FC875386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: CLIC4_RAT (Chloride intracellular channel protein 4 OS=Rattus norvegicus GN=Clic4 PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16 Identity = 59/226 (26.11%), Postives = 107/226 (47.35%), Query Frame = 1 Query: 64 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIVEEKYPEPSL----TNPPEFASLGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKT-KAEKQYVIA 672 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+ + D + I +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K+ F+ G+++T D +L PKL+ ++V + ++ + +P+ + + Y+ ++ + F T ++K+ IA Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPAHLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPGEIDENSMEDIKSSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIA 243
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: CLIC4_PONAB (Chloride intracellular channel protein 4 OS=Pongo abelii GN=CLIC4 PE=2 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15 Identity = 59/226 (26.11%), Postives = 106/226 (46.90%), Query Frame = 1 Query: 64 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIVEEKYPEPSL----TNPPEFASLGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKT-KAEKQYVIA 672 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+ + D + I +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K F+ G+++T D +L PKL+ ++V + ++ + +P+ + + Y+ ++ + F T ++K+ IA Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVSTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIA 243
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: CLIC4_MOUSE (Chloride intracellular channel protein 4 OS=Mus musculus GN=Clic4 PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15 Identity = 59/226 (26.11%), Postives = 106/226 (46.90%), Query Frame = 1 Query: 64 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIVEEKYPEPSL----TNPPEFASLGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKT-KAEKQYVIA 672 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+ + D + I +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K F+ G+++T D +L PKL+ ++V + ++ + +P+ + + Y+ ++ + F T ++K+ IA Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIA 243
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: CLIC4_BOVIN (Chloride intracellular channel protein 4 OS=Bos taurus GN=CLIC4 PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15 Identity = 59/226 (26.11%), Postives = 106/226 (46.90%), Query Frame = 1 Query: 64 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIVEEKYPEPSL----TNPPEFASLGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKT-KAEKQYVIA 672 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+++ D + I +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K F+ G ++T D +L PKL+ ++V + ++ + +P+ + + Y+ ++ + F T ++K+ IA Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNNEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIA 243
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: CLIC4_HUMAN (Chloride intracellular channel protein 4 OS=Homo sapiens GN=CLIC4 PE=1 SV=4) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 59/226 (26.11%), Postives = 105/226 (46.46%), Query Frame = 1 Query: 64 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIVEEKYPEPSL----TNPPEFASLGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKT-KAEKQYVIA 672 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+ + D + I +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K F+ G ++T D +L PKL+ ++V + ++ + +P+ + + Y+ ++ + F T ++K+ IA Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIA 243
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: CLIC3_HUMAN (Chloride intracellular channel protein 3 OS=Homo sapiens GN=CLIC3 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15 Identity = 62/240 (25.83%), Postives = 104/240 (43.33%), Query Frame = 1 Query: 52 AKMAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIVEEKYPEPSLTNPPEFASL----------GSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHLKTH------GGP--------FIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKTKAEKQYVIAGWAPKGH 693 A+ +++ VKA+ + G CP QR + L K VP+ ++ P + +P ++P++ +D D+ I +EE PP+F SL G+ +F F F+K+ P ++ Q LL L LD +L+ G P F+ G+++T D SL PKL+ + HF+Q +P L V Y+ + F+ T ++A + P H Sbjct: 2 AETKLQLFVKASEDGESV-GHCPSCQRLFMVLLLKGVPFTLTTVDTRRSPDVLKDFAPGSQLPILLYDSDAKTDTLQIEDFLEETL------GPPDFPSLAPRYRESNTAGNDVFHKFSAFIKNPVPAQDEALYQQLLRALARLDSYLRAPLEHELAGEPQLRESRRRFLDGDRLTLADCSLLPKLHIVDTVCAHFRQAPIPAELRGVRRYLDSAMQEKEFKYTCPHSAEILAAYRPAVH 234
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: CLIC2_HUMAN (Chloride intracellular channel protein 2 OS=Homo sapiens GN=CLIC2 PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15 Identity = 59/224 (26.34%), Postives = 106/224 (47.32%), Query Frame = 1 Query: 64 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIVEE-----KYPEPSLTNPPEFASLGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHLKT----------------HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKTKAEKQYV 666 +E+ VKA I G+CPF QR + L K V + ++++ KP+ +++P P + ++ + D I +E+ +YP S F +G +F F ++K+ K+ N E++LL+E K LD++L T F+ G+++T D SL PKL ++VA + ++ + +P + V Y+ +A E F T E + + Sbjct: 14 IELFVKAGSDGESI-GNCPFCQRLFMILWLKGVKFNVTTVDMTRKPEELKDLAPGTNPPFLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSPKYKESF-DVGCNLFAKFSAYIKNTQKEANKNFEKSLLKEFKRLDDYLNTPLLDEIDPDSAEEPPVSRRLFLDGDQLTLADCSLLPKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHTCPEDKEI 235
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: CLIC5_RAT (Chloride intracellular channel protein 5 OS=Rattus norvegicus GN=Clic5 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14 Identity = 59/229 (25.76%), Postives = 108/229 (47.16%), Query Frame = 1 Query: 64 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIVEE-----KYPEPSLTNPPEFASLGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHLKT----------HGGP------FIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKTKAEKQYVIAGWA 681 +E+ VKA + I G+CPFSQR + L K V + +++ KP ++P P + F+ D + I +EE KYP+ + + E + G IF F ++K+ + N E+ L + L+ LD++L T HG F+ G+++T D +L PKL+ +++ + ++ + +P + + Y+K +A + F T A + +A Sbjct: 16 IELFVKAGIDGESI-GNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAARHR-ESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALRKLDDYLNTPLPEEIDTNTHGDEKGSQRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYA 242
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: CLIC5_MOUSE (Chloride intracellular channel protein 5 OS=Mus musculus GN=Clic5 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14 Identity = 59/229 (25.76%), Postives = 108/229 (47.16%), Query Frame = 1 Query: 64 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIVEE-----KYPEPSLTNPPEFASLGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHLK----------THGGP------FIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKTKAEKQYVIAGWA 681 +E+ VKA + I G+CPFSQR + L K V + +++ KP ++P P + F+ D + I +EE KYP+ + + E + G IF F ++K+ + N E+ L + L+ LD++L THG F+ G+++T D +L PKL+ +++ + ++ + +P + + Y+K +A + F T A + +A Sbjct: 16 IELFVKAGIDGESI-GNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHR-ESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALRKLDDYLNSPLPEEIDTNTHGDEKGSQRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYA 242
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: CLIC2_RAT (Chloride intracellular channel protein 2 OS=Rattus norvegicus GN=Clic2 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14 Identity = 60/224 (26.79%), Postives = 104/224 (46.43%), Query Frame = 1 Query: 64 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIVEE-----KYPEPSLTNPPEFASLGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHLKT----------------HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKTKAEKQYV 666 +E+ VKA I G+CPF QR + L K V + I+ + KP+ +++P P + ++ + D I +E+ +YP S F +G +F F ++K+ K+ N E++LL E K LD++L T F+ G+++T D SL PKL ++VA + ++ + +P + V Y+ +A E F T E + + Sbjct: 14 IELFVKAGSDGESI-GNCPFCQRLFMILWLKGVKFNVTTIDTARKPEELKDLAPGTNPPFLIYNKELKTDFIKIEEFLEKTLAPPRYPHLSPKYKESF-DVGCNLFAKFSAYIKNTQKEANKNFEKSLLREFKRLDDYLNTPLLDEIDPDSTEERTLSRRLFLDGDQLTLADCSLLPKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFAHTCPEDKEI 235 The following BLAST results are available for this feature:
BLAST of FC875386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875386 ID=FC875386; Name=FC875386; organism=Citrus clementina; type=EST; length=715bpback to top |