FC875390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GT2_MOUSE (Beta-1,3-galactosyltransferase 2 OS=Mus musculus GN=B3galt2 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12 Identity = 48/167 (28.74%), Postives = 79/167 (47.31%), Query Frame = 3 Query: 183 LFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFF---VGLHKNQIVNGELWNEARTYGDIQLMPFVD-YYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLY--GLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYV 665 L + + + + R A+R+TW T + G +R F + + N + + E+R Y DI ++D YYNL + + T +VMKTD D FV + ++ L + ++ Y G + P+RN +SKWY+ + +P E YP + G GYV Sbjct: 153 LILLIAAEPGQIEARRAIRQTWGNET-LAPGIQIIRVFLLGISIKLNGYLQHAIQEESRQYHDIIQQEYLDTYYNLTIKTLMGMNWVATYCPHTPYVMKTDSDMFVNTEYLIHKLLKPDLPPRHNYFTGYLMRGYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYV 318
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GN9_MOUSE (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 OS=Mus musculus GN=B3gnt9 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12 Identity = 56/173 (32.37%), Postives = 80/173 (46.24%), Query Frame = 3 Query: 180 DLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGE---------LWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVV-SAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 DL I V S A +F+RR AVR+TW V+ V F +G+ K G L E+R Y DI L F D + +T K + + + FV K D D FV V +L L+ + LL G + ++RP R SK++I + YP +A G G+V+ Sbjct: 119 DLLIAVKSVAADFERREAVRQTWGAEGRVQGALVRRVFLLGVPKGAGSGGAGTRSHWRTLLEAESRAYADILLWAFEDTFFNLTLKEIHFLSWASAFCPDVHFVFKGDADVFVHVRNLLQFLELRDPAQDLLAGDVIVQARPIRARASKYFIPRAVYGLPVYPAYAGGGGFVL 291
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GN5_HUMAN (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 OS=Homo sapiens GN=B3GNT5 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12 Identity = 54/173 (31.21%), Postives = 80/173 (46.24%), Query Frame = 3 Query: 183 LFIGVFSTANNFKRRMAVRRTWMQYTEVRS---GTVAVRFFVG----LHKNQIVNGELWNEARTYGDIQLMPFVD-YYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVD---EVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 L + V + N+ RR +RRTW VRS + F +G L ++ W + R Y DI FVD +YNL + T AKF+M DDD F+ + E L SL++I V + G ++ + P R+ SK+Y+S E + YP + G YV+ Sbjct: 90 LLLFVKTAPENYDRRSGIRRTWGNENYVRSQLNANIKTLFALGTPNPLEGEELQRKLAWEDQR-YNDIIQQDFVDSFYNLTLKLLMQFSWANTYCPHAKFLMTADDDIFIHMPNLIEYLQSLEQIGVQDFWI-GRVHRGAPPIRDKSSKYYVSYEMYQWPAYPDYTAGAAYVI 260
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GN9_HUMAN (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 OS=Homo sapiens GN=B3GNT9 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.063e-12 Identity = 61/201 (30.35%), Postives = 88/201 (43.78%), Query Frame = 3 Query: 147 RSYPLSLHKP------------VDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNG--ELWNEART------------YGDIQLMPFVDYYNLITWKTLAICIFGTDVV-SAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 R +PL +++P DL I V S A +F+RR AVR+TW V+ V F +G+ + G E+ ART Y DI L F D + +T K + + + +FV K D D FV V +L L + LL G + +RP R SK+YI + YP +A G G+V+ Sbjct: 94 RRFPLLINQPHKCRGDGAPGGRPDLLIAVKSVAEDFERRQAVRQTWGAEGRVQGALVRRVFLLGVPRGAGSGGADEVGEGARTHWRALLRAESLAYADILLWAFDDTFFNLTLKEIHFLAWASAFCPDVRFVFKGDADVFVNVGNLLEFLAPRDPAQDLLAGDVIVHARPIRTRASKYYIPEAVYGLPAYPAYAGGGGFVL 294
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GL1_MUSSI (UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 OS=Mus spicilegus GN=B3galnt1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.063e-12 Identity = 51/179 (28.49%), Postives = 86/179 (48.04%), Query Frame = 3 Query: 144 LRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLH---KNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVV-SAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 LR + H+ L I V S ++ K R A+R TW + V F +G +++ + L +E YGDI F+D YN +T KT+ + + +AK++MKTD D F+ ++ L +N G ++ +R K +IS +E+P + +PP+ G GY++ Sbjct: 67 LREHSNCSHQNPFLVILVTSRPSDVKARQAIRVTWGEKKSWWGYEVLTFFLLGQQAEREDKTLALSLEDEHVLYGDIIRQDFLDTYNNLTLKTIMAFRWVMEFCPNAKYIMKTDTDVFINTGNLVKYLLNLNHSEKFFTGYPLIDNYSYRGFFHKNHISYQEYPFKVFPPYCSGLGYIM 245
