FC875380

Overview
NameFC875380
Unique NameFC875380
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length664
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15219 contig Ccv1_Contig15219:114..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_THEMA (Pyrophosphate-energized proton pump OS=Thermotoga maritima GN=hppA PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 9.164e-57
Identity = 112/228 (49.12%), Postives = 158/228 (69.30%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSR-----------AAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLV 651
            NTTAAIGKGFAIGSA   +L+LF +++             + +  +++L  +V  G ++GA + Y+FS   + +V  AA+KMV+E+RRQ   I GL+EG AKPDY  C++I++D ++K+M  P  + +LTPL+ G   G E + GVL G+++SG  +AI  +N+GGAWDNAKKY+EAG  E       KGS+PHKA VIGDT+GDPLKDT GPSL+ILIK+M+V S++
Sbjct:  492 NTTAAIGKGFAIGSAIFAALSLFASYMFSQISPSDIGKPPSLVLLLNMLDARVIAGALLGAAITYYFSGYLISAVTKAAMKMVDEIRRQAREIPGLLEGKAKPDYNRCIEITSDNALKQMGYPAFIAILTPLVTGFLLGAEFVGGVLIGTVLSGAMLAILTANSGGAWDNAKKYLEAGNLEGY----GKGSEPHKALVIGDTVGDPLKDTVGPSLDILIKIMSVVSVI 715          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_THETN (Pyrophosphate-energized proton pump OS=Thermoanaerobacter tengcongensis GN=hppA PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.666e-56
Identity = 113/227 (49.78%), Postives = 154/227 (67.84%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRA---------AISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVF 654
            NTT A+ KG+AIGSAAL +  LF A++            +   VD+  P+VFIG  +GAM+ Y FS+  +++VG AA  ++ EVRRQF  I G+MEGTAKPDYA  V I T  ++KEM+ PG +V++TP++VG+  G E  +  L    +SGV +A+  +N GGAWDNAKK+IE G        G KGSD HKA+V+GDT+GDP KDT+GPSL++LIKL++  +LVF
Sbjct:  486 NTTKALTKGYAIGSAALATFLLFSAYLDEVKKILGKPIDSWFPVDIGKPEVFIGAFIGAMIVYLFSSTAIRAVGKAAQYVILEVRRQFREIPGIMEGTAKPDYARAVDIVTKGALKEMVIPGLIVVVTPILVGVILGKEAAAAFLMIGTISGVILALYLNNGGGAWDNAKKFIELG------NYGGKGSDAHKASVVGDTVGDPFKDTAGPSLHVLIKLISTITLVF 706          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA2_METMA (Pyrophosphate-energized proton pump 2 OS=Methanosarcina mazei GN=hppA2 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.666e-56
Identity = 109/222 (49.10%), Postives = 156/222 (70.27%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAIST--VDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 660
            NTT A+ KG+AIGS AL +LALF  + ++ ++ +  + + +P V  G+++GA+LP+ FSA+ M +VG AA ++V EVRRQF  I G+MEGTAKP+Y  CV I T A++ +M  PG L ++ PL+ G F G E L+G+L G +V G  +A+   N GGAWDNAKK IE G        G KGS+ H+AAV+GDT+GDP KDT+GP+LN LIK++ + +++F+P
