FC875368

Overview
NameFC875368
Unique NameFC875368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15136 contig Ccv1_Contig15136:5..693. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875368 vs. ExPASy Swiss-Prot
Match: ANXA2_MOUSE (Annexin A2 OS=Mus musculus GN=Anxa2 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.890e-14
Identity = 53/187 (28.34%), Postives = 91/187 (48.66%), Query Frame = 2
Query:   92 QGDHETMSTL---TVPAQVPSVTEDCEQLRKAFEGWGTNEQLIISILAHRNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSGNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYE-GDEVNITLAKSEAKILHE 640
            +GDH T  +      P        D   +  A +  G +E  I++IL +R+  QR+ I   Y     ++L  +L   L+   E V++     PA+ DA     + K   +    L+EI C+R++++L E  + Y   +K  LE+D+   T+GDFRKL++ L    R E G  ++  L   +A+ L++
Sbjct:   14 EGDHSTPPSAYGSVKPYTNFDAERDALNIETAVKTKGVDEVTIVNILTNRSNVQRQDIAFAYQRRTKKELPSALKSALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDARELYD 200          
BLAST of FC875368 vs. ExPASy Swiss-Prot
Match: ANX2A_XENLA (Annexin A2-A OS=Xenopus laevis GN=anxa2-A PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.890e-14
Identity = 51/164 (31.10%), Postives = 85/164 (51.83%), Query Frame = 2
Query:  152 EDCEQLRKAFEGWGTNEQLIISILAHRNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSGNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRY-EGDEVNITLAKSEAKILHE 640
            +D   +  A +  G +E  II+IL +R+  QR+ I   Y     +DL  +L   L+ + E V++       + DA     + K   +    L+EI C+R++K+LL+ + AY   +K  LE+D+   T+GDFRKL++ L    R  EG  V+      +A+ L+E
Sbjct:   38 KDAAAIETAIKTKGVDELTIINILTNRSNDQRQDIAFAYHRRTKKDLASALKGALSGNLETVMLGLIKTRPQYDASELKASMKGLGTDEDTLIEIICSRTNKELLDIQNAYRELYKTELEKDIVSDTSGDFRKLMVALAKGKRQEEGSVVDYEKIDQDARELYE 201          
BLAST of FC875368 vs. ExPASy Swiss-Prot
Match: ANXA2_RAT (Annexin A2 OS=Rattus norvegicus GN=Anxa2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 53/187 (28.34%), Postives = 92/187 (49.20%), Query Frame = 2
Query:   92 QGDHETMSTL---TVPAQVPSVTEDCEQLRKAFEGWGTNEQLIISILAHRNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSGNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYE-GDEVNITLAKSEAKILHE 640
            +GDH T  +      P        D   +  A +  G +E  I++IL +R+ AQR+ I   Y     ++L  ++   L+   E V++     PA+ DA     + K   +    L+EI C+R++++L E  + Y   +K  LE+D+   T+G+FRKLL+ L    R E G  ++  L   +A+ L++
Sbjct:   14 EGDHSTPPSAYGSVKPYTNFDAERDALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELPSAMKSALSGHLETVMLGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGEFRKLLVALAKGKRAEDGSVIDYELIDQDARELYD 200          
BLAST of FC875368 vs. ExPASy Swiss-Prot
Match: ANXA2_CHICK (Annexin A2 OS=Gallus gallus GN=ANXA2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 54/187 (28.88%), Postives = 90/187 (48.13%), Query Frame = 2
Query:   92 QGDHETMSTLTVPAQVPS---VTEDCEQLRKAFEGWGTNEQLIISILAHRNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSGNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEV-NITLAKSEAKILHE 640
            +GDH    +     +  S      D   L  A +  G +E  II+IL +R+  QR+ I   Y     ++L  +L   L+   E V++     P++ DA     A K   +    L+EI C+R++++L E  + Y   +K  LE+D+   T+GDFRKL++ L    R E   V +  L   +A+ L++
Sbjct:   14 EGDHSLPPSAYATVKAYSNFDADRDAAALEAAIKTKGVDEVTIINILTNRSNEQRQDIAFAYQRRTKKELSAALKSALSGHLEAVILGLLKTPSQYDASELKAAMKGLGTDEDTLIEIICSRTNQELNEINRVYREMYKTELEKDIISDTSGDFRKLMVALAKGKRCEDTSVIDYELIDQDARELYD 200          
BLAST of FC875368 vs. ExPASy Swiss-Prot
Match: ANX2B_XENLA (Annexin A2-B OS=Xenopus laevis GN=anxa2-B PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 51/164 (31.10%), Postives = 86/164 (52.44%), Query Frame = 2
Query:  152 EDCEQLRKAFEGWGTNEQLIISILAHRNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSGNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYE-GDEVNITLAKSEAKILHE 640
            +D   +  A +  G +E  II+IL +R+  QR+ I   +     +DL  +L   L+ + E V++       + DA     + K   +    L+EI C+R++K+LL+ + AY   FK  LE+D+   T+GDFRKL++ L    R E G+ V+      +A+ L+E
Sbjct:   38 KDAAAIETAIKTKGVDELTIINILTNRSNEQRQDIAFAFHRRTKKDLPSALKGALSGNLETVMLGLIKTRPQYDASELKASMKGLGTDEDTLIEIICSRTNKELLDIQNAYRELFKTELEKDIMSDTSGDFRKLMVALAKGRRQEDGNMVDYEKIDQDARELYE 201          
The following BLAST results are available for this feature:
BLAST of FC875368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ANXA2_MOUSE7.890e-1428.34Annexin A2 OS=Mus musculus GN=Anxa2 PE=1 SV=2[more]
ANX2A_XENLA7.890e-1431.10Annexin A2-A OS=Xenopus laevis GN=anxa2-A PE=2 SV=... [more]
ANXA2_RAT1.030e-1328.34Annexin A2 OS=Rattus norvegicus GN=Anxa2 PE=1 SV=2[more]
ANXA2_CHICK1.030e-1328.88Annexin A2 OS=Gallus gallus GN=ANXA2 PE=1 SV=2[more]
ANX2B_XENLA1.030e-1331.10Annexin A2-B OS=Xenopus laevis GN=anxa2-B PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC31403B09EF CTVClemen1 Citrus clementina cDNA clone C31403B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875368 ID=FC875368; Name=FC875368; organism=Citrus clementina; type=EST; length=689bp
GACAGCTGTCTGTCCTTCTTGTGTAGAGAGTCTCGTTCTCGATTCTGCGC
AGCACACAGAATCAGATTTGAGTTAAGTTCTGAAAGAAGAACAAGGAGAT
CACGAAACAATGTCAACACTTACAGTTCCAGCGCAAGTTCCATCTGTTAC
CGAAGACTGTGAGCAGCTCAGAAAAGCCTTTGAAGGATGGGGAACAAACG
AGCAACTGATCATATCGATACTGGCTCACAGAAATGCTGCTCAACGCAAG
TTGATTCGACAAACATATGCTGATACTTACGGCGAAGACCTCCTCAAGTC
GCTCGATAAGGAACTCACTAATGACTTTGAGAGGGTGGTGATGCTCTGGA
CTCTTGATCCTGCTGAACGTGATGCCTTTTTGGCTAATGAAGCCACTAAG
AGGTGGACTTCTGGCAACCAGGTTCTTATGGAAATTGCATGCACCAGGTC
TTCGAAGCAATTGCTCGAAGCAAGGCAGGCTTATCATGCTCGTTTTAAGA
AGTCCCTTGAAGAGGATGTTGGTTATCACACCAATGGGGACTTCCGCAAG
CTTTTGCTACCCCTTGTGACTGCCTACCGATATGAGGGTGATGAGGTGAA
CATTACACTTGCAAAATCAGAAGCTAAGATTCTCCATGAGAAGATTTCGA
ATAAGACTTACAATGATGAGGATCTCATCAGGATCTTGG
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