FC875380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: AVPX_ARATH (Pyrophosphate-energized membrane proton pump 3 OS=Arabidopsis thaliana GN=AVPL2 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.788e-52 Identity = 112/238 (47.06%), Postives = 151/238 (63.45%), Query Frame = 1 Query: 1 NTTAAIGKGFAIGSAALVSLALFGAFV------SRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFF------------GVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 660 NTT A KGFAIGSAAL S LF A++ + + VD+ P+VFIG ++GAML + FSA +VG A ++V EVRRQF G+M+ KPDY CV I ++++EMI PGAL +++P+ VG F G + ++ +L + V G+ +A+ + GGAWDNAKKYIE GA LG KGSD HKAAV GDT+GDP KDT+GPS+++LIK++A +LV AP Sbjct: 568 NTTKATTKGFAIGSAALASFLLFSAYMDEVSAFANVSFKEVDIAIPEVFIGGLLGAMLIFLFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASSALREMIKPGALAIISPIAVGFVFRILGYYTGQPLLGAKVVAAMLMFATVCGILMALFLNTAGGAWDNAKKYIETGA------LGGKGSDSHKAAVTGDTVGDPFKDTAGPSIHVLIKMLATITLVMAP 799
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_MYXXA (Pyrophosphate-energized proton pump (Fragment) OS=Myxococcus xanthus GN=hppA PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.373e-51 Identity = 115/229 (50.22%), Postives = 151/229 (65.94%), Query Frame = 1 Query: 1 NTTAAIGKGFAIGSAALVSLALFGAF---VSRAAIS------TVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAG-ASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFA 657 NTTAAIGKGFAIGSA L +ALF AF V+ I+ ++ + P V +GL++G++LP+ A TM +VG AA +VEE+ RQF I GLME A PD V I+T ++++EM+ PG + + P +VG G L+G+LAGSLV G +A+ +N GGAWDNAKK+IE G HA KGS HKAAV+GD +GDP KDTSGP + ILIK+M+V SL+ A Sbjct: 46 NTTAAIGKGFAIGSATLTVIALFSAFNLEVNHTRIAAGLPEMSLQLTNPNVIVGLLLGSILPFLVGASTMLAVGRAAGAIVEEIGRQFREIPGLMELKADPDPKKIVDIATKSALQEMVFPGIIAVAAPPLVGYLLGPGALAGLLAGSLVVGATMALYMANAGGAWDNAKKFIEKGKLPGHA-----KGSAVHKAAVVGDMVGDPFKDTSGPGVAILIKVMSVVSLLVA 269
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_RHORT (Pyrophosphate-energized proton pump OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=hppA PE=1 SV=3) HSP 1 Score: 194.512 bits (493), Expect = 4.123e-49 Identity = 112/240 (46.67%), Postives = 151/240 (62.92%), Query Frame = 1 Query: 1 NTTAAIGKGFAIGSAALVSLALFGAFV-----------SRAAISTVDV----LTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIV-GIFFGV-------ETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLV 651 NTT A+ KG+AIGSA L +L LF A+ + A + VDV +P V +GL +G +LPY F +M M +VG AA +VEEVRRQF I G+MEGTAKP+Y CV + T A+IKEMI P L +L P+++ + G+ L +L G +V+G+ +AIS + GGAWDNAKKYIE G G KGS+ HKAAV GDT+GDP KDT+GP++N +IK+ + +L+ Sbjct: 462 NTTKAVTKGYAIGSAGLGALVLFAAYTEDLAFFKANVDAYPAFAGVDVNFSLSSPYVVVGLFIGGLLPYLFGSMGMTAVGRAAGSVVEEVRRQFREIPGIMEGTAKPEYGRCVDMLTKAAIKEMIIPSLLPVLAPIVLYFVILGIADKSAAFSALGAMLLGVIVTGLFVAISMTAGGGAWDNAKKYIEDG------HYGGKGSEAHKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVALL 695