Sbjct:  448 NTTKAVTKGYAIGSTALGALALFADYRNKVSLESQSISLDSPVVLSGILLGAVLPFLFSAVMMSAVGKAAFEVVNEVRRQFREIPGIMEGTAKPEYGRCVDIVTKAALHDMAMPGFLAVIIPLLTGFFLGPEALAGLLTGLIVVGFMLALMMDNGGGAWDNAKKLIEDG------YYGGKGSEAHRAAVVGDTVGDPFKDTAGPALNSLIKVVNMVAILFSP 663          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_CHLAA (Pyrophosphate-energized proton pump OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=hppA PE=3 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.013e-55
Identity = 112/236 (47.46%), Postives = 160/236 (67.80%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRA----------------AISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 660
            NTT A+ KG AIGSA + ++AL+G++ +                   +++++V  P VFIGL++G  +P+ FSA+T+++V  AA ++V EVRRQF  I GLMEG  +PDYA  V+IST A+ KE+I  G + ++ P+IVG   GVE L G LAG +++G  +A+  +N GGAWDNAKKYIE G        G K S+PHKAAV+GDT+GDPLKDT+GP+LN +IK++ + +L+ AP
Sbjct:  499 NTTKAVTKGIAIGSAVIAAVALYGSYFTDVNKVLQQMINEGRQGIELLASINVAAPPVFIGLLIGGAVPFLFSALTIRAVSRAAAQIVNEVRRQFR-IPGLMEGKVQPDYARAVQISTTAAQKELISLGLIAVMVPIIVGFTLGVEALGGFLAGIILTGQLMAVFQANAGGAWDNAKKYIEEG------NFGGKHSEPHKAAVVGDTVGDPLKDTAGPALNPMIKVINLVALIIAP 727          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_NITEU (Pyrophosphate-energized proton pump OS=Nitrosomonas europaea GN=hppA PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.323e-55
Identity = 114/224 (50.89%), Postives = 152/224 (67.86%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAA----ISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 660
            NTT A+ KG+AIGSA L +L LF  +         + T D+    V IGL +G M+P+ F AM+M++VG AA  +V EVRRQF  I G+M+G+ KPDY+  V + T A+I+EMI P  L +L P++VG+F G + L GVL GS+V+G+ IAIS +  GGAWDNAKKYIE G        G KGSD HKAAV GDT+GDP KDT+GP++N LIK++ + +L+  P
Sbjct:  466 NTTKAVTKGYAIGSAGLAALVLFADYTHGLEHANKLMTFDLSNHLVIIGLFIGGMVPFLFGAMSMEAVGRAAGSVVLEVRRQFKEIPGIMDGSRKPDYSRAVDMLTKAAIREMIVPSLLPVLIPVLVGVFLGPQALGGVLMGSIVTGLFIAISMTAGGGAWDNAKKYIEDG------NYGGKGSDAHKAAVTGDTVGDPYKDTAGPAINPLIKIINIVALLIIP 683          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA2_RHOPA (Pyrophosphate-energized proton pump OS=Rhodopseudomonas palustris GN=hppA PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.728e-55
Identity = 109/224 (48.66%), Postives = 152/224 (67.86%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFG----AFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 660
            NTT A+ KG+AIGSA L +L LF     A  +R    + D+   +V +GL +G ++PY F++M M++VG AA  +V EVRRQF  I G+MEGTAKP+Y T V + T A+IKEMI P  L ++ P++VG+  G   L G+L G++V+G+ + IS    GGAWDNAKK IE G ++    L  KGS+ HKAAV GDT+GDP KDT+GP++N LIK++ + +L+  P
Sbjct:  458 NTTKAVTKGYAIGSAGLAALVLFADYTHALEARGMSLSFDLSDHRVIVGLFIGGLIPYLFASMAMEAVGRAAGSVVVEVRRQFRDIKGIMEGTAKPEYGTAVDMLTTAAIKEMIVPSLLPVVAPILVGMLLGPAALGGLLMGTIVTGIFVGISMCTGGGAWDNAKKLIEEGFTDANGVLHKKGSEAHKAAVTGDTVGDPYKDTAGPAVNPLIKIINIVALLIVP 681          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_BACTN (Pyrophosphate-energized proton pump OS=Bacteroides thetaiotaomicron GN=hppA PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.911e-54
