FC875390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GT1_PONPY (Beta-1,3-galactosyltransferase 1 OS=Pongo pygmaeus GN=B3GALT1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.596e-16 Identity = 54/180 (30.00%), Postives = 90/180 (50.00%), Query Frame = 3 Query: 138 EALRSYPLSLHKPVDLFIGVFSTANN-FKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTL-AICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLY--GLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYV 665 E L + P K + + + ST + F R A+R TW + +A F +G + + ++N + E++ + DI + F+D Y+ +T KTL + T AK+VMKTD D FV +D ++ L + + Y G + P R+ SKWY+ + +P+ YPP+ G GY+ Sbjct: 64 EFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYV-INGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYI 242
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GT1_PANTR (Beta-1,3-galactosyltransferase 1 OS=Pan troglodytes GN=B3GALT1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.596e-16 Identity = 54/180 (30.00%), Postives = 90/180 (50.00%), Query Frame = 3 Query: 138 EALRSYPLSLHKPVDLFIGVFSTANN-FKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTL-AICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLY--GLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYV 665 E L + P K + + + ST + F R A+R TW + +A F +G + + ++N + E++ + DI + F+D Y+ +T KTL + T AK+VMKTD D FV +D ++ L + + Y G + P R+ SKWY+ + +P+ YPP+ G GY+ Sbjct: 64 EFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYV-INGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYI 242
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GT1_PANPA (Beta-1,3-galactosyltransferase 1 OS=Pan paniscus GN=B3GALT1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.596e-16 Identity = 54/180 (30.00%), Postives = 90/180 (50.00%), Query Frame = 3 Query: 138 EALRSYPLSLHKPVDLFIGVFSTANN-FKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTL-AICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLY--GLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYV 665 E L + P K + + + ST + F R A+R TW + +A F +G + + ++N + E++ + DI + F+D Y+ +T KTL + T AK+VMKTD D FV +D ++ L + + Y G + P R+ SKWY+ + +P+ YPP+ G GY+ Sbjct: 64 EFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYV-INGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYI 242
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GT1_MOUSE (Beta-1,3-galactosyltransferase 1 OS=Mus musculus GN=B3galt1 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.596e-16 Identity = 54/180 (30.00%), Postives = 90/180 (50.00%), Query Frame = 3 Query: 138 EALRSYPLSLHKPVDLFIGVFSTANN-FKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTL-AICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLY--GLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYV 665 E L + P K + + + ST + F R A+R TW + +A F +G + + ++N + E++ + DI + F+D Y+ +T KTL + T AK+VMKTD D FV +D ++ L + + Y G + P R+ SKWY+ + +P+ YPP+ G GY+ Sbjct: 64 EFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYV-INGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYI 242
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GT1_HUMAN (Beta-1,3-galactosyltransferase 1 OS=Homo sapiens GN=B3GALT1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.596e-16 Identity = 54/180 (30.00%), Postives = 90/180 (50.00%), Query Frame = 3 Query: 138 EALRSYPLSLHKPVDLFIGVFSTANN-FKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTL-AICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLY--GLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYV 665 E L + P K + + + ST + F R A+R TW + +A F +G + + ++N + E++ + DI + F+D Y+ +T KTL + T AK+VMKTD D FV +D ++ L + + Y G + P R+ SKWY+ + +P+ YPP+ G GY+ Sbjct: 64 EFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYV-INGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYI 242
