FC875390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GT2_HUMAN (Beta-1,3-galactosyltransferase 2 OS=Homo sapiens GN=B3GALT2 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11 Identity = 47/166 (28.31%), Postives = 77/166 (46.39%), Query Frame = 3 Query: 183 LFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLH--KNQIVNGELWNEARTYGDIQLMPFVD-YYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLY--GLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYV 665 L + + + + R A+R+TW + + F +GL N + + E+R Y DI ++D YYNL + + T +VMKTD D FV + ++ L + ++ Y G + P+RN +SKWY+ + +P E YP + G GYV Sbjct: 153 LILLIAAEPGQIEARRAIRQTWGNESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYLDTYYNLTIKTLMGMNWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGYLMRGYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYV 318
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3G5A_DANRE (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5A OS=Danio rerio GN=b3gnt5a PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11 Identity = 56/178 (31.46%), Postives = 87/178 (48.88%), Query Frame = 3 Query: 168 HKPVDLFIGVFSTANNFKRRMAVRRTW--MQYTEVRSGTVA-VRFFVGLHKNQ----IVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTD-VVSAKFVMKTDDDAFVRVDEV---LTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 +K V L + V S+ NFKRR A+R TW Y G V V F +G+ ++ + EL E + D+ F+D ++ +T K L + + A F+M DDD F+ V + L LK NV + L G ++ + P R +SK+Y+ + + +YP + G GYVV Sbjct: 85 NKDVLLLLFVKSSPGNFKRRQAIRSTWGNESYISQELGVVVKVVFAMGVRPDRSGHKTMQRELRKEHMAHHDLIQQDFLDTFHNLTVKLLLQFRWTHENCAHAHFLMSADDDVFIHVPNLVHYLQELKSQNVRN-LWVGHVHRGAPPVRKRDSKYYMPFDMYQWSSYPDYTAGAGYVV 261
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GTE_ARATH (Probable beta-1,3-galactosyltransferase 14 OS=Arabidopsis thaliana GN=B3GALT14 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 46/168 (27.38%), Postives = 81/168 (48.21%), Query Frame = 3 Query: 186 FIGVFSTANNFKRRMAVRRTWM-------QYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 F+G+ + + RR ++R+TWM + E +G +A+RF +G K++ +L E Y D L+ + Y+ + +KTLA + ++F +K DDD ++R D + L + HS G + + +P+ KWY L + Y A+GP Y + Sbjct: 89 FVGIQTGFGSAGRRRSLRKTWMPSDPEGLRRLEESTG-LAIRFMIGKTKSEEKMAQLRREIAEYDDFVLLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERSHSQTYLGCL-KKGPVFTDPKLKWYEPLSHLLGKEYFLHAYGPIYAL 254
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: BRN_DROME (Beta-1,3-galactosyltransferase brn OS=Drosophila melanogaster GN=brn PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11 Identity = 52/169 (30.77%), Postives = 84/169 (49.70%), Query Frame = 3 Query: 171 KPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVS-AKFVMKTDDDAFVRVDEVLTSLKR--INVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 +P L + + S N +RR A+RRTW E R V +R L + ++ E+R +GDI F D Y T KT+ + +D + ++F + DDD +V VL L R + LL+ ++ P R+ SKWY+SLEE+P + +PP+ +++ Sbjct: 76 QPARLTMLIKSAVGNSRRREAIRRTWGY--EGRFSDVHLRRVFLLGTAEDSEKDVAWESREHGDILQAEFTDAYFNNTLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPELLFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFIL 242
BLAST of FC875390 vs. ExPASy Swiss-Prot
Match: B3GN7_RAT (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 OS=Rattus norvegicus GN=B3gnt7 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11 Identity = 55/189 (29.10%), Postives = 82/189 (43.39%), Query Frame = 3 Query: 147 RSYPLSLHKP------VDLFIGVFSTANNFKRRMAVRRTWMQYTEVRS---GTVAVRFFVGLHKNQIVNGE----LWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVV--SAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVV 668 R +P+ L+ P V L + V S RR +R+TW E G V F +G Q L E R YGDI F+D + +T K + + D+ + F+ K DDD FV +L L L G + +RP R ++K+YI + + TYPP+A G G+++ Sbjct: 114 RYFPMLLNHPEKCAGDVYLLVVVKSVITQHDRREVIRQTWGHEWESAGPDRGAVRTLFLLGTASKQEERTHYQQLLAYEDRLYGDILQWDFLDSFFNLTLKEIHFLKW-LDIYCPNVPFIFKGDDDVFVNPTNLLEFLSDRQPQENLFVGDVLKHARPIRKKDNKYYIPAVMYSKATYPPYAGGGGFLM 301 The following BLAST results are available for this feature:
BLAST of FC875390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875390 ID=FC875390; Name=FC875390; organism=Citrus clementina; type=EST; length=668bpback to top |