FC875392

Overview
NameFC875392
Unique NameFC875392
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_NITHX (Adenylate kinase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=adk PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18
Identity = 49/120 (40.83%), Postives = 77/120 (64.17%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            + LG PG GKGT A RL +  G+  ++TG+++R  +A+  P+  +  ++++ G LV D+++I ++S RL+  +AK   GFILDGFPRTV QAE L+ +       +D V+ L + E ALL
Sbjct:    4 ILLGPPGAGKGTQAQRLVHHHGIVQLSTGEMLRAAVAAGTPVGLKAKDVMASGGLVPDDVVIGIISDRLDQSDAKN--GFILDGFPRTVPQAEALDRLLKSKNLKLDAVVELCVNESALL 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CORK4 (Adenylate kinase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=adk PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18
Identity = 53/131 (40.46%), Postives = 77/131 (58.78%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAE----ILEGV-TDIDLVINLKLRE----EALLANASEED 679
            V LG PG GKGT A+ LS+ LGVPH++TGDL R+ + ++  L  +    +  GKLV   + +N++  RL   +A    GF+LDGFPRTV Q +    IL+G+ T +D V+   + E    E +LA    +D
Sbjct:    4 VLLGPPGAGKGTQAAILSDKLGVPHVSTGDLFRENIGNNTELGQEAKSYIDAGKLVPTSVTVNMVKDRLSQDDAAD--GFLLDGFPRTVEQGDELKNILDGLGTKLDAVLQFDVSEDVVVERMLARGRADD 132          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CHLPB (Adenylate kinase OS=Chlorobium phaeobacteroides (strain BS1) GN=adk PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18
Identity = 47/120 (39.17%), Postives = 74/120 (61.67%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEG-VTDIDLVINLKLREEALLANAS 670
            + LG PG GKGT A  +S+   +P I+TGD++R  +    PL  +  +++  GKLVSDEII+ L+ +RL   + K   G + DGFPRT+ QA+ L+     ID VI++++ +E ++   S
Sbjct:    4 ILLGAPGAGKGTQAQFISSTFSIPQISTGDMLRAAINEGTPLGLEAKKVMDAGKLVSDEIILGLVKERLSKSDCKN--GCLFDGFPRTIAQADALKNDCIQIDHVIDIEVDDEEIIKRMS 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD1_EMENI (Adenylate kinase 1 OS=Emericella nidulans GN=adk1 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18
Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 2
Query:  302 HVQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALLA 661
            H++ + +G PG GKGT A ++     V H+ATGD++R ++A    L  +  +I+ QG LVSDEI++N++   LE   A+ + GFILDGFPRTV QAE L+ +       +   I LK+ +  L+A
Sbjct:   42 HMRIILMGPPGAGKGTQAPKIKEKYCVCHLATGDMLRSQVAKKTDLGREAKKIMDQGGLVSDEIMVNMIKSELE-NNAECKNGFILDGFPRTVAQAERLDEMLVARNQKLQHAIELKIDDALLVA 165          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CLONN (Adenylate kinase OS=Clostridium novyi (strain NT) GN=adk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.694e-18
Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 2
Query:  305 VQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILE 601
            ++ + LG PG GKGT A  +S    +PHI+TGD+ R  ++   PL  +  E + +G+LV DE+ I+L++ RL   + K   GF+LDGFPRTV+QAE LE
Sbjct:    1 MRMILLGPPGAGKGTQAKLISEKYSIPHISTGDIFRKNISEKTPLGVKAKEYMDKGQLVPDELTIDLVNDRLTHEDCK--KGFLLDGFPRTVKQAEALE 97          

