FC875375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: CFD1_GIBZE (Cytosolic Fe-S cluster assembly factor CFD1 OS=Gibberella zeae GN=CFD1 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 57/144 (39.58%), Postives = 80/144 (55.56%), Query Frame = 2 Query: 290 GLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTII------PTEYLG-VKLVSFGF--SGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 GL K+ +I+ V S KGGVGKS+V LA +L G VGI D D+ GPS+P M+S E + P + ++ LG + +S GF +G A++ RGP + +I Q L W E DYL+ID PPGT D ++L + Sbjct: 2 GLTKVKHIILVLSGKGGVGKSSVTTQLALSLTSAGHSVGILDVDLTGPSIPRMLSIEASKVTQVPGGWAPVLVHEADESKGLGSLHAMSLGFLLPKRGDAVVWRGPKKTAMIRQFLKDVLWDETDYLLIDTPPGTSDEHISLAE 145
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_XENTR (Cytosolic Fe-S cluster assembly factor nubp2 OS=Xenopus tropicalis GN=nubp2 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-LLEMNPEKRTIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGD 670 L + +I+ V S KGGVGKST++ +A L G +VGI D D+ GPS+P M++ +++ + + + + + + L+S GF + RGP + +I Q + WG+LD+L++D PPGT D Sbjct: 10 LSGVQHIILVLSGKGGVGKSTISTEIALALRHAGKKVGILDVDLCGPSIPRMLNAQSKDVHQCDSGWVPVYVDQEKSISLMSIGFLLEHPDDAVVWRGPKKNALIKQFASDVAWGDLDFLIVDTPPGTSD 139
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NBP35_CRYNE (Cytosolic Fe-S cluster assembly factor NBP35 OS=Cryptococcus neoformans GN=NBP35 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 56/151 (37.09%), Postives = 81/151 (53.64%), Query Frame = 2 Query: 254 PARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAG-MGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYL-GVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 P P+ E++ +KI V S KGGVGKST L++ LA + GI D D+ GPS+P ++ E+ + + + P L + ++S GF S I RGP +G+I Q L EWG+LDY+V+D PPGT D L++ Q Sbjct: 67 PDLPLIRERMSSVRRKI----LVLSGKGGVGKSTFTAGLSWALAADEECQAGIMDIDICGPSIPLLMGLESSTIHTSASGWS--PAYALDNLAVMSIGFLLPSSSDAVIWRGPKKNGLIKQFLKDVEWGDLDYMVVDTPPGTSDEHLSIVQ 211
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: CFD1_SCHJY (Probable cytosolic Fe-S cluster assembly factor SJAG_02895 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=SJAG_02895 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 48/148 (32.43%), Postives = 82/148 (55.41%), Query Frame = 2 Query: 281 LPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-----GMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIP-----TEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 + + L+ + +I+ V S KGGVGKS+V LA +L R+G+ D D+ GPS+P M + ++ +P T+ +G+ ++F S + +++ RGP + +I Q ++ WG++DYL+ID PPGT D LT+ + Sbjct: 1 MADSLENVKHIILVLSGKGGVGKSSVTTQLALSLHETPFYSRKLRIGVLDIDLTGPSIPRMFGMDAETHRIHQSSSGWVPVYTDETKEIGLMSLAFLLSSKNDSVVWRGPKKAAMIRQFVSDVNWGDIDYLLIDTPPGTSDEHLTIVE 148
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: CFD1_NEUCR (Cytosolic Fe-S cluster assembly factor CFD1 OS=Neurospora crassa GN=cfd-1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 55/143 (38.46%), Postives = 82/143 (57.34%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTII------PTEYLG-VKLVSFGF--SGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L K+ +IV V S KGGVGKS+V LA +L+ G VG+ D D+ GPS+P M E+ + P I P+ +G ++++S GF +G A++ RGP + ++ Q L+ W E DYL+ID PPGT D ++L + Sbjct: 3 LAKVKHIVLVLSGKGGVGKSSVTTQLALSLSLAGHSVGVLDVDLTGPSIPRMFGIEDAKVTQAPGGWLPITVHEADPSAGVGSLRVMSLGFLLPKRGDAVVWRGPKKTAMVRQFLSDVFWDETDYLLIDTPPGTSDEHISLAE 145