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA1_RHOPA (Pyrophosphate-energized proton pump OS=Rhodopseudomonas palustris GN=hppA PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.123e-46 Identity = 111/245 (45.31%), Postives = 150/245 (61.22%), Query Frame = 1 Query: 1 NTTAAIGKGFAIGSAALVSLALFGA-------FVSRAAISTVDVL------TPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSG---------------VLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLV 651 NTT A+ KG+AIGSA L +L LF A F+++ + V V P V +GL+ G +LPY F AM M +VG AA +VEEVRRQF G+M+GT KPDY V + T A+IKEMI P L +L+P+ V +F + ++G +L G +V+G+ +AIS ++ GGAWDNAKKYIE G G KGSD HKAAV GDT+GDP KDT+GP++N +IK+ + +L+ Sbjct: 463 NTTKAVTKGYAIGSAGLGALVLFAAYNEDLKFFIAQKSPYFVGVAPDFSLNNPYVVVGLLFGGLLPYLFGAMGMTAVGRAAGAIVEEVRRQFREKPGIMKGTDKPDYGKAVDLLTKAAIKEMIIPSLLPVLSPIFV--YFAIYAIAGGGAAGKSAAFSAVGAMLLGVIVTGLFVAISMTSGGGAWDNAKKYIEDGHH------GGKGSDAHKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVALL 699
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_BRAJA (Pyrophosphate-energized proton pump OS=Bradyrhizobium japonicum GN=hppA PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.466e-46 Identity = 111/247 (44.94%), Postives = 151/247 (61.13%), Query Frame = 1 Query: 1 NTTAAIGKGFAIGSAALVSLALFGA-------FVSRAAISTV--------DVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSG---------------VLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLV 651 NTT A+ KG+AIGSA L +L LF A FV+ +A T + P V +GL+ G +LPY F AM M +VG AA +VEEVRRQF G+M+GT KPDY V + T A+IKEMI P L +L+P++V +F + ++G +L G +V+G+ +AIS ++ GGAWDNAKKYIE G G KGSD HK+AV GDT+GDP KDT+GP++N +IK+ + +L+ Sbjct: 461 NTTKAVTKGYAIGSAGLGALVLFAAYNQDLKFFVADSAHHTYFAGVNPDFSLNNPYVVVGLLFGGLLPYLFGAMGMTAVGRAASAIVEEVRRQFREKPGIMQGTDKPDYGKAVDLLTKAAIKEMIIPSLLPVLSPIVV--YFLIYAIAGGGATGKSAAFSAVGAMLLGVIVTGLFVAISMTSGGGAWDNAKKYIEDG------HYGGKGSDAHKSAVTGDTVGDPYKDTAGPAVNPMIKITNIVALL 699
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_CAUCR (Pyrophosphate-energized proton pump OS=Caulobacter crescentus GN=hppA PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.278e-46 Identity = 103/243 (42.39%), Postives = 146/243 (60.08%), Query Frame = 1 Query: 1 NTTAAIGKGFAIGSAALVSLALF----------------GAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSG----------VLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLV 651 NTT A+ KG+AIGSA L +L LF G+F T D+ P V +GL+ G +LP+ F ++M +VG AA +V EVRRQF G+M G KP+Y V I T A+I+EMI P L +++P V +FF ++ ++G +L G +V+G+ +AIS ++ GGAWDNAKK IE G ++ L KG + HKAAV GDT+GDP KDTSGP++N +IK+ + +L+ Sbjct: 463 NTTKAVTKGYAIGSAGLGALVLFAAYTEDLKFFSENAAPGSFFHGMGAVTFDLSNPYVVVGLLFGGLLPFLFGGLSMTAVGRAAESVVAEVRRQFRDNPGIMTGEVKPEYGKAVDILTKAAIREMIVPSLLPVVSP--VALFFVIQAIAGKVDAFAALGAMLMGVIVTGLFVAISMTSGGGAWDNAKKVIEEGFTDKNGVLHKKGGETHKAAVTGDTVGDPYKDTSGPAVNPMIKITNIVALL 703
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_PYRAE (Pyrophosphate-energized proton pump OS=Pyrobaculum aerophilum GN=hppA PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.505e-46 Identity = 101/236 (42.80%), Postives = 144/236 (61.02%), Query Frame = 1 Query: 1 NTTAAIGKGFAIGSAALVSLALFGAFVSRA------------------AISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVF 654 NTT A KG+AI SAAL +L LF A + ++S + ++ V IG +G L Y+FS+ T+++VG A+++VEE+RRQF G++E +PDYA V I+T ++ E + PG ++ PLI G+ G L+G++ G++V+GV A+ +N GGAWDNAKKYIE G K ++ HKAAVIGDT+GDP+KDT GPSLN LIK++ S+VF Sbjct: 473 NTTKATTKGYAIASAALAALVLFIALIFEIVYSASKILGKGIVDMISESLSGLQLINANVLIGAFLGVALVYFFSSRTLEAVGRTAMEIVEEIRRQFREKPGILEWKEQPDYARVVDIATRRALGEFLIPGLAAIVLPLITGLLLGWNALAGLIMGAIVAGVPRALLMANAGGAWDNAKKYIE--------IQGLKKTEMHKAAVIGDTVGDPMKDTVGPSLNPLIKVLNTLSVVF 700
