FC875358
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875358 vs. ExPASy Swiss-Prot
Match: PSB3_BOVIN (Proteasome subunit beta type-3 OS=Bos taurus GN=PSMB3 PE=1 SV=3) HSP 1 Score: 223.016 bits (567), Expect = 1.123e-57 Identity = 107/185 (57.84%), Postives = 144/185 (77.84%), Query Frame = 3 Query: 120 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIV 671 YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFIC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +SG G V+I+ Sbjct: 6 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHII 190
BLAST of FC875358 vs. ExPASy Swiss-Prot
Match: PSB3_DROME (Proteasome subunit beta type-3 OS=Drosophila melanogaster GN=Prosbeta3 PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.621e-56 Identity = 100/185 (54.05%), Postives = 138/185 (74.59%), Query Frame = 3 Query: 120 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIV 671 YNG +VAM GK+C AIA+D R G+Q QTI+TDF+++ I R+F+GL+GL TD T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL + +PFIC MD IG DFVVAGT E LYG CE ++KPD+EPD+LFE ++Q+++++ DRD +SGWG VYI+ Sbjct: 6 YNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYII 190
BLAST of FC875358 vs. ExPASy Swiss-Prot
Match: PSB3_CAEEL (Proteasome subunit beta type-3 OS=Caenorhabditis elegans GN=pbs-3 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.267e-50 Identity = 86/185 (46.49%), Postives = 131/185 (70.81%), Query Frame = 3 Query: 120 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 674 Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D++T+ ++++FR LY+LRE R++KP+ + ++S L Y+ RFG YF +P++AGL D +KP+IC MD+IG +DFV GT E L G CE ++ +M+PDELFE +Q++LS ++RD SGWG VY +T Sbjct: 6 YTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAASGWGAVVYTIT 190
BLAST of FC875358 vs. ExPASy Swiss-Prot
Match: PSB3_YEAST (Proteasome component PUP3 OS=Saccharomyces cerevisiae GN=PUP3 PE=1 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.867e-50 Identity = 95/184 (51.63%), Postives = 136/184 (73.91%), Query Frame = 3 Query: 123 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIV 671 NG +VAM GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL + ++ LY+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG++ + KPFI D IG + AKDF+V+GTA + L+G CE++++P++EP++LFET+SQALL++ DRD LSGWG VYI+ Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVYII 190
BLAST of FC875358 vs. ExPASy Swiss-Prot
Match: PSB3_TRYBB (Proteasome subunit beta type-3 OS=Trypanosoma brucei brucei GN=PSB3 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.227e-47 Identity = 91/186 (48.92%), Postives = 133/186 (71.51%), Query Frame = 3 Query: 120 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 674 Y+G + +AM GK CF + SD RLG QL+TI+ + ++ I+D + +GL+GL TD QT Q++ FR ++Y+LREERD+ + FA+LVS++LYE RFGP+F +PVI + + + ++C D IGA +D+V AGT ESL+G CEA+++P +EP+ELFE +QA+LS+ DRD LSG+G IVT Sbjct: 6 YSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQQTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVYLCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSLSGYGAVAAIVT 191
BLAST of FC875358 vs. ExPASy Swiss-Prot
Match: PSB3_GIALA (Proteasome subunit beta type-3 OS=Giardia lamblia GN=PRSBETA3 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.473e-41 Identity = 78/186 (41.94%), Postives = 120/186 (64.52%), Query Frame = 3 Query: 117 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIV 671 EYNGSAL+ + G +C A+A+D+RLG QT+ + +RI ++ +GL+GL TD T Y+++ + LY L+E+R+++P A ++S+ LY+ RFGPYF P+IAG + KP++ MD+IG + +F +AGTA + L G CE KPDM DE+ + Q + S+ +RD SGWG HV ++ Sbjct: 6 EYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYSGWGAHVVVL 191
BLAST of FC875358 vs. ExPASy Swiss-Prot
Match: PSMB_ARCFU (Proteasome subunit beta OS=Archaeoglobus fulgidus GN=psmB PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.304e-17 Identity = 58/185 (31.35%), Postives = 93/185 (50.27%), Query Frame = 3 Query: 120 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 674 Y G+ V +V K+ +A+++R + + ++I +I DR+ + +G D+Q L + + LY++R ER A+L S LL R+ PY Q +I G+ E K I ++D IG KD V G+ + YG E F P++ DE E +A+ S++ RD SG G V +T Sbjct: 9 YKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS-IYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKIT 192
BLAST of FC875358 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.653e-16 Identity = 48/183 (26.23%), Postives = 93/183 (50.82%), Query Frame = 3 Query: 126 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 674 G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q + + L+ KLY++R R++ P A+L+S +L+ R P+ Q +I G + + ++D +G K F G+ YG EA + DM +E + AL S+++RD SG G + ++T Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVIT 188
BLAST of FC875358 vs. ExPASy Swiss-Prot
Match: PSB1_ARATH (Proteasome subunit beta type-1 OS=Arabidopsis thaliana GN=PBF1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15 Identity = 43/124 (34.68%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 123 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKE 494 NG VA+ G + IA+D R+ ++ D+ +I K+ DR + SG D + L + L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++G+ E Sbjct: 14 NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAVGSYE 137
BLAST of FC875358 vs. ExPASy Swiss-Prot
Match: PSB1_ORYSJ (Proteasome subunit beta type-1 OS=Oryza sativa subsp. japonica GN=PBF1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.175e-14 Identity = 53/171 (30.99%), Postives = 80/171 (46.78%), Query Frame = 3 Query: 117 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVD 629 E NG VA+ G + +A+D RL V + D +I ++ D+ + SG D + L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T D++G+ E G S G A+ P + D ++ S LL + D Sbjct: 10 ENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYE---------RTGYSAQGTGSALIMPVL--DNQLKSPSPLLLPARD 169 The following BLAST results are available for this feature:
BLAST of FC875358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875358 ID=FC875358; Name=FC875358; organism=Citrus clementina; type=EST; length=679bpback to top |