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP1_NEMVE (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Nematostella vectensis GN=v1g236650 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 56/156 (35.90%), Postives = 86/156 (55.13%), Query Frame = 2 Query: 236 VTMSAQPARPI-FAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 + S++PA P ++ E L + + + V S KGGVGKST +LA+ LA R V + D D+ GPS+PT+ + + + + + E LGV V F + A++ RGP +G+I Q L +WG+ D+LV+D PPGT D L++ Q Sbjct: 34 ICASSKPAPPDPDLGKIKERLSSVKHKILVLSGKGGVGKSTFTAHLAHGLAADEDRQVAVLDIDICGPSIPTVFGLQGEQVHQSGSGWSPVYVEDNLGVMSVGFLLAKPTDAVIWRGPKKNGLIKQFLRDVDWGDADFLVVDTPPGTSDEHLSIIQ 189
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NBP35_PHANO (Cytosolic Fe-S cluster assembly factor NBP35 OS=Phaeosphaeria nodorum GN=NBP35 PE=3 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTL-AGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEK-RTIIPTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTL 685 L + + + V S KGGVGKST + L++ A + VG+ D D+ GPS+P M+ E + + + +E LGV V F + A++ RGP +G+I + L +WGELD+L++D PPGT D L++ Sbjct: 72 LSSVKHKILVLSGKGGVGKSTFSTMLSHGFSANPDSTVGLMDTDICGPSIPKMMGVEEETIHTTADGWEPVWVSENLGVMSVQFMLPNRDDAVIWRGPKKNGLIKKFLMDVKWGELDFLIVDTPPGTSDEHLSV 205
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NBP35_CHAGB (Cytosolic Fe-S cluster assembly factor NBP35 OS=Chaetomium globosum GN=NBP35 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 51/134 (38.06%), Postives = 76/134 (56.72%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTII-PTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTL 685 L + + + V S KGGVGKST+ LA LA A VG+ D D+ GPS+P M+ E + ++ + + + L V + F + AI+ RGP +G+I Q L EWG+LD+L++D PPGT D L++ Sbjct: 74 LAGVKHKILVLSGKGGVGKSTLTAQLAQALATNPEATVGVMDTDICGPSIPKMLGVEAETIHVSGSGWSPVWAADNLAVMSIQFMLPNRDDAIIWRGPKKNGLIKQFLKDVEWGDLDFLLVDTPPGTSDEHLSV 207
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: CFD1_USTMA (Cytosolic Fe-S cluster assembly factor CFD1 OS=Ustilago maydis GN=CFD1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17 Identity = 52/145 (35.86%), Postives = 80/145 (55.17%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMG--------ARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTE---YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L +S+I+ V S KGGVGKS+V+ LA +L+ ARVGI D D+ GPS+P M+ ++ + + + T+ +L V V F + +++ RGP + +I Q L WG LDYL+ID PPGT D +++ + Sbjct: 25 LSSVSHIILVLSGKGGVGKSSVSAQLALSLSSSASPSDRSRMARVGILDIDLTGPSIPRMLGLGGASVKQSTDGWVPVYTDASQHLAVMSVGFLLRSKNDSVVWRGPKKNAMIKQFLGDVRWGTLDYLIIDTPPGTSDEHISILE 169
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NBP35_DEBHA (Cytosolic Fe-S cluster assembly factor NBP35 OS=Debaryomyces hansenii GN=NBP35 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 59/159 (37.11%), Postives = 82/159 (51.57%), Query Frame = 2 Query: 254 PARPIFAEQLPEG-----------LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAG-MGARVGIFDADVYGPSLPTMVSPENRLL-EMNPEKRTIIPTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGE-LDYLVIDMPPGTGDIQLTL 685 P + I + QLP+G L +I + + V S KGGVGKST L++ LA VG D D+ GPSLP M+ E + + N + + LG+ +SF A++ RG +G+I Q L WGE LDYLV+D PPGT D L++ Sbjct: 38 PNQSICSSQLPQGPDPDLPLINKRLSQIDHKILVLSGKGGVGKSTFTSMLSWALAADEDIEVGAMDLDICGPSLPRMLGAEGESIHQSNSGWSPVYVADNLGLMSISFMLPDADSAVIWRGAKKNGLIKQFLKDVNWGEHLDYLVVDTPPGTSDEHLSV 196 The following BLAST results are available for this feature:
BLAST of FC875375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875375 ID=FC875375; Name=FC875375; organism=Citrus clementina; type=EST; length=693bpback to top |