FC875389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875389 vs. ExPASy Swiss-Prot
Match: HSF2_MOUSE (Heat shock factor protein 2 OS=Mus musculus GN=Hsf2 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17 Identity = 59/193 (30.57%), Postives = 99/193 (51.30%), Query Frame = 1 Query: 97 FLIKTYDMVDDSSTDEIVSWSDNKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRK--------IDPEK---WEFSNDDFVKDKRHLLKNIHRRKPIHSHSHPQTQGSSVDPERATFEEQMERLSHEKSALEANIVRLKQQRSTAKLQLEDLAQRIDSMDQRQENLLTFLQKAVQNPTFVDHLARK 642 FL K + +V+++ T+E ++WS N SF+V + FA+ +LP YFKHNN +SF+RQLN YGFRK I E+ EF + F + + LL+NI R+ S S P+ + + +++ ++ +E+ + LK + + ++ +L + Q ++ F+ VQN V L RK Sbjct: 10 FLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHIESGIIKQERDGPVEFQHPYFKQGQDDLLENIKRKV---SSSKPE-ENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIVTLVQNNQLVS-LKRK 197
BLAST of FC875389 vs. ExPASy Swiss-Prot
Match: HSF2_HUMAN (Heat shock factor protein 2 OS=Homo sapiens GN=HSF2 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.575e-17 Identity = 57/193 (29.53%), Postives = 97/193 (50.26%), Query Frame = 1 Query: 97 FLIKTYDMVDDSSTDEIVSWSDNKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKI-----------DPEKWEFSNDDFVKDKRHLLKNIHRRKPIHSHSHPQTQGSSVDPERATFEEQMERLSHEKSALEANIVRLKQQRSTAKLQLEDLAQRIDSMDQRQENLLTFLQKAVQNPTFVDHLARK 642 FL K + +V+++ T+E ++WS N SF+V + FA+ +LP YFKHNN +SF+RQLN YGFRK+ EF + F + + LL+NI R+ S S P+ + + +++ ++ +E+ + LK + + ++ +L + Q ++ F+ VQN V L RK Sbjct: 10 FLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKV---SSSKPE-ENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIVTLVQNNQLVS-LKRK 197
BLAST of FC875389 vs. ExPASy Swiss-Prot
Match: HSF3_CHICK (Heat shock factor protein 3 OS=Gallus gallus GN=HSF3 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.493e-17 Identity = 55/178 (30.90%), Postives = 91/178 (51.12%), Query Frame = 1 Query: 97 FLIKTYDMVDDSSTDEIVSWSDNKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRK--------IDPEK---WEFSNDDFVKDKRHLLKNIHRRKPIHSHSHPQTQGSSVDPERA-TFEEQMERLSHEKSALEANIVRLKQQRSTAKLQLEDLAQRIDSMDQRQENLLTFL 594 FL K + +V+D +D+++ WS N +F + + FA+ LLP YFKHNN SSFIRQLN YGFRK I EK EF + F + HLL+NI R+ S +T+ V E +++ + +++ ++ + +K++ ++ L Q+ + +L F+ Sbjct: 19 FLAKLWALVEDPQSDDVICWSRNGENFCILDEQRFAKELLPKYFKHNNISSFIRQLNMYGFRKVVALENGMITAEKNSVIEFQHPFFKQGNAHLLENIKRKV-----SAVRTEDLKVCAEDLHKVLSEVQEMREQQNNMDIRLANMKRENKALWKEVAVLRQKHSQQQKLLSKILQFI 191
BLAST of FC875389 vs. ExPASy Swiss-Prot
Match: HSF2_CHICK (Heat shock factor protein 2 OS=Gallus gallus GN=HSF2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.719e-16 Identity = 55/193 (28.50%), Postives = 100/193 (51.81%), Query Frame = 1 Query: 97 FLIKTYDMVDDSSTDEIVSWSDNKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKI-----------DPEKWEFSNDDFVKDKRHLLKNIHRRKPIHSHSHPQTQGSSVDPERATFEEQMERLSHEKSALEANIVRLKQQRSTAKLQLEDLAQRIDSMDQRQENLLTFLQKAVQNPTFVDHLARK 642 FL K + +V ++ ++++++WS N SF+V + FA+ +LP YFKHNN +SF+RQLN YGFRK+ EF + F + + LL++I R+ S S P+ S + + + +++ ++ +E+ + LK++ + ++ +L + Q ++ F+ VQN V L RK Sbjct: 24 FLSKLWALVGEAPSNQLITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHVDSGIVKLERDGLVEFQHPYFKQGREDLLEHIKRKV---SSSRPEENKISQE-DLSKIISSAQKVEIKQETIESRLSALKRENESLWREVAELRAKHLKQQQVIRKIVQFIVTLVQNNQLVS-LKRK 211
