FC875386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: CLIC5_HUMAN (Chloride intracellular channel protein 5 OS=Homo sapiens GN=CLIC5 PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13 Identity = 57/229 (24.89%), Postives = 105/229 (45.85%), Query Frame = 1 Query: 64 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIVEE-----KYPEPSLTNPPEFASLGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHLKT----------------HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKTKAEKQYVIAGWA 681 + + VKA + I G+CPFSQR + L K V + +++ KP ++P P + F+ D + I +EE KYP+ + + E + G IF F ++K+ + N E+ L + LK LD++L T F+ G+++T D +L PKL+ +++ + ++ + +P + + Y+K +A + F T A + +A Sbjct: 175 IYLFVKAGIDGESI-GNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHR-ESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYA 401
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: CLIC3_MOUSE (Chloride intracellular channel protein 3 OS=Mus musculus GN=Clic3 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13 Identity = 60/236 (25.42%), Postives = 99/236 (41.95%), Query Frame = 1 Query: 64 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIVEEKYPEPSLTNPPEFASL----------GSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDE--------------HLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKTKAEKQYVIAGWAPKGH 693 +++ VKA+ + G CP QR + L K VP+ ++ + +P ++P++ +D D+ I +EE PP+F SL G+ IF F F+K+ P ++ Q LL L LD HL+ F+ G++ T D SL PKL+ + HF+Q +P L+ V Y+ + F+ T ++A + P H Sbjct: 7 LQLFVKASEDGESV-GHCPSCQRLFMVLLLKGVPFTLTTVDTRRALDVLKDFAPGSQLPILLYDGDVKTDTLQIEEFLEETL------GPPDFPSLAPRYRESNTAGNDIFHKFSAFIKNPVPTQDNALYQQLLRALTRLDSYLRAPLDHELAQEPHLRESHRRFLDGDQFTLADCSLLPKLHIVDTVCAHFRQLPIPAELSCVRRYLDSALQKKEFKYTCPHSAEILAAYQPAVH 235
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: CLIC5_BOVIN (Chloride intracellular channel protein 5 OS=Bos taurus GN=CLIC5 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.444e-13 Identity = 58/234 (24.79%), Postives = 104/234 (44.44%), Query Frame = 1 Query: 52 AKMAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIVEE-----KYPEPSLTNPPEFASLGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHLKT-----------------HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKTKAEKQYVIAGWA 681 A + + VKA + I G+CPFSQR + L K V + +++ KP ++P P + F+ D + I +EE KYP + + E + G IF F ++K+ + N E+ L + LK LD++L T F+ G+++T D +L PKL+ +++ + ++ + P + + Y+K +A + F T A + +A Sbjct: 197 ASPEINLFVKAGIDGESI-GNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPRLAAKHR-ESNTAGIDIFVKFSAYIKNTKQQSNAALERGLTKALKKLDDYLNTPLPEEIDADTRGDDEKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDFPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYA 428
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11 Identity = 53/171 (30.99%), Postives = 83/171 (48.54%), Query Frame = 1 Query: 115 CPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVK-FDDKWVADSDVIVRIVEEKYPEPSLTNPPEFASLG--------SKIFPSFVNFLKSKDPND--GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAH 594 CPF+QR L+ L+ K + ++ IN+ +KP+WF E +P G VPV++ V +S + ++E YPE L + SK+ P +F++SK D +AL E K L+E + + F+ G+ + VD P L+ ALE + E LAH Sbjct: 32 CPFAQRTLMVLKAKGIRHEVININLKNKPEWFFEKNPLGLVPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLESFSKVPPLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKS-FLGGDSPSMVDYLTWPWFQRLE-ALE------LKECLAH 194
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 48/158 (30.38%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 115 CPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVK-FDDKWVADSDVIVRIVEEKYPEPSL--TNPPEFA------SLGSKIFPSFVNFLKSKDPND--GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALE 555 CPF+QR L+ L+ K + ++ IN+ +KP+WF E +P G VPV++ + +S + ++E YPE L +P E A L SK+ +F+++K D G ++ L +E L+E + F G ++ +D + P L+ ALE Sbjct: 32 CPFAQRTLMVLKAKGIRHEIININLKNKPEWFFEKNPFGLVPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKMTFELFSKVPSLVTSFIRAKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYLIWPWFQRLE-ALE 188
BLAST of FC875386 vs. ExPASy Swiss-Prot
Match: GSTO1_PIG (Glutathione S-transferase omega-1 OS=Sus scrofa GN=GSTO1 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11 Identity = 47/158 (29.75%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 115 CPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVK-FDDKWVADSDVIVRIVEEKYPEPSL--TNPPEFA------SLGSKIFPSFVNFLKSKDPND--GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALE 555 CPF+QR LL L K + ++ IN+ +KP+WF + +P G VPV++ + + +S + ++E YP L +P E A L SK+ P + F++ ++ D G ++ L +E L+E L + G ++ +D + P L+ ALE Sbjct: 32 CPFAQRTLLVLNAKGIRHQVININLKNKPEWFFQKNPSGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMVFELSSKVPPLLIRFIRRENEADCSGLKEELRKEFSKLEEVLTKKKTTYFGGSSLSMIDYLIWPWFERLE-ALE 188 The following BLAST results are available for this feature:
BLAST of FC875386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875386 ID=FC875386; Name=FC875386; organism=Citrus clementina; type=EST; length=715bpback to top |