FC875392

Overview
NameFC875392
Unique NameFC875392
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD1_PHANO (Adenylate kinase 1 OS=Phaeosphaeria nodorum GN=ADK1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = 2
Query:  305 VQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVTD 613
            V+ + +G PG GKGT A R+       H+ATGD++R ++A+  PL  +  +I+  G LVSDEI++N++   LE  +   + GFILDGFPRTV QAE L+G+ +
Sbjct:   44 VRMILMGPPGAGKGTQAPRIKEKFCACHLATGDMLRAQVAAKTPLGREAKKIMDAGGLVSDEIMVNMIKTELENNQECAK-GFILDGFPRTVTQAEKLDGMLE 145          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_XYLFT (Adenylate kinase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=adk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 48/120 (40.00%), Postives = 75/120 (62.50%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVT-----DIDLVINLKLREEALL 658
            V LG PG GKGT A+++   L +PHI+TGDL+R E+ +  PL  Q  ++++QG LVSD I++ +L  RL   +     GFILDG+PR + QA  L+G+       ++ V+ L++  + L+
Sbjct:    4 VLLGPPGSGKGTQAAQMQETLQIPHISTGDLLRSEVVAGTPLGLQAKQVMAQGDLVSDAILLGMLESRLSHTDV--VKGFILDGYPRNLSQAAALDGLLAKFGHPLNAVVQLEVPTDVLV 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_XYLF2 (Adenylate kinase OS=Xylella fastidiosa (strain M23) GN=adk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 48/120 (40.00%), Postives = 75/120 (62.50%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVT-----DIDLVINLKLREEALL 658
            V LG PG GKGT A+++   L +PHI+TGDL+R E+ +  PL  Q  ++++QG LVSD I++ +L  RL   +     GFILDG+PR + QA  L+G+       ++ V+ L++  + L+
Sbjct:    4 VLLGPPGSGKGTQAAQMQETLQIPHISTGDLLRSEVVAGTPLGLQAKQVMAQGDLVSDAILLGMLESRLSHTDV--VKGFILDGYPRNLSQAAALDGLLAKFGHPLNAVVQLEVPTDVLV 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_VIBHB (Adenylate kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=adk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 45/116 (38.79%), Postives = 74/116 (63.79%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-TDIDLVINLKLREEALL 658
            + LG PG GKGT A+ + +  G+P I+TGD++R  + +   L  Q   ++  G+LVSDEII+ L+ +R+   +   E GF+LDGFPRT+ QA+ L+ +  D+D VI   + ++ ++
Sbjct:    4 ILLGAPGAGKGTQANFIMDKYGIPQISTGDMLRAAIKAGTELGKQAKAVIDAGQLVSDEIILGLIKERIAQDDC--EKGFLLDGFPRTