FC875375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBPL_DICDI (Nucleotide-binding protein-like OS=Dictyostelium discoideum GN=nubpl PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.134e-29 Identity = 65/135 (48.15%), Postives = 85/135 (62.96%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 ++ I NI+AVSS KGGVGKST AVN+A L+ VG+ D DV+GPS+P M+ +N E +IP + G+K +S GF + I RGPMV + +LL T+WG LD LV D+PPGTGD LT+CQ Sbjct: 53 IEGIKNIIAVSSAKGGVGKSTCAVNIALGLSSHNLSVGLLDVDVFGPSIPLMMDLKNHEKPFTNELNQMIPLQNYGIKCMSMGFLVNEDDPIIWRGPMVGSALEKLLRQTDWGHLDVLVCDLPPGTGDAILTMCQ 187
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: MRP_MYCTU (Protein mrp homolog OS=Mycobacterium tuberculosis GN=mrp PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.134e-29 Identity = 80/250 (32.00%), Postives = 123/250 (49.20%), Query Frame = 2 Query: 5 TGTAEND----VLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMSAQP---------------ARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGFSGQGR--AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 +GT + D + AL ++IDP+ I G VK + G V + LT CP K +R V +P + V V++ P+ P+ L ++ AV+S KGGVGKSTV VNLA +A G +G+ DAD++G S+P M+ +R ++ + I+P VK++S QG + RGPM+ + Q L WG+LD L++D+PPGTGD+ +++ Q Sbjct: 2 SGTRDGDLNAAIRTALGKVIDPELRRPITELGMVKSIDTGPD-GSVHVEIYLTIAGCPKKSEITERVTRAVADVPGTSAVRVSLDVMSDEQRTELRKQLRGDTREPVIPFAQPDSLTRV---YAVASGKGGVGKSTVTVNLAAAMAVRGLSIGVLDADIHGHSIPRMMGTTDRPTQV---ESMILPPIAHQVKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVYWGDLDVLLLDLPPGTGDVAISVAQ 244
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: MRP_MYCBO (Protein mrp homolog OS=Mycobacterium bovis GN=mrp PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.134e-29 Identity = 80/250 (32.00%), Postives = 123/250 (49.20%), Query Frame = 2 Query: 5 TGTAEND----VLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMSAQP---------------ARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGFSGQGR--AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 +GT + D + AL ++IDP+ I G VK + G V + LT CP K +R V +P + V V++ P+ P+ L ++ AV+S KGGVGKSTV VNLA +A G +G+ DAD++G S+P M+ +R ++ + I+P VK++S QG + RGPM+ + Q L WG+LD L++D+PPGTGD+ +++ Q Sbjct: 2 SGTRDGDLNAAIRTALGKVIDPELRRPITELGMVKSIDTGPD-GSVHVEIYLTIAGCPKKSEITERVTRAVADVPGTSAVRVSLDVMSDEQRTELRKQLRGDTREPVIPFAQPDSLTRV---YAVASGKGGVGKSTVTVNLAAAMAVRGLSIGVLDADIHGHSIPRMMGTTDRPTQV---ESMILPPIAHQVKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVYWGDLDVLLLDLPPGTGDVAISVAQ 244
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: Y283_METJA (Uncharacterized ATP-binding protein MJ0283 OS=Methanocaldococcus jannaschii GN=MJ0283 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.806e-27 Identity = 67/141 (47.52%), Postives = 88/141 (62.41%), Query Frame = 2 Query: 278 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 ++ E + KI + + + S KGGVGKSTV VNLA L MG +VG+ DAD++GP++P M+ EN P I T+ G+K +S G+ + I RGP VSG I Q L+ WGELDYL+ID PPGTGD QLT+ Q Sbjct: 30 KIRENMSKIKHKIVILSGKGGVGKSTVTVNLAAALNLMGKKVGVLDADIHGPNIPKMLGVENTQPMAGPAGIFPIVTKD-GIKTMSIGYLLPDDKTPVIWRGPKVSGAIRQFLSDVVWGELDYLLIDTPPGTGDEQLTIMQ 169
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: IND1_YARLI (Iron-sulfur protein IND1 OS=Yarrowia lipolytica GN=IND1 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.197e-27 Identity = 70/172 (40.70%), Postives = 100/172 (58.14%), Query Frame = 2 Query: 188 RANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTM--VSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 R++E L IP + ++ P P + PE + + + VSS KGGVGKSTV+VN A +LA G RVG+ D D++GPS+PTM +S E R+ + +IP G++++S GF RG +V + QLL +WG LD LV+D+PPGTGD+QLT+ Q Sbjct: 34 RSHENPLGIP------KSPASAPRIPRKTTRRPEPIAGVKKTIVVSSAKGGVGKSTVSVNTALSLAKRGLRVGLLDVDIFGPSIPTMFGLSGEPRM----THEGKLIPMSKFGIQVMSMGFLVDPNKAVAWRGLLVQKALEQLLQDVDWGTLDVLVMDLPPGTGDVQLTIAQ 195
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: SALA_BACSU (Protein mrp homolog salA OS=Bacillus subtilis GN=salA PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.398e-26 Identity = 76/232 (32.76%), Postives = 123/232 (53.02%), Query Frame = 2 Query: 17 ENDVLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQK----ISN---IVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNP--EKRTIIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQL 679 E++V K + ++ +P + VK+++I +S ++ L + +Q V+ V + P + + P +K + N +AV+S KGGVGKSTV+VNLA +LA +G +VG+ DAD+YG S+P M+ + + P E ++P E GVK++S GF + A + RGPM+ ++N EWGE+DY+V+D+PPGTGD+ L Sbjct: 4 EDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKTGTAEQMQIQQEIVNVLKGAG-AETVGLRFEELPEETVAKFRAPSAEKKTLLNMDNPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMG-----ITVRPTIEGEKLLPVERFGVKVMSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIVLDLPPGTGDVAL 229
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: MRP_RICPR (Protein mrp homolog OS=Rickettsia prowazekii GN=mrp PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25 Identity = 63/159 (39.62%), Postives = 92/159 (57.86%), Query Frame = 2 Query: 221 VNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 VNK+ + + A++ ++ + I+ V+S KGGVGKST++ +A L+ RVGI DAD+YGPS+P + + E R I+P ++++S GF I RGPM S +I QLL+ T W LDYL+IDMPPGTGDI L++ + Sbjct: 69 VNKITIVFTQSKTIDKKAQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLENYRVGIVDADIYGPSIPHIFGING--IPKTVEGR-IVPILAQNIQIISIGFFVKAHSAIIYRGPMASKIIYQLLSNTRWNNLDYLIIDMPPGTGDIHLSIIE 224
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: MRP_RICFE (Protein mrp homolog OS=Rickettsia felis GN=mrp PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25 Identity = 63/163 (38.65%), Postives = 93/163 (57.06%), Query Frame = 2 Query: 221 VNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT----IIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 +NK+ + + A++ ++ + I+ V+S KGGVGKST++ +A L+ RVGI DAD+YGPS+P + +N +T IIP ++++S GF I RGPM S I QLL+ T+W LDYL+IDMPPGTGDI L++ + Sbjct: 69 INKITIVFTESKPMEKKAQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLENYRVGIVDADIYGPSIP-------HIFGINEVPKTKDGRIIPITVKSIQVISIGFFVKDHSAIIWRGPMASKTIYQLLSVTKWDNLDYLIIDMPPGTGDIHLSMLE 224
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: MRP_RICCN (Protein mrp homolog OS=Rickettsia conorii GN=mrp PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24 Identity = 72/210 (34.29%), Postives = 107/210 (50.95%), Query Frame = 2 Query: 107 INEALGEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFAEQLP---------EGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT----IIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 +NE + ++ + + I + A E+ L +NK+N +F E P ++ + I+ V+S KGGVGKST++ +A L+ RVGI DAD+YGPS+P + +N +T IIP ++++S GF I RGPM S I QLL+ T+W LDYL+IDMPPGTGDI L++ + Sbjct: 24 LNEVISDIIIKGNNIGFSIDISGKNKLEAEEIRLKA--INKLNEISEVNKITIVFTESKPMEKKVQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLANYRVGIVDADIYGPSIP-------HIFGINEVPQTKDGRIIPVLAQSIEIISIGFFVKDHSAIIWRGPMASKTIYQLLSVTKWDNLDYLIIDMPPGTGDIHLSILE 224
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: MRP_RICBR (Protein mrp homolog OS=Rickettsia bellii (strain RML369-C) GN=mrp PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24 Identity = 66/181 (36.46%), Postives = 100/181 (55.25%), Query Frame = 2 Query: 167 IKDMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT----IIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 IK+ ++ NE+V + K+ + + ++ ++ + I+ V+S KGGVGKST++ +A L+ RVGI DAD+YGPS+P + +N +T IIP ++++S GF I RGPM S I QLL+ T+W LDYL+IDMPPGTGDI L++ + Sbjct: 55 IKNTAIKKLNEIV----GIGKITIVFTESKTVEKKPQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLENHRVGIVDADIYGPSIP-------HIFGINEVPQTVGGRIIPVRAKNIEVISIGFFVKNYSAIIWRGPMASKTIYQLLSVTKWDNLDYLIIDMPPGTGDIHLSMLE 224 The following BLAST results are available for this feature:
BLAST of FC875375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875375 ID=FC875375; Name=FC875375; organism=Citrus clementina; type=EST; length=693bpback to top |