BLAST of FC875389 vs. ExPASy Swiss-Prot
Match: HSF4_MOUSE (Heat shock factor protein 4 OS=Mus musculus GN=Hsf4 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.284e-16 Identity = 50/160 (31.25%), Postives = 81/160 (50.62%), Query Frame = 1 Query: 97 FLIKTYDMVDDSSTDEIVSWSDNKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKI-----------DPEKWEFSNDDFVKDKRHLLKNIHRRKPI----HSHSHPQTQGSSVDPERA------TFEEQMERLSHEKSALEANIVRLKQQRS 513 FL K + +V D TD ++ WS + SF+V + FA+ +LP YFKH+N +SF+RQLN YGFRK+ + + EF + FV+ + LL+ + R+ P S P+ + +A + E +++ L + L +V L+Q S Sbjct: 20 FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRKVPALRGDDSRWRPEDLSRLLGEVQALRGVQESTEARLQELRQQNEILWREVVTLRQSHS 179
BLAST of FC875389 vs. ExPASy Swiss-Prot
Match: HSF4_HUMAN (Heat shock factor protein 4 OS=Homo sapiens GN=HSF4 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.410e-15 Identity = 49/157 (31.21%), Postives = 79/157 (50.32%), Query Frame = 1 Query: 97 FLIKTYDMVDDSSTDEIVSWSDNKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKI-----------DPEKWEFSNDDFVKDKRHLLKNIHRRKPI----HSHSHPQTQGSSVDPERA------TFEEQMERLSHEKSALEANIVRLKQ 504 FL K + +V D TD ++ WS + SF+V + FA+ +LP YFKH+N +SF+RQLN YGFRK+ + + EF + FV+ + LL+ + R+ P P+ G + +A + E ++ L + L +V L+Q Sbjct: 21 FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRKVPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQ 177
BLAST of FC875389 vs. ExPASy Swiss-Prot
Match: HSF4_CANFA (Heat shock factor protein 4 OS=Canis familiaris GN=HSF4 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 97 FLIKTYDMVDDSSTDEIVSWSDNKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKI-----------DPEKWEFSNDDFVKDKRHLLKNIHRRKP 372 FL K + +V D TD ++ WS + SF+V + FA+ +LP YFKH+N +SF+RQLN YGFRK+ + + EF + FV+ + LL+ + R+ P Sbjct: 20 FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRKVP 122
BLAST of FC875389 vs. ExPASy Swiss-Prot
Match: SKN7_YEAST (Transcription factor SKN7 OS=Saccharomyces cerevisiae GN=SKN7 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12 Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 97 FLIKTYDMVDDSSTDEIVSWSDNKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKI--DPEK----------WEFSNDDFVKDKRHLLKNIHRRKP 372 F+ K + +++++ +IV+W++N SFVV + +F +LP +FKH+NF+SF+RQLN Y F K+ PE+ WEF + +F L NI R+ P Sbjct: 87 FVRKLFRILENNEYPDIVTWTENGKSFVVLDTGKFTTHILPNHFKHSNFASFVRQLNKYDFHKVKRSPEERQRCKYGEQSWEFQHPEFRVHYGKGLDNIKRKIP 190 The following BLAST results are available for this feature:
BLAST of FC875389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875389 ID=FC875389; Name=FC875389; organism=Citrus clementina; type=EST; length=682bpback to top |