AM CS + + CP Sbjct: 14 FAAGASAATFNIKNNCGSTIWP-----AGIPV--GGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCS-LSGQPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDF-------SCSTGDALQCRDPSCP 145
BLAST of FC875354 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.492e-21 Identity = 59/148 (39.86%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 116 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLSPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCP 550 F+ A T + N C +WP AG P+ GGF+L + +I +P +GR W R GC F+ G G C TGDCGG L C+ + G PPATLAE T+G QDFYD+S++DG+N+AM CS + + CP Sbjct: 14 FAAGASAATFNIKNNCGSTIWP-----AGIPV--GGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCS-LSGRPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDF-------SCSTGDALQCRDPSCP 145
BLAST of FC875354 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.780e-21 Identity = 59/148 (39.86%), Postives = 78/148 (52.70%), Query Frame = 2 Query: 116 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLSPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCP 550 F+ A T + N C +WP AG P+ GGF L + +I +P +GR W R GC F+ G G C TGDCGG L C+ + G PPATLAE T+G QDFYD+S++DG+N+AM CS + + CP Sbjct: 14 FAAGASAATFNIKNNCGFTIWP-----AGIPV--GGGFALGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCS-LSGRPPATLAEYTIGGGSTQDFYDISVIDGFNLAMDF-------SCSTGDALQCRDPSCP 145
BLAST of FC875354 vs. ExPASy Swiss-Prot
Match: RST4_AVESA (Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.602e-20 Identity = 55/162 (33.95%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 116 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLSPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKS 598 F+ + A T T+ N C + VWP + GG +L + +T+ +P SGR WGR GC F+ G G C TGDC G+L C G PATLAE ++G + D+YD+S++D YN+AM CS + + CP + + +C + Sbjct: 15 FAASASAATFTITNNCGYTVWPAA-------IPVGGGQQLDQGQTWTLNVPAGTNSGRIWGRTGCSFNG-GSGSCQTGDCAGALSCTLSG--QPATLAEFSIGGEHDYYDISVIDVYNLAMDF-------SCSTGDALQCRDSSCPDAYHQPDDPKTHSCNT 159
BLAST of FC875354 vs. ExPASy Swiss-Prot
Match: PRR3_JUNVI (Pathogenesis-related protein (Fragment) OS=Juniperus virginiana PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 9.212e-14 Identity = 44/99 (44.44%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 134 ATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLSPNKAYTIRLPP-LWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQ 427 A + N+C + VW +AG P GG +L + +T+ L S RFWGR GC FDASG+G C TGDCG L C + G+ PATLAE T Q Sbjct: 19 AVKFDIKNQCGYTVW-----AAGLP---GGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGRQLSCT-VSGAVPATLAEYTQSDQ 108 The following BLAST results are available for this feature:
BLAST of FC875354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875354 ID=FC875354; Name=FC875354; organism=Citrus clementina; type=EST; length=751bpback to top |