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_RHIME (Pyrophosphate-energized proton pump OS=Rhizobium meliloti GN=hppA PE=3 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.373e-44 Identity = 105/244 (43.03%), Postives = 145/244 (59.43%), Query Frame = 1 Query: 1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAA--------------ISTV--DVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGV-----------LAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLV 651 NTT A+ KG+AIGSA L +L LF A+ + A + T+ D+ P V GLI G ++PY F + M +VG A +VEEVRRQF G+MEG +PDY V + T A+I+EMI P L +L P++V +FGV +SG L G +V+G+ +AIS ++ GGAWDNAKK E G + T KGS+ HKA+V GDT+GDP KDT+GP++N IK+ + +L+ Sbjct: 464 NTTKAVTKGYAIGSAGLGALVLFAAYSNDLAYFAANGDKHPYFADVGTISFDLSNPYVVAGLIFGGLIPYLFGGIAMTAVGRAGSAVVEEVRRQFKEKPGIMEGKDRPDYGRAVDMLTKAAIREMIIPSLLPVLAPIVV--YFGVLLISGSKASAFAALGASLLGVIVNGLFVAISMTSGGGAWDNAKKSFEDGFVDRNGTRHMKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALL 705
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_HELCL (Pyrophosphate-energized proton pump (Fragment) OS=Heliobacterium chlorum GN=hppA PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.341e-44 Identity = 93/172 (54.07%), Postives = 117/172 (68.02%), Query Frame = 1 Query: 1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAIS------------TVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNA 480 NTTAA+ KGFAIGSAAL +LALF AF S +++L PK+ IGL +G +P+ F A M++VG AA +M+ EVRRQF I GLMEG AKPDYA CV IST A+I++MI PG L ++TPLIVG FG + L G+LAG V+GV +AI +N GGAWD+A Sbjct: 26 NTTAAVAKGFAIGSAALTALALFTAFAEEVVKSPGVSSALHGSHFVLNLLEPKIIIGLFIGGTVPFLFCAFAMEAVGKAAFEMIGEVRRQFREIPGLMEGKAKPDYARCVDISTRAAIRQMIAPGLLAVITPLIVGFGFGAQALGGMLAGVTVAGVLLAIFMANAGGAWDHA 197
BLAST of FC875380 vs. ExPASy Swiss-Prot
Match: HPPA_RHILO (Pyrophosphate-energized proton pump OS=Rhizobium loti GN=hppA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.994e-44 Identity = 104/244 (42.62%), Postives = 144/244 (59.02%), Query Frame = 1 Query: 1 NTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTV----------------DVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTISGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSG-----------VLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLV 651 NTT A+ KG+AIGSA L +L LF A+ + D+ P V GLI G ++PY F + M +VG AA +VEEVR+QF G+M GT+KP+YA V + T A+I+EMI P L +L PL+V +FGV +SG L G +V+G+ +AIS ++ GGAWDNAKK E G ++ KGS+ HKA+V GDT+GDP KDT+GP++N IK+ + +L+ Sbjct: 464 NTTKAVTKGYAIGSAGLGALVLFAAYSNDLKFFAANGDKYPYFQGMGEISFDLSNPYVVAGLIFGGLIPYLFGGIAMTAVGRAAGAIVEEVRKQFREDPGIMAGTSKPNYARAVDLLTKAAIREMIIPSLLPVLAPLVV--YFGVLLISGSKASAFAALGASLLGVIVNGLFVAISMTSGGGAWDNAKKSFEDGFTDKDGVKHLKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALL 705 The following BLAST results are available for this feature:
BLAST of FC875380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875380 ID=FC875380; Name=FC875380; organism=Citrus clementina; type=EST; length=664bpback to top |