FC875375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_TRIAD (Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Trichoplax adhaerens GN=TRIADDRAFT_53697 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.291e-19 Identity = 53/135 (39.26%), Postives = 78/135 (57.78%), Query Frame = 2 Query: 299 KISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTII---PTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 KI ++V + S KGGVGKSTVA +A LA G +VGI D D+ GPS+P ++ E++ + + + E L V + F A++ RGP + +I Q L+ WG+LDYL+ID PPGT D +T+ + Sbjct: 12 KIKSVVLILSGKGGVGKSTVASQIALELANGGNKVGILDVDLCGPSIPRVLGLEDKDVHQCADGWIPVYADKNEKLAVMSIGFLLRNSKDAVVWRGPKKNAMIKQFLSDVVWGDLDYLIIDTPPGTSDEHITVAE 146
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_HUMAN (Cytosolic Fe-S cluster assembly factor NUBP2 OS=Homo sapiens GN=NUBP2 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.291e-19 Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 284 PEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL-EMNPEKRTIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGD 670 P L + +I+ V S KGGVGKST++ LA L G +VGI D D+ GPS+P M+ + R + + + + + L+S GF + RGP + +I Q ++ WGELDYLV+D PPGT D Sbjct: 7 PGNLAGVRHIILVLSGKGGVGKSTISTELALALRHAGKKVGILDVDLCGPSIPRMLGAQGRAVHQCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSDVAWGELDYLVVDTPPGTSD 139
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUP1B_XENLA (Cytosolic Fe-S cluster assembly factor nubp1-B OS=Xenopus laevis GN=nubp1-B PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18 Identity = 54/142 (38.03%), Postives = 81/142 (57.04%), Query Frame = 2 Query: 275 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 E++ E + + + + V S KGGVGKST + +LA+ LA G V + D D+ GPS+P M+ E + + + + E L V V F S A++ RGP +G+I Q L +WGE+DYL++D PPGT D L++ Q Sbjct: 48 EEIKEKMSLVKHKILVLSGKGGVGKSTFSAHLAHGLAQDEGKEVALLDVDICGPSIPRMMGLEGEQVHQSGSGWSPVYVEDNLAVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIVDTPPGTSDEHLSVVQ 189
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP1_RAT (Cytosolic Fe-S cluster assembly factor NUBP1 OS=Rattus norvegicus GN=Nubp1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18 Identity = 55/142 (38.73%), Postives = 84/142 (59.15%), Query Frame = 2 Query: 275 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMG-ARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 E++ E ++ + + + V S KGGVGKST + +LA+ LA G +V + D D+ GPS+P ++ E + + + + E LGV V F S A++ RGP +G+I Q L +WG++DYLVID PPGT D L++ Q Sbjct: 44 EEIREKMKTVRHRILVLSGKGGVGKSTFSAHLAHGLAEDGDTQVALLDIDICGPSIPKIMGLEGEQVHQSGSGWSPVYVEDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGDVDYLVIDTPPGTSDEHLSVVQ 185
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_RAT (Cytosolic Fe-S cluster assembly factor NUBP2 OS=Rattus norvegicus GN=Nubp2 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 50/133 (37.59%), Postives = 74/133 (55.64%), Query Frame = 2 Query: 284 PEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL-EMNPEKRTIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGD 670 P L + +I+ V S KGGVGKST++ LA L G +VGI D D+ GPS+P M+ + + + + + + + + L+S GF + + RGP +I Q ++ WGELDYLV+D PPGT D Sbjct: 7 PGNLAGVRHIILVLSGKGGVGKSTISTELALALRHQGKKVGILDVDLCGPSIPHMLHAQGKAVHQCDSGWVPVFVDQEQSISLMSVGFLLENPDEAVVWRGPKKHALIKQFVSDVAWGELDYLVVDTPPGTSD 139