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GL1_MOUSE (UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 OS=Mus musculus GN=B3galnt1 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.063e-12 Identity = 51/179 (28.49%), Postives = 86/179 (48.04%), Query Frame = 3 Query: 144 LRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLH---KNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVV-SAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 LR + H+ L I V S ++ K R A+R TW + V F +G +++ + L +E YGDI F+D YN +T KT+ + + +AK++MKTD D F+ ++ L +N G ++ +R K +IS +E+P + +PP+ G GY++ Sbjct: 67 LREHSNCSHQNPFLVILVTSRPSDVKARQAIRVTWGEKKSWWGYEVLTFFLLGQQAEREDKTLALSLEDEHVLYGDIIRQDFLDTYNNLTLKTIMAFRWVMEFCPNAKYIMKTDTDVFINTGNLVKYLLNLNHSEKFFTGYPLIDNYSYRGFFHKNHISYQEYPFKVFPPYCSGLGYIM 245
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GT4_CANFA (Beta-1,3-galactosyltransferase 4 OS=Canis familiaris GN=B3GALT4 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.184e-11 Identity = 62/205 (30.24%), Postives = 88/205 (42.93%), Query Frame = 3 Query: 174 PVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVG----LHKNQIVNG-ELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVS-AKFVMKTDDDAFVRVDEVLTSLKRINVH-------------------------------SGLLY-GLINSESRPHRNPESKWYISLEEWPEE--TYPPWAHGPGYVV 668 P L I V + N +R A+R +W E + V + F +G H + + +L EA GDI F D Y +T KTL+ + S A++++KTDDD FV V E+++ L R H LLY G ++ P R P SK IS E+WP +PP+A G GYV+ Sbjct: 70 PPFLLILVCTAPENLNQRNAIRASWGGLREAQGFRVQILFLLGEPSLWHPTKEPHDIDLVREAAAQGDILQAAFRDSYRNLTLKTLSGLNWADKHCSMARYILKTDDDVFVNVPELVSELIRRGGHWEQWEKGKEPPRAVKAGDKEWEERPILKSQPMPLLYLGRVHWRVHPSRTPGSKHQISEEQWPPTWGPFPPYASGTGYVL 274
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: YI036_HUMAN (Putative UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase LOC402377 OS=Homo sapiens PE=5 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.546e-11 Identity = 43/168 (25.60%), Postives = 84/168 (50.00%), Query Frame = 3 Query: 171 KPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVV-SAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLY-GLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 K + L +FS+ N RR +R+TW T V+ + F +G+ + E+ E+ DI F+D T K +A+ + +A F++K D++ FV + ++ L + H +Y G + + P+R+P+++ ++ L E+PE+ YP + G +++ Sbjct: 82 KNIFLLSLIFSSPGNGTRRDLIRKTWGNVTSVQGHPILTLFALGMPVSVTTQKEINKESCKNNDIIEGIFLDSSENQTLKIIAMIQWAVAFCPNALFILKVDEETFVNLPSLVDYLLNLKEHLEDIYVGRVLHQVTPNRDPQNRDFVPLSEYPEKYYPDYCSGEAFIM 249
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GTD_ARATH (Probable beta-1,3-galactosyltransferase 13 OS=Arabidopsis thaliana GN=B3GALT13 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11 Identity = 48/168 (28.57%), Postives = 82/168 (48.81%), Query Frame = 3 Query: 186 FIGVFSTANNFKRRMAVRRTWM-------QYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 F+G+ + + RR A+R TWM + E +G +A+RF +G K++ EL +E Y D L+ + Y+ + +KTLA + ++F +K DDD ++R D + L + HS G + + +P+ KWY L + + Y A+GP Y + Sbjct: 87 FVGIQTGFRSAGRRRALRNTWMPSDPEGLRRLEESTG-LAIRFIIGKTKDEAKMVELRSEVAMYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERGHSQTYLGCM-KKGPVFTDPKLKWYEPLADLLGKEYFLHAYGPIYAL 252
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GT2_PONAB (Beta-1,3-galactosyltransferase 2 OS=Pongo abelii GN=B3GALT2 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11 Identity = 47/166 (28.31%), Postives = 77/166 (46.39%), Query Frame = 3 Query: 183 LFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLH--KNQIVNGELWNEARTYGDIQLMPFVD-YYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLY--GLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYV 665 L + + + + R A+R+TW + + F +GL N + + E+R Y DI ++D YYNL + + T +VMKTD D FV + ++ L + ++ Y G + P+RN +SKWY+ + +P E YP + G GYV Sbjct: 153 LILLIAAEPGQIEARRAIRQTWGNESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYLDTYYNLTIKTLMGMNWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGYLMRGYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYV 318 The following BLAST results are available for this feature:
BLAST of FC875390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875390 ID=FC875390; Name=FC875390; organism=Citrus clementina; type=EST; length=668bpback to top |