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GT1_GORGO (Beta-1,3-galactosyltransferase 1 OS=Gorilla gorilla gorilla GN=B3GALT1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.596e-16 Identity = 54/180 (30.00%), Postives = 90/180 (50.00%), Query Frame = 3 Query: 138 EALRSYPLSLHKPVDLFIGVFSTANN-FKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTL-AICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLY--GLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYV 665 E L + P K + + + ST + F R A+R TW + +A F +G + + ++N + E++ + DI + F+D Y+ +T KTL + T AK+VMKTD D FV +D ++ L + + Y G + P R+ SKWY+ + +P+ YPP+ G GY+ Sbjct: 64 EFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYV-INGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYI 242
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3G5B_DANRE (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5B OS=Danio rerio GN=b3gnt5b PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.706e-15 Identity = 58/177 (32.77%), Postives = 92/177 (51.98%), Query Frame = 3 Query: 168 HKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSG---TVAVRFFVGLHKNQIVNGELWN----EARTYGDIQLMPFVDYYNLITWKTLAICIFG-TDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHS--GLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 +K + L + V S++ NF+RR A+R TW T + S TV V F +GLH G+L E + Y D+ F+D ++ +T K L + T A+F+M DDD FV ++ L+ + L G ++ S P+R+ ESK+Y+S + +P +YP + G GYV+ Sbjct: 84 NKDILLLLFVKSSSENFERRQAIRSTWGNETYIESTLGVTVKVLFALGLHPIPEERGKLKEDLMFEDQKYRDLIQQDFIDTFHNLTLKLLLQLGWKETYCHHAQFLMSADDDVFVHTPNLILYLQGFGQSNTRDLWIGGVHRGSPPNRDKESKYYVSRDLYPWLSYPDYTPGSGYVL 260
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3G5B_XENLA (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5B OS=Xenopus laevis GN=b3gnt5-B PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.677e-14 Identity = 55/179 (30.73%), Postives = 92/179 (51.40%), Query Frame = 3 Query: 165 LHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRS---GTVAVRFFVGLHKNQI----VNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFG---TDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLY-GLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 L++ V L + V + N +RR A+R+TW +RS + V F +G+ ++ + +L NE + + D+ F D ++ +T K L FG + SAKF+M DDD FV ++T LK + + + + G ++ S P R+ SK+Y+ E +P +YP + G YVV Sbjct: 83 LNEDVLLLLFVKTAPENRRRRNAIRKTWGNEDYIRSRYAANIKVVFALGVERDPVKSHHTQQDLVNENKRFKDLIQQDFSDTFHNLTLKLLLQ--FGWVNSFCPSAKFIMSADDDIFVHTPNLVTYLKSLPIETQDFWIGRVHRGSPPIRSKASKYYVPYEMYPWSSYPDYTAGAAYVV 259
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GT5_MOUSE (Beta-1,3-galactosyltransferase 5 OS=Mus musculus GN=B3galt5 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.265e-13 Identity = 54/170 (31.76%), Postives = 77/170 (45.29%), Query Frame = 3 Query: 171 KPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVV-----SAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYV 665 KP L + V S+ RMA+R+TW + T V+ V F +G + E+ + DI F D Y +T KT+ G + V +VMKTD D FV V + L + N + G I P R +KW++S E+P + YPP+ G GYV Sbjct: 53 KPPFLVLLVTSSHKQLAARMAIRKTWGRETSVQGQQVRTFFLLGTSDSTEEMDATTLESEQHRDIIQKDFKDAYFNLTLKTM----MGMEWVYHFCPQTAYVMKTDSDMFVNVGYLTELLLKKNKTTRFFTGYIKPHDFPIRQKFNKWFVSKFEYPWDRYPPFCSGTGYV 218
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GN3_MOUSE (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 OS=Mus musculus GN=B3gnt3 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.265e-13 Identity = 57/188 (30.32%), Postives = 89/188 (47.34%), Query Frame = 3 Query: 123 HTTDLEALRSYPLS-LHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKN----QIVNGELWNEARTYGDIQLMPFVD-YYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 H D LR ++ +PV L + + S+ N+ RR +R TW + VR + F VG ++ + N L EA+ YGDI F D ++NL + L + T +A FV+ DDD F D ++T L+ + L G + P R P SK++I E+ YPP+ G G+++ Sbjct: 88 HCRDFPVLREPRVTKCAEPVFLLLAIKSSPANYGRRQMLRTTWARERRVRGAPLRRLFLVGSDRDPQQARKYNRLLELEAQKYGDILQWDFHDSFFNLTLKQVLFLEWQLTYCTNASFVLNGDDDVFAHTDNMVTYLQDHDPDQHLFVGHLIQNVGPIRVPWSKYFIPALVMAEDRYPPYCGGGGFLL 275 The following BLAST results are available for this feature:
BLAST of FC875390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875390 ID=FC875390; Name=FC875390; organism=Citrus clementina; type=EST; length=668bpback to top |