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_MONBE (Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Monosiga brevicollis GN=33756 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 56/142 (39.44%), Postives = 78/142 (54.93%), Query Frame = 2 Query: 269 FAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTL 685 F E L + L + +IV V S KGGVGKSTVA +A L G +VG+ D D+ GPS+PTM ++ + + E + + ++S GF S I RGP + +I Q L+ W ELD LV+D PPGT D L++ Sbjct: 7 FYETLKQRLAGVKHIVLVLSGKGGVGKSTVASQMAIGLIHRGLKVGLLDIDLTGPSIPTMFGVADQQVHTSSEGWVPLYKYDQRLAIMSIGFLLDSRDEAVIWRGPKKNAMIQQFLSEVCWDELDCLVVDTPPGTSDEHLSI 148
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP1_XENTR (Cytosolic Fe-S cluster assembly factor nubp1 OS=Xenopus tropicalis GN=nubp1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 55/142 (38.73%), Postives = 82/142 (57.75%), Query Frame = 2 Query: 275 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 E++ E L + + + V S KGGVGKST + +LA+ LA ++ V + D D+ GPS+P M+ E + + + + E L V V F S A++ RGP +G+I Q L +WGE+DYL+ID PPGT D L++ Q Sbjct: 48 EEIKEKLSSVKHKILVLSGKGGVGKSTFSAHLAHGLAQDESKEVALLDVDICGPSIPKMMGLEGEQVHQSGSGWSPVYVEDNLAVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIIDTPPGTSDEHLSVVQ 189
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUP1A_XENLA (Cytosolic Fe-S cluster assembly factor nubp1-A OS=Xenopus laevis GN=nubp1-A PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 62/181 (34.25%), Postives = 93/181 (51.38%), Query Frame = 2 Query: 161 CPIKDMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFA-EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 CP D E + P ++ S A P A E++ E + + + + V S KGGVGKST + +LA+ LA G V + D D+ GPS+P M+ E + + + + E L V V F S A++ RGP +G+I Q L +WG++DYL++D PPGT D L++ Q Sbjct: 12 CPGTDSTEAGKSSACQGCP---NQSICASGAAAGPDPAIEEIKEKMSLVKHKILVLSGKGGVGKSTFSAHLAHGLAQDEGKEVALLDVDICGPSIPKMMGLEGEQVHQSGSGWSPVYVEDNLAVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGDVDYLIVDTPPGTSDEHLSVVQ 189
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_BOVIN (Cytosolic Fe-S cluster assembly factor NUBP2 OS=Bos taurus GN=NUBP2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 284 PEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT-IIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGD 670 P L + +IV V S KGGVGKST++ LA L G +VGI D D+ GPS+P M+ + R + + + L+S GF + RGP + +I Q ++ WG+LDYL++D PPGT D Sbjct: 7 PGNLAGVRHIVLVLSGKGGVGKSTISTELALALRHAGKKVGILDVDLCGPSIPRMLRAQGRAVHQGDSGWVPVFVDREQSISLMSVGFLLEQPDEAVVWRGPKKNALIKQFVSDVAWGQLDYLLVDTPPGTSD 139
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP1_BOVIN (Cytosolic Fe-S cluster assembly factor NUBP1 OS=Bos taurus GN=NUBP1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 52/142 (36.62%), Postives = 83/142 (58.45%), Query Frame = 2 Query: 275 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT-IIPTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 E++ E ++ + + + V S KGGVGKST + +LA+ LA +V + D D+ GPS+P ++ E + + + + + LGV V F S A++ RGP +G+I Q L +WGE+DYL++D PPGT D L++ Q Sbjct: 44 EEIKEKMKTVKHKILVLSGKGGVGKSTFSAHLAHGLAEDENTQVALLDIDICGPSIPKIMGLEGEQVHQSGSGWSPVFLEDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIVDTPPGTSDEHLSVVQ 185 The following BLAST results are available for this feature:
BLAST of FC875375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875375 ID=FC875375; Name=FC875375; organism=Citrus clementina; type=EST; length=693bpback to top |