HSP 2 Score: 21.9422 bits (45), Expect = 2.694e-18
Identity = 5/17 (29.41%), Postives = 12/17 (70.59%), Query Frame = 3
Query:  660 QMPRKKICSECGGNYNV 710
            +M  +++C  CG +Y++
Sbjct:  123 RMTGRRVCPSCGASYHI 139          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_TRIEI (Adenylate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=adk PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 46/96 (47.92%), Postives = 67/96 (69.79%), Query Frame = 2
Query:  305 VQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAE 592
            V+ VFLG PG GKGT AS +++   VPHI+TGD++R  +A   PL  +  + + +G LV D++I++++ +RLE   A+   G+ILDGFPRTV QAE
Sbjct:    2 VKLVFLGPPGAGKGTQASLIADFYKVPHISTGDILRSNVAERSPLGIKAKDYMDKGDLVPDQLILDMVKERLENPNAQN--GWILDGFPRTVTQAE 95          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_SYNS9 (Adenylate kinase OS=Synechococcus sp. (strain CC9902) GN=adk PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 48/120 (40.00%), Postives = 83/120 (69.17%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVTD-----IDLVINLKLREEALL 658
            +FLG PG GKGT A+R+ +  G+ H++TGDL+R E+A+   L  + + ++++G+LVSD++++ ++  +++A    GE G++LDGFPRTV QAE LE + +     I+ V+ L+L +  L+
Sbjct:    6 LFLGPPGAGKGTQAARICDSNGMKHLSTGDLLRSEVAAGSELGKEAEAVMNRGELVSDQLVLAIVESQMKA--LSGE-GWLLDGFPRTVPQAEALEPLLNELKQPIEAVVLLELDDAVLI 122          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_STAES (Adenylate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adk PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 46/120 (38.33%), Postives = 72/120 (60.00%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            + +G PG GKGT AS +     +PHI+TGD+ R  +     L  +    + +G+LV DE+ + ++ +R+   +AK   GF+LDGFPRT+ QAE L  +      +ID VIN+++ EE L+
Sbjct:    4 ILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKDETDLGKEAKSYMDRGELVPDEVTVGIVKERISEDDAK--KGFLLDGFPRTIDQAESLSQIMSELDREIDAVINIEVPEEELM 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_STAEQ (Adenylate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adk PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 46/120 (38.33%), Postives = 72/120 (60.00%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            + +G PG GKGT AS +     +PHI+TGD+ R  +     L  +    + +G+LV DE+ + ++ +R+   +AK   GF+LDGFPRT+ QAE L  +      +ID VIN+++ EE L+
Sbjct:    4 ILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKDETDLGKEAKSYMDRGELVPDEVTVGIVKERISEDDAK--KGFLLDGFPRTIDQAESLSQIMSELDREIDAVINIEVPEEELM 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CORJK (Adenylate kinase OS=Corynebacterium jeikeium (strain K411) GN=adk PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVT-----DIDLVINLKLREEALL 658
            V LG PG GKGT AS LS+ L VPHI+TGDL R  ++    L  Q  E +  GKLV   +  +++  RL   +A    GF+LDGFPRT+ QAE+LE +       +D VIN  + E+ ++
Sbjct:    4 VLLGPPGAGKGTQASLLSDALKVPHISTGDLFRANISQGTDLGKQAQEYMDAGKLVPTSVTADMVRDRLNQEDAAD--GFLLDGFPRTIEQAELLEKMLQDDGHSLDAVINYVVSEDVVV 121          
The following BLAST results are available for this feature:
BLAST of FC875392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_NITHX2.564e-1840.83Adenylate kinase OS=Nitrobacter hamburgensis (stra... [more]
KAD_CORK42.564e-1840.46Adenylate kinase OS=Corynebacterium kroppenstedtii... [more]
KAD_CHLPB2.564e-1839.17Adenylate kinase OS=Chlorobium phaeobacteroides (s... [more]
KAD1_EMENI2.564e-1840.80Adenylate kinase 1 OS=Emericella nidulans GN=adk1 ... [more]
KAD_CLONN2.694e-1845.45Adenylate kinase OS=Clostridium novyi (strain NT) ... [more]
KAD_TRIEI3.348e-1847.92Adenylate kinase OS=Trichodesmium erythraeum (stra... [more]
KAD_SYNS93.348e-1840.00Adenylate kinase OS=Synechococcus sp. (strain CC99... [more]
KAD_STAES3.348e-1838.33Adenylate kinase OS=Staphylococcus epidermidis (st... [more]
KAD_STAEQ3.348e-1838.33Adenylate kinase OS=Staphylococcus epidermidis (st... [more]
KAD_CORJK3.348e-1843.33Adenylate kinase OS=Corynebacterium jeikeium (stra... [more]

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Properties
Property NameValue
Genbank descriptionC31403D09EF CTVClemen1 Citrus clementina cDNA clone C31403D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875392 ID=FC875392; Name=FC875392; organism=Citrus clementina; type=EST; length=721bp
GGGGTCAAGAAGAGACCCATTCAAATCACCGCCATCTCTCTCTCTCTCTC
TCTTTCTCTCTCTCTCTCACAGTGGAGAATACGACATGTCGGTATTAAGC
CGTGTTTGGAGAGCGAGAGGCTCTACGGCGGCGACGACAACGACGACGTC
TTTGCAGACACTAATATTCCTGTCTCGTGCGCTCTCAACTTCTTGTGAAA
ATACCGGAATCGACCCCAAAGCAAAAGCAGGAGCAGCGGCGGCGCTGCCG
CTTAATAATAATAATAGTAAGAAGAAGAAAGAGGGGAAGGGCGAGGGCAA
ACATGTCCAGTGGGTTTTTCTGGGCTGCCCAGGCGTGGGCAAAGGTACTT
ATGCTTCTAGGCTGTCGAATTTGTTGGGAGTTCCTCACATCGCCACCGGT
GATCTCGTTCGCGACGAGCTCGCTTCCTCGGGCCCACTCTCCTCTCAGCT
CGATGAGATTGTTAGTCAGGGAAAGTTAGTTTCTGATGAAATTATAATAA
ATTTATTGTCCAAGCGTCTTGAAGCTGGAGAAGCTAAGGGTGAAGCTGGG
TTTATTCTTGATGGTTTTCCTCGAACTGTAAGACAGGCGGAAATATTGGA
GGGAGTGACTGACATTGACTTGGTGATTAACCTAAAGCTTCGAGAGGAGG
CATTGCTTGCAAATGCCTCGGAAGAAGATATGTAGTGAATGTGGAGGAAA
CTACAACGTTGCCTGTATTGA
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