FC875382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.065e-40 Identity = 85/178 (47.75%), Postives = 104/178 (58.43%), Query Frame = 2 Query: 176 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPSHHATKSLPTNGTISND 709 +G II+R MFE +L +R D C FYTYDAFI+AA FP FG +GN+ R RE+AAFF QT HETTGGW AP G +AWGYC ++EI+P P YYGRGPIQLT YNY ++DPV++F++AIWFWMTAQ P + T S D Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDP----------PYYGRGPIQLTHKYNYQ--LAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGD 191
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.249e-39 Identity = 82/172 (47.67%), Postives = 102/172 (59.30%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH 667 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT HET GG G + GYCF+ +I + +YYGRGPIQLT NY R ATDP++SFK+AIWFWMT Q PS H Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIE-----------QSDRYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCH 177 HSP 2 Score: 24.6386 bits (52), Expect = 1.249e-39 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH VI +W Sbjct: 173 KPSCHNVIIGQW 184
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.249e-39 Identity = 82/172 (47.67%), Postives = 103/172 (59.88%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH 667 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT HET GG G + GYCF+ +I + +YYGRGPIQLT NY R ATDP++SF++AIWFWMTAQ PS H Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQID-----------QSDRYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCH 177 HSP 2 Score: 24.6386 bits (52), Expect = 1.249e-39 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH VI +W Sbjct: 173 KPSCHNVIIGQW 184
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.753e-38 Identity = 81/174 (46.55%), Postives = 101/174 (58.05%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS--PYC--NLNYPRRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 G+ G + I+SR +F+ +L +RND CPA FYTYDAF+ AA AFP F +G + RE+AAF AQT HETTGGW AP G YAWGYCF E + YC + +P KYYGRGPIQL++N+NY A+D +SF +A WFWMT Q P Sbjct: 75 GSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNY--GPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSP 246 HSP 2 Score: 24.6386 bits (52), Expect = 1.753e-38 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH V T +W Sbjct: 247 KPSCHAVATGQW 258
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.206e-37 Identity = 76/181 (41.99%), Postives = 107/181 (59.12%), Query Frame = 2 Query: 191 SREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCN----LNYPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPSHHATKSLPTNGTISNDVTPA 721 + MFE +LP RN+ CP +GFYTYDA+ A + +P FG +G++ R RE+AAFFAQT ET+G + WGYC ++E++P S YC+ +YP YYGRGP+QL WNYNY C ATDPVLSF++A+WFWM + H+T + + I+ + +P+ Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGEC--GNYLGQNLLDEPEKVATDPVLSFEAALWFWM-----NPHSTGAPSCHEVITGEWSPS 241
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.121e-37 Identity = 74/180 (41.11%), Postives = 102/180 (56.67%), Query Frame = 2 Query: 152 GHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN------YPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH 667 G+ + I+S +++ L +++D CPARGFYTY +F+ AA FP F +G R RE+AAF AQ HETTGGW AP G YAWG C+ EI+P S YC+ YP + Y+GRGPIQ++WN+NY +D ++F++A+WFWMT + PS H Sbjct: 41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGK-SYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSD--IAFQTALWFWMTPRDTKPSCH 217 HSP 2 Score: 24.2534 bits (51), Expect = 7.121e-37 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1 Query: 655 TKPSCHEVITDEW 693 TKPSCH+V+ E+ Sbjct: 212 TKPSCHQVMVGEY 224
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.212e-36 Identity = 81/172 (47.09%), Postives = 101/172 (58.72%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH 667 G+ ++G I++ ++F ++L RND RCPA+GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT HETTGG A G +A GYCF+ E +YGRGPIQLT NY ATD +SFK+AIWFWMTAQ PS H Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVRE----------GNQMGSGFYGRGPIQLTGQSNY--DLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCH 171 HSP 2 Score: 27.7202 bits (60), Expect = 1.212e-36 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH+VIT +W Sbjct: 167 KPSCHDVITGQW 178
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.703e-35 Identity = 86/191 (45.03%), Postives = 107/191 (56.02%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEI----SPPSPYCNLNYPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH 667 C + + +G G +G +I++ +F +LP R++ +CPARGFYTYDAFI AA +FPAFG SG + RE+AAFF QT HETTGG R + ++ WGYCF EI SPP YYGRGPIQLT NY +TD V+SFK+AIWFWMTAQ PS H Sbjct: 14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGS-SDQFQWGYCFKEEINKATSPP-------------YYGRGPIQLTGQSNYQAA--GNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCH 186 HSP 2 Score: 24.6386 bits (52), Expect = 1.703e-35 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH+VI W Sbjct: 182 KPSCHDVILGRW 193
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.905e-35 Identity = 81/172 (47.09%), Postives = 97/172 (56.40%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHH 667 GT +G I++ ++F+ +L RND RC A FYTYDAFI AA +FP FG +G++T R +EIAAFF QT HETTGG +P G YA GYCF+ E YYGRGPIQLT NY ATD +SFK+AIWFWMT Q PS H Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTL-SPDGPYAGGYCFLRE----------GNQMGNGYYGRGPIQLTGQSNY--DLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCH 178 HSP 2 Score: 26.9498 bits (58), Expect = 4.905e-35 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH+VIT W Sbjct: 174 KPSCHDVITGRW 185
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 2.388e-34 Identity = 77/180 (42.78%), Postives = 90/180 (50.00%), Query Frame = 2 Query: 119 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 G G G G G G L II MF+D+L YRND +CPA GFYTY+AFI AAK FP FGN+G++ MR REIAAF QT HET G W A G +Y WGYC + NYNY C TDP ++FK+A+WFWMT Q P Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM------------------------------NYNYGLCGDDLNLPLLQEPELVE--TDPFIAFKTALWFWMTPQSP 213 HSP 2 Score: 26.9498 bits (58), Expect = 2.388e-34 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH VIT+ W Sbjct: 214 KPSCHAVITESW 225 The following BLAST results are available for this feature:
BLAST of FC875382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875382 ID=FC875382; Name=FC875382; organism=Citrus clementina; type=EST; length=722bpback to top |