Identity = 115/250 (46.00%), Postives = 151/250 (60.40%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAIS-----TVDV--------------------------LTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFA 657
            NTTAA GKGFAIGSAAL  LAL  +++    I      TVD+                          + PKV  G+ +G+M+ + F  +TM +VG AA  MV+EVRRQF  I G++ G A+PDY  CV IST  + +EM+ P  + +L P+  G+ FGV  + G+L G L +G  +AI  +N GGAWDNAKKY+E G        G KG + HKA V+GDT+GDP KDTSGPSLNILIKLM++ ++V A
Sbjct:  482 NTTAATGKGFAIGSAALTGLALLASYIEEIRIGLTRLGTVDLSMPNGDVVSTANATFVDFMNYYDVTLMNPKVLSGMFLGSMMAFLFCGLTMNAVGRAAGHMVDEVRRQFREIKGILTGEAEPDYERCVAISTKGAQREMVIPSLIAILAPIATGLIFGVTGVLGLLIGGLSTGFVLAIFMANAGGAWDNAKKYVEEG------NFGGKGGEVHKATVVGDTVGDPFKDTSGPSLNILIKLMSMVAIVMA 725          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_XANCP (Pyrophosphate-energized proton pump OS=Xanthomonas campestris pv. campestris GN=hppA PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.239e-53
Identity = 109/226 (48.23%), Postives = 149/226 (65.93%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAA------ISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 660
            NTT A+ KG+AIGSAAL +L LF  +           +   D+    V IGL++G ++PY F AM M++VG AA  +VEEVRRQF  I G+M GTAKP Y   V + T ++I+EMI P  L ++ P+IVG+  G   L G+L G++V+G+ +AIS +  GGAWDNAKKYIE G        G KGS+ HKAA+ GDT+GDP KDT+GP++N LIK++ + +L+  P
Sbjct:  454 NTTKAVTKGYAIGSAALAALVLFADYTHNLQAANPNEVFAFDLSDHTVIIGLLIGGLIPYLFGAMAMEAVGRAAGAVVEEVRRQFRDIPGIMTGTAKPQYDRAVDMLTRSAIREMIVPSLLPVVVPVIVGLLLGPRALGGLLIGTIVTGLFVAISMTTGGGAWDNAKKYIEDG------HFGGKGSEAHKAAITGDTVGDPYKDTAGPAINPLIKIINIVALLLVP 673          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: AVP2_ARATH (Pyrophosphate-energized membrane proton pump 2 OS=Arabidopsis thaliana GN=AVPL1 PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 4.707e-53
Identity = 112/238 (47.06%), Postives = 153/238 (64.29%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFV------SRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFF------------GVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 660
            NTT A  KGFAIGSAAL S  LF A++      +  +   VD+  P+VF+G ++GAML + FSA    +VG  A ++V EVRRQF    G+ME   KPDY+ CV I   A+++EMI PGAL + +P++VG+ F            G + ++ +L  + V G+ +A+  +  GGAWDNAKKYIE GA      LG KGS+ HKAAV GDT+GDP KDT+GPS+++LIK++A  +LV AP
Sbjct:  568 NTTKATTKGFAIGSAALASFLLFSAYMDEVSAFANVSFKEVDIAIPEVFVGGLLGAMLIFLFSAWACAAVGRTAQEVVNEVRRQFIERPGIMEYKEKPDYSRCVAIVASAALREMIKPGALAIASPIVVGLVFRILGYYTGQPLLGAKVVASMLMFATVCGILMALFLNTAGGAWDNAKKYIETGA------LGGKGSEAHKAAVTGDTVGDPFKDTAGPSIHVLIKMLATITLVMAP 799          
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_XANAC (Pyrophosphate-energized proton pump OS=Xanthomonas axonopodis pv. citri GN=hppA PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.147e-53
Identity = 108/226 (47.79%), Postives = 148/226 (65.49%), Query Frame = 1
Query:    1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAA------ISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 660
            NTT A+ KG+AIGSAAL +L LF  +           +   D+    V IGL++G ++PY F AM M++VG AA  +VEEVRRQF  + G+M GTAKP Y   V + T ++I EMI P  L ++ P+IVG+  G   L G+L G++V+G+ +AIS +  GGAWDNAKKYIE G        G KGS+ HKAA+ GDT+GDP KDT+GP++N LIK++ + +L+  P
Sbjct:  454 NTTKAVTKGYAIGSAALAALVLFADYTHNLQAANPDQVYAFDLSDHTVIIGLLIGGLIPYLFGAMAMEAVGRAAGAVVEEVRRQFRELPGIMAGTAKPQYDRAVDMLTRSAIGEMIVPSLLPVVVPIIVGLLLGPRALGGLLIGTIVTGLFLAISMTTGGGAWDNAKKYIEDG------HFGGKGSEAHKAAITGDTVGDPYKDTAGPAINPLIKIINIVALLLVP 673          
The following BLAST results are available for this feature:
BLAST of FC875380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
HPPA_THEMA9.164e-5749.12Pyrophosphate-energized proton pump OS=Thermotoga ... [more]
HPPA_THETN2.666e-5649.78Pyrophosphate-energized proton pump OS=Thermoanaer... [more]
HPPA2_METMA2.666e-5649.10Pyrophosphate-energized proton pump 2 OS=Methanosa... [more]
HPPA_CHLAA1.013e-5547.46Pyrophosphate-energized proton pump OS=Chloroflexu... [more]
HPPA_NITEU1.323e-5550.89Pyrophosphate-energized proton pump OS=Nitrosomona... [more]
HPPA2_RHOPA1.728e-5548.66Pyrophosphate-energized proton pump OS=Rhodopseudo... [more]
HPPA_BACTN1.911e-5446.00Pyrophosphate-energized proton pump OS=Bacteroides... [more]
HPPA_XANCP1.239e-5348.23Pyrophosphate-energized proton pump OS=Xanthomonas... [more]
AVP2_ARATH4.707e-5347.06Pyrophosphate-energized membrane proton pump 2 OS=... [more]
HPPA_XANAC6.147e-5347.79Pyrophosphate-energized proton pump OS=Xanthomonas... [more]

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Properties
Property NameValue
Genbank descriptionC31403C09EF CTVClemen1 Citrus clementina cDNA clone C31403C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875380 ID=FC875380; Name=FC875380; organism=Citrus clementina; type=EST; length=664bp
AACACCACTGCAGCTATCGGAAAGGGTTTCGCCATTGGTTCTGCAGCTCT
TGTGTCGCTAGCCCTCTTTGGTGCCTTTGTGAGCCGTGCAGCTATTTCAA
CTGTTGATGTGTTGACTCCAAAAGTGTTTATTGGTTTGATTGTTGGTGCT
ATGCTTCCTTACTGGTTCTCTGCCATGACAATGAAGAGTGTGGGAAGTGC
AGCTCTTAAAATGGTTGAGGAAGTGCGCAGGCAATTTAACACCATCTCTG
GTCTTATGGAAGGCACTGCCAAACCTGATTATGCTACCTGTGTTAAGATC
TCCACCGATGCATCCATCAAAGAGATGATCCCACCTGGTGCCCTTGTCAT
GCTTACACCCCTTATTGTTGGTATCTTTTTTGGTGTGGAAACTCTCTCTG
GGGTCCTTGCCGGTTCCCTTGTCTCAGGTGTACAGATTGCTATCTCTGCA
TCCAACACTGGTGGTGCCTGGGATAACGCCAAGAAGTACATTGAGGCTGG
CGCTTCAGAGCACGCCAGAACTCTTGGTCCAAAAGGATCAGATCCACACA
AGGCTGCGGTCATTGGTGACACAATTGGGGATCCATTGAAGGACACATCT
GGACCATCACTTAACATCCTAATCAAGCTAATGGCAGTGGAATCACTTGT
TTTTGCTCCCTTTT
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