FC875385 | Citrus Genome Database

Overview


Name	FC875385
Unique Name	FC875385
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	729

Libraries


Library Name	Type
CTVClemen1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC875385 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.000e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 2.000e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 113.62 bits (283), Expect = 1.100e-24
Identity = 59/69 (85.51%), Postives = 62/69 (89.86%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG*QLEDGRTLADYT-SRRITLHL 729
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAG QLEDGRTL+DY   +  TLHL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69

[Close]

BLAST of FC875385 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.000e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 2.000e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 113.62 bits (283), Expect = 1.100e-24
Identity = 59/69 (85.51%), Postives = 62/69 (89.86%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG*QLEDGRTLADYT-SRRITLHL 729
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAG QLEDGRTL+DY   +  TLHL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69

[Close]

BLAST of FC875385 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.613e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.591 bits (366), Expect = 2.613e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 113.235 bits (282), Expect = 1.437e-24
Identity = 58/69 (84.06%), Postives = 63/69 (91.30%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG*QLEDGRTLADYT-SRRITLHL 729
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAG QLEDGRTL+DY   +  TLHL
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69

[Close]

BLAST of FC875385 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.412e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 2 Score: 145.206 bits (365), Expect = 3.412e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 3 Score: 113.62 bits (283), Expect = 1.100e-24
Identity = 59/69 (85.51%), Postives = 62/69 (89.86%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG*QLEDGRTLADYT-SRRITLHL 729
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAG QLEDGRTL+DY   +  TLHL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69

[Close]

BLAST of FC875385 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.456e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.821 bits (364), Expect = 4.456e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 112.464 bits (280), Expect = 2.451e-24
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG*QLEDGRTLADYT-SRRITLHL 729
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAG QLEDGRTL+DY   +  TLHL
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69

[Close]

BLAST of FC875385 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 112.079 bits (279), Expect = 3.201e-24
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG*QLEDGRTLADYT-SRRITLHL 729
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAG QLE+GRTLADY   +  TLHL
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHL 69

[Close]

BLAST of FC875385 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 112.079 bits (279), Expect = 3.201e-24
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG*QLEDGRTLADYT-SRRITLHL 729
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAG QLEDGRTL+DY   +  TLHL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69

[Close]

BLAST of FC875385 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 112.079 bits (279), Expect = 3.201e-24
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG*QLEDGRTLADYT-SRRITLHL 729
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAG QLEDGRTL+DY   +  TLHL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69

[Close]

BLAST of FC875385 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 112.079 bits (279), Expect = 3.201e-24
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG*QLEDGRTLADYT-SRRITLHL 729
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAG QLEDGRTL+DY   +  TLHL
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69

[Close]

BLAST of FC875385 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.693e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 1.693e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.538 bits (275), Expect = 9.314e-24
Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG*QLEDGRTLADYT-SRRITLHL 729
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAG QLEDGRTL+DY   +  TLHL
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69

The following BLAST results are available for this feature:

BLAST of FC875385 vs. ExPASy Swiss-Prot

BLAST of FC875385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_CAMDR	2.000e-34	96.05	Ubiquitin OS=Camelus dromedarius PE=3 SV=2	[more]
UBIQ_BOVIN	2.000e-34	96.05	Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1	[more]
UBIQ_TETPY	2.613e-34	94.74	Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ...	[more]
UBIQ_SHEEP	3.412e-34	94.74	Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2	[more]
UBIQ_EIMBO	4.456e-34	94.74	Ubiquitin OS=Eimeria bovis PE=2 SV=1	[more]
UBIQ_TRYBB	5.820e-34	94.74	Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1	[more]
UBIQ_STRPU	5.820e-34	94.74	Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV...	[more]
UBIQ_ENCCU	5.820e-34	94.74	Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074...	[more]
UBIQ_DICDI	5.820e-34	94.74	Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1...	[more]
UBIQ_PHYIN	1.693e-33	93.42	Ubiquitin OS=Phytophthora infestans PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	C31403D02EF CTVClemen1 Citrus clementina cDNA clone C31403D02, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC875385 ID=FC875385; Name=FC875385; organism=Citrus clementina; type=EST; length=729bp
GACCGTTTCTCAGATTATCTTCACCTTTAATTCGATAAAAGGCCTCCTTC
TGTTCTCTCTGTCAAGCAGATGCAAATCTTTGTGAAAACTCTCACCGGCA
AGACAATAACCCTTGAGGTTGAAAGCTCCGACACCATTGATAATGTAAAA
GCCAAGATCCAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGGCTTAT
CTTTGCTGGTAAACAGCTCGAGGATGGTCGCACACTCGCTGACTATAATA
TCCAGAAGGAATCAACCCTCCACTTGGTCCTTCGACTTAGGGGTGGTATG
CAGATCTTTGTAAAGACCCTCACTGGCAAGACGATTACTCTTGAGGTGGA
AAGCTCCGACACCATTGACAATGTGAAAGCCAAGATTCAAGACAAGGAAG
GGATCCCACCAGACCAACAGAGGCTTATCTTTGCTGGTAAACAGCTTGAG
GATGGTCGCACACTTGCTGATTATAACATCCAGAAGGAGTCAACCCTCCA
CTTGGTCCTCCGTCTCCGTGGTGGTATGCAGATCTTTGTAAAGACCCTCA
CTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCCGACACCATTGACAAT
GTCAAAGCCAAAATTCAGGATAAGGAAGGGATCCCACCAGACCAGCAAAG
GCTCATCTTTGCCGGGTAACAACTAGAGGATGGACGCACACTTGCAGACT
ACACATCCAGAAGAATCACCCTTCATTTG