FC875375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_DROSI (Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila simulans GN=GD14899 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.956e-20 Identity = 54/137 (39.42%), Postives = 80/137 (58.39%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-LLEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L K+ N++ V S KGGVGKSTV+ L+ L G +VG+ D D+ GPS+P ++ E R + + + + E+ + ++S GF + R I RGP + +I Q LT W ELDYL+ID PPGT D +T+ + Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDIFQCDEGWVPVYTDEFQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYLIIDTPPGTSDEHITVME 138
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_DROGR (Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila grimshawi GN=GH14587 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.554e-20 Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-LLEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E R + + + I E + ++S GF + R I RGP + +I Q L+ +W ELDYL+ID PPGT D +T+ + Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRATGHKVGLLDIDLCGPSVPYLLGLEGRDIFQCDDGWVPIYTDESKTLAVMSIGFLLKNRTDPVIWRGPKKTMMIKQFLSDVKWDELDYLIIDTPPGTSDEHITVME 138
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_DROMO (Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila mojavensis GN=GI13405 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.336e-20 Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-LLEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E R + + + I E + ++S GF + R I RGP + +I Q LT +W +LDYL+ID PPGT D +T+ + Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRATGHKVGLLDIDLCGPSVPHLLGLEGRDIYQCDDGWVPIYTDESKTLAVMSIGFLLKNRNDPVIWRGPKKTMMIKQFLTDVKWEDLDYLIIDTPPGTSDEHITVME 138
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_DROER (Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila erecta GN=GG16127 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.336e-20 Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-LLEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L+K+ NI+ V S KGGVGKSTV+ L+ L G +VG+ D D+ GPS+P ++ E R + + + + E + ++S GF + R I RGP + +I Q LT W ELDYL+ID PPGT D +T+ + Sbjct: 2 LEKVKNIIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDIFQCDEGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYLIIDTPPGTSDEHITVME 138
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NBP22_DROYA (Cytosolic Fe-S cluster assembly factor NUBP2 homolog 2 OS=Drosophila yakuba GN=GE19695 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.336e-20 Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-LLEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L+K+ NI+ V S KGGVGKSTV+ L+ L G +VG+ D D+ GPS+P ++ E R + + + + E + ++S GF + R I RGP + +I Q LT W ELDYL+ID PPGT D +T+ + Sbjct: 2 LEKVKNIIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDIFQCDEGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYLIIDTPPGTSDEHITVME 138
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NBP21_DROYA (Cytosolic Fe-S cluster assembly factor NUBP2 homolog 1 OS=Drosophila yakuba GN=GE23241 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.336e-20 Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-LLEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L+K+ NI+ V S KGGVGKSTV+ L+ L G +VG+ D D+ GPS+P ++ E R + + + + E + ++S GF + R I RGP + +I Q LT W ELDYL+ID PPGT D +T+ + Sbjct: 2 LEKVKNIIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDIFQCDEGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYLIIDTPPGTSDEHITVME 138
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: CFD1_YARLI (Cytosolic Fe-S cluster assembly factor CFD1 OS=Yarrowia lipolytica GN=CFD1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.336e-20 Identity = 57/144 (39.58%), Postives = 83/144 (57.64%), Query Frame = 2 Query: 272 AEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTE-YLGVKLVSFGF--SGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 A Q L + NIV V S KGGVGKS+V LA TLA G +VG+ D D+ GPS+P E++ + + + T+ + L+S GF S +G +++ RGP + +I Q + WGELDYL+ID PPGT D +++ + Sbjct: 5 ATQSSPSLAGVKNIVLVLSGKGGVGKSSVTTQLALTLAAQGKKVGVLDIDLTGPSIPRFFGMEDKQVYQSSAGWVPVYTDASRNLCLMSLGFLLSSRGDSVVWRGPRKTAMIRQFIRDVVWGELDYLLIDTPPGTSDEHISIAE 148
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: Y851_PYRAB (Uncharacterized ATP-binding protein PYRAB08510 OS=Pyrococcus abyssi GN=PYRAB08510 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.690e-20 Identity = 65/152 (42.76%), Postives = 89/152 (58.55%), Query Frame = 2 Query: 275 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEK-----RTIIP--TEYLG----VKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 +++ E +K VAV S KGGVGKSTVAVNL LA MG VGI DAD++GP++ M+ E E+ EK +IP +++G +K++S G I RG +V+ I QLL +WG LD+++ID PPGTGD LT+ Q Sbjct: 20 QRIKEKEKKWKYKVAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPNVAKMLGVEKE--EIYAEKFDDGHFEMIPPMADFMGQVTPIKVMSMGMMVPEDQPIIWRGALVTKAIKQLLGDVKWGSLDFMIIDFPPGTGDEILTVVQ 169
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_DROSE (Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila sechellia GN=GM22307 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.431e-20 Identity = 54/137 (39.42%), Postives = 79/137 (57.66%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-LLEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L K+ N++ V S KGGVGKSTV+ L+ L G +VG+ D D+ GPS+P ++ E R + + + + E + ++S GF + R I RGP + +I Q LT W ELDYL+ID PPGT D +T+ + Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDIFQCDEGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYLIIDTPPGTSDEHITVME 138
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_DROME (Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila melanogaster GN=CG4858 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.431e-20 Identity = 54/137 (39.42%), Postives = 79/137 (57.66%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-LLEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L K+ N++ V S KGGVGKSTV+ L+ L G +VG+ D D+ GPS+P ++ E R + + + + E + ++S GF + R I RGP + +I Q LT W ELDYL+ID PPGT D +T+ + Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDIFQCDDGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYLIIDTPPGTSDEHITVME 138 The following BLAST results are available for this feature:
BLAST of FC875375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875375 ID=FC875375; Name=FC875375; organism=Citrus clementina; type=EST; length=693bpback to top |