FC875390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GN3_HUMAN (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 OS=Homo sapiens GN=B3GNT3 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.265e-13 Identity = 55/176 (31.25%), Postives = 87/176 (49.43%), Query Frame = 3 Query: 156 PLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGL----HKNQIVNGELWNEARTYGDIQLMPFVD-YYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 P +PV L + + S+ +N+ RR +RRTW + +VR + + F VG H+ + VN L EA+T+GDI F D ++NL + L + T +A FV+ DDD F D ++ L+ + L G + P R SK+Y+ E YPP+ G G+++ Sbjct: 100 PSKCAQPVFLLLVIKSSPSNYVRRELLRRTWGRERKVRGLQLRLLFLVGTASNPHEARKVNRLLELEAQTHGDILQWDFHDSFFNLTLKQVLFLQWQETRCANASFVLNGDDDVFAHTDNMVFYLQDHDPGRHLFVGQLIQNVGPIRAFWSKYYVPEVVTQNERYPPYCGGGGFLL 275
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GN9_BOVIN (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 OS=Bos taurus GN=B3GNT9 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13 Identity = 63/200 (31.50%), Postives = 92/200 (46.00%), Query Frame = 3 Query: 147 RSYPLSLHKP------------VDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQ-IVNGEL-------WN-----EARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVV-SAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 R +PL +++P DL I V S A +F+RR AVR+TW V+ V F +G+ + V GE W+ E+R Y DI L F D + +T K + + +D +FV K D D FV V +L L + LL G + ++RP R SK+YI + YP +A G G+V+ Sbjct: 94 RRFPLLINQPHKCQGNGAFPRGPDLLIAVKSVAADFERRQAVRQTWGAEGRVQGALVRRVFLLGVPRGTGTVAGEAEAGTQTHWSALLRAESRAYADILLWAFDDTFFNLTLKEIHFLAWASDYCPDVRFVFKGDADVFVHVGNLLEFLAPRDPAQDLLAGDVIVQARPIRVRASKYYIPEAVYGLPAYPAYAGGGGFVL 293
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GL1_PONAB (UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 OS=Pongo abelii GN=B3GALNT1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13 Identity = 53/179 (29.61%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 144 LRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLH---KNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVV-SAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 LR + H+ L I V S ++ K R A+R TW + V F +G +++++ L +E YGDI F+D YN +T KT+ + T+ +AK+VMKTD D F+ ++ L +N G ++ +R K +IS +E+P + +PP+ G GY++ Sbjct: 67 LREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFLLGQEAEKEDKMLALSLEDEHLLYGDIIRQDFLDTYNNLTLKTIMAFRWVTEFCPNAKYVMKTDTDVFINTGNLVKYLLNLNHSEKFFTGYPLIDNYSYRGFYQKTHISYQEYPFKVFPPYCSGLGYIM 245
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GL1_HUMAN (UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 OS=Homo sapiens GN=B3GALNT1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13 Identity = 53/179 (29.61%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 144 LRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLH---KNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVV-SAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 LR + H+ L I V S ++ K R A+R TW + V F +G +++++ L +E YGDI F+D YN +T KT+ + T+ +AK+VMKTD D F+ ++ L +N G ++ +R K +IS +E+P + +PP+ G GY++ Sbjct: 67 LREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFLLGQEAEKEDKMLALSLEDEHLLYGDIIRQDFLDTYNNLTLKTIMAFRWVTEFCPNAKYVMKTDTDVFINTGNLVKYLLNLNHSEKFFTGYPLIDNYSYRGFYQKTHISYQEYPFKVFPPYCSGLGYIM 245
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GT4_MOUSE (Beta-1,3-galactosyltransferase 4 OS=Mus musculus GN=B3galt4 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13 Identity = 60/198 (30.30%), Postives = 94/198 (47.47%), Query Frame = 3 Query: 174 PVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVS-----AKFVMKTDDDAFVRVDEVLTSL------------------KRINVHS-------GLLY-GLINSESRPHRNPESKWYISLEEWPEE--TYPPWAHGPGYVV 668 P L I V + + +R A+R +W E R V F +G + Q + +L +E+ + DI F D Y +T KTL+ G + V+ A++++KTDDD +V V E+++ L + +H LLY G ++ RP R PES+ ++S E WPE +PP+A G GYV+ Sbjct: 70 PPFLLILVCTAPEHLNQRNAIRASWGAIREARGFRVQTLFLLGKPRRQQL-ADLSSESAAHRDILQASFQDSYRNLTLKTLS----GLNWVNKYCPMARYILKTDDDVYVNVPELVSELIQRGGPSEQWQKGKEAQEETTAIHEEHRGQAVPLLYLGRVHWRVRPTRTPESRHHVSEELWPENWGPFPPYASGTGYVL 262
