FC875373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA2_SCHPO (Importin subunit alpha-2 OS=Schizosaccharomyces pombe GN=imp1 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.020e-30 Identity = 73/150 (48.67%), Postives = 97/150 (64.67%), Query Frame = 3 Query: 3 PLVNLLQNAEFDIKKEAAWAISNATSGGTHE--QIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEED----------DETIAAGDGPQ 416 PLV+LL A++ KKEA WAISNATSGG + QI+YLV +G IKPLCD+ D +I+ V L+ +ENILKVGE ++ M ++NQYA VEEA G++ I +LQS NN+IY KA I+E Y+ +ED + G+GPQ Sbjct: 378 PLVHLLSYADYKTKKEACWAISNATSGGLGQPDQIRYLVSQGVIKPLCDMLNGSDNKIIQVALDAIENILKVGEMDRTMD--LENINQYAVYVEEAGGMDMIHDLQSSGNNDIYLKAYSIIEKYFSDEDAVEDLAPETENGAFTFGNGPQ 525
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA1_SCHPO (Importin subunit alpha-1 OS=Schizosaccharomyces pombe GN=cut15 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.118e-29 Identity = 65/130 (50.00%), Postives = 91/130 (70.00%), Query Frame = 3 Query: 3 PLVNLLQNAEFDIKKEAAWAISNATSGGTH--EQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEDD 386 PL++LL A+F I+KEA WAISNATSGG +QI+YLV +G IKPLC+L C D +I+ V L+G+ENIL+VGE ++ +N YA VE+A G++ I Q+ N+EIY+KA I+E ++ EED+ Sbjct: 378 PLIHLLTTADFKIQKEACWAISNATSGGARRPDQIRYLVEQGAIKPLCNLLACQDNKIIQVALDGIENILRVGELDR--ANNPDKINLYAVYVEDAGGMDLIHECQNSSNSEIYQKAYNIIEKFFGEEDE 505
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA4_MOUSE (Importin subunit alpha-4 OS=Mus musculus GN=Kpna4 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.950e-22 Identity = 51/126 (40.48%), Postives = 78/126 (61.90%), Query Frame = 3 Query: 6 LVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEED 383 +++LL +F +KEAAWAISN T G +Q+ YL+++ I P C+L D ++V V L+GL NILK+ E + A L+EE GLEKIE LQ+H+N +IY+ A +I++ ++ +D Sbjct: 373 IIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDQ---------AETIANLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDD 489
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA4_HUMAN (Importin subunit alpha-4 OS=Homo sapiens GN=KPNA4 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.852e-22 Identity = 51/126 (40.48%), Postives = 77/126 (61.11%), Query Frame = 3 Query: 6 LVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEED 383 +++LL +F +KEAAWAISN T G +Q+ YL+++ I P C+L D ++V V L+GL NILK+ E E L+EE GLEKIE LQ+H+N +IY+ A +I++ ++ +D Sbjct: 373 IIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDE---------AETIGNLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDD 489
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA3_CAEEL (Importin subunit alpha-3 OS=Caenorhabditis elegans GN=ima-3 PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.121e-21 Identity = 53/130 (40.77%), Postives = 81/130 (62.31%), Query Frame = 3 Query: 6 LVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKV-GEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEDDET 392 +++LL +F +KEAAWAISN T G Q++ +V+ G ++P C + C D +I+ V L+G+ NILK+ GEA Q +EE GL+KIENLQ+H+N +IY+ A +I++ ++ DDET Sbjct: 366 IIHLLDRGDFPTQKEAAWAISNVTISGRPNQVEQMVKLGVLRPFCAMLSCTDSQIIQVVLDGINNILKMAGEA----------AEQVTSEIEECGGLDKIENLQNHENEDIYKLAFEIIDNFF-SSDDET 484
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA2_MOUSE (Importin subunit alpha-2 OS=Mus musculus GN=Kpna2 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.912e-21 Identity = 58/147 (39.46%), Postives = 87/147 (59.18%), Query Frame = 3 Query: 6 LVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENIL----KVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYW-LEEDDETIAAGDGPQPGFPY 431 LV +L A+F +KEAAWAI+N TSGGT EQI YLV G I+PL +L D +I+ V L+ + NI K+GE EK + ++EE GL+KIE LQ H+N +Y+ ++ ++E Y+ +EE+++ + GF + Sbjct: 382 LVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEK-----------LSIMIEECGGLDKIEALQRHENESVYKASLNLIEKYFSVEEEEDQNVVPETTSEGFAF 517
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA2_HUMAN (Importin subunit alpha-2 OS=Homo sapiens GN=KPNA2 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.497e-21 Identity = 54/132 (40.91%), Postives = 82/132 (62.12%), Query Frame = 3 Query: 6 LVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENIL----KVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEDDE 389 LV++L A+F +KEA WA++N TSGGT EQI YLV G I+PL +L D +I+ V L+ + NI K+GE EK + ++EE GL+KIE LQ+H+N +Y+ ++ ++E Y+ E++E Sbjct: 382 LVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEK-----------LSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFSVEEEE 502
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA1_XENLA (Importin subunit alpha-1 OS=Xenopus laevis GN=kpna1 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.259e-21 Identity = 57/136 (41.91%), Postives = 81/136 (59.56%), Query Frame = 3 Query: 3 PLVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENIL----KVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEDDETIA 398 PLV+LL +F +KEA WA++N TSGGT EQ+ LV+ G ++PL +L D + + V L+ + NI K+GE EK LVEE GLEKIE LQ+HDN+ +Y A+ ++E Y+ E+ + IA Sbjct: 374 PLVDLLNKGDFKAQKEAVWAVTNYTSGGTVEQVVQLVQCGVLEPLLNLLTIKDSKTILVILDAISNIFLAAEKLGEQEK-----------LCLLVEELGGLEKIEALQTHDNHMVYHAALALIEKYFSGEEADDIA 498
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA2_XENLA (Importin subunit alpha-2 OS=Xenopus laevis GN=kpna2 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.489e-21 Identity = 62/158 (39.24%), Postives = 89/158 (56.33%), Query Frame = 3 Query: 3 PLVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENIL----KVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEDDETIAAGDGPQPGFPYAGNEV---QVP 455 PLV+LL+ +F +KEA WA++N TSGGT EQ+ LV+ G ++PL +L D + + V L+ + NI K+GE EK LVEE GLEKIE LQ+HDN +Y A+ ++E Y+ E+ + + A + P GN+ QVP Sbjct: 374 PLVDLLKKGDFKAQKEAVWAVTNYTSGGTVEQVVQLVQCGVLEPLLNLLTIKDSKTILVILDAISNIFLAAEKLGEQEK-----------LCLLVEELGGLEKIEALQTHDNRMVYHAALALIEKYFSGEEADEMNALE------PEVGNDAYTFQVP 514
BLAST of FC875373 vs. ExPASy Swiss-Prot
Match: IMA3_MOUSE (Importin subunit alpha-3 OS=Mus musculus GN=Kpna3 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.761e-20 Identity = 50/126 (39.68%), Postives = 79/126 (62.70%), Query Frame = 3 Query: 6 LVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVREGCIKPLCDLFVCPDPRIVTVCLEGLENILKVGEAEKNMGTATADVNQYAQLVEEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEED 383 +++ L +F +KEAAWAISN T G +Q++YLV++ I P C+L D ++V V L+GL+NIL + A + + A+++EE GLEKIE LQ H+N +IY+ A +I++ Y+ +D Sbjct: 373 IIHQLAKGDFGTQKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLDGLKNILIM---------AGDEASTIAEIIEECGGLEKIEVLQQHENEDIYKLAFEIIDQYFSGDD 489 The following BLAST results are available for this feature:
BLAST of FC875373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875373 ID=FC875373; Name=FC875373; organism=Citrus clementina; type=EST; length=726bpback to top |