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3G5A_XENLA (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5A OS=Xenopus laevis GN=b3gnt5-A PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13 Identity = 56/186 (30.11%), Postives = 93/186 (50.00%), Query Frame = 3 Query: 144 LRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRS---GTVAVRFFVGLH----KNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFG---TDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLY-GLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 L + + L++ V L + V + N +RR A+R TW +RS + V F +G K++ + +L NE + + D+ F D ++ +T K L FG + SAKF+M DDD FV +++ LK + + + + G ++ S P R SK+Y+ E +P +YP + G YVV Sbjct: 76 LNNRHICLNEDVLLLLFVKTAPENRRRRDAIRNTWGNEDFIRSQYDANIKVVFALGAEGDPVKSREIQQDLVNENKRFKDLIQQDFSDTFHNLTLKLLLQ--FGWVNSFCPSAKFIMSADDDIFVHTPNLVSYLKSLPIETQDFWIGRVHRGSPPIRRKTSKYYVPYEMYPWSSYPDYTAGAAYVV 259
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GT4_RAT (Beta-1,3-galactosyltransferase 4 OS=Rattus norvegicus GN=B3galt4 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.197e-13 Identity = 61/198 (30.81%), Postives = 91/198 (45.96%), Query Frame = 3 Query: 174 PVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVS-----AKFVMKTDDDAFVRVDEVLTSL------------------KRINVHS-------GLLY-GLINSESRPHRNPESKWYISLEEWPEE--TYPPWAHGPGYVV 668 P L I V + + +R A+R +W E R V F +G Q +L +E+ GD+ F D Y +T KTL G + V+ A++++KTDDD +V V E+++ L + VH LLY G ++ RP R PES+ ++S E WPE +PP+A G GYV+ Sbjct: 70 PPFLLILVCTAPEHLNQRNAIRGSWGAIREARGFRVQTLFLLGEPMGQQF-ADLASESAAQGDVLQASFQDSYRNLTLKTLT----GLNWVNKYCPMARYILKTDDDVYVNVPELVSELIQRGGPSEQWQKGKEPQEETTAVHKEHKGQAVPLLYLGRVHWRVRPTRTPESRHHVSEELWPENWGPFPPYASGTGYVL 262
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GL1_PIG (UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 OS=Sus scrofa GN=B3GALNT1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12 Identity = 51/179 (28.49%), Postives = 87/179 (48.60%), Query Frame = 3 Query: 144 LRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLH---KNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVV-SAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 LR + H+ L I V S + K R A+R TW + V F +G +++++ L +E YGDI F+D YN +T KT+ + T+ +A+++MKTD D F+ ++ L +N G ++ +R K +IS +E+P + +PP+ G GY++ Sbjct: 67 LREHSNCSHQNPFLVILVTSHPADVKARQAIRVTWGEKKSWWGYEVLTFFLLGQQAEREDKVLALSLEDEHLLYGDIIRQDFLDTYNNLTLKTIMAFRWVTEFCPNARYIMKTDTDVFINTGNLVKYLLNLNHSEKFFTGYPLIDNYSYRGFYQKTHISYQEYPFKVFPPYCSGLGYIM 245
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GN5_XENTR (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 OS=Xenopus tropicalis GN=b3gnt5 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.115e-12 Identity = 53/178 (29.78%), Postives = 90/178 (50.56%), Query Frame = 3 Query: 168 HKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRS---GTVAVRFFVGLH----KNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFG---TDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLY-GLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 ++ V L + V ++ N +RR A+R+TW +RS + V F +G+ K+ +L E + + D+ F D ++ +T K L FG + SAKF+M DDD FV +++ LK + + + + G ++ S P R+ SK+Y+ E +P +YP + G YVV Sbjct: 84 NEDVLLLLFVKTSPENRRRRNAIRKTWGNEDYIRSQYAANIKVVFALGIEADPVKSHQTQKDLVIENKRFNDLIQQDFKDTFHNLTLKLLLQ--FGWVNSYCPSAKFIMSADDDIFVHTPNLVSYLKSLPIETQDFWIGRVHRGSPPIRSKTSKYYVPYEMYPWSSYPDYTAGAAYVV 259
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GL1_RAT (UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 OS=Rattus norvegicus GN=B3galnt1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.115e-12 Identity = 50/166 (30.12%), Postives = 82/166 (49.40%), Query Frame = 3 Query: 183 LFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLH---KNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVV-SAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 L I V S ++ K R A+R TW + V F +G +++++ L +E YGDI F+D YN +T KT+ + + +AK+VMKTD D F+ ++ L +N G E+ +R K +IS +E+P + +PP+ G GY++ Sbjct: 80 LVILVTSRPSDVKARQAIRVTWGEKKTWWGHEVLTFFLLGQEAEREDKVLALSLEDEHALYGDIIRQDFLDTYNNLTLKTIMAFRWVIEFCPNAKYVMKTDTDVFINTGNLVKYLLNLNHSEKFFTGYPLIENYSYRGFFHKNHISYQEYPFKVFPPYCSGLGYIM 245 The following BLAST results are available for this feature:
BLAST of FC875390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875390 ID=FC875390; Name=FC875390; organism=Citrus clementina; type=EST; length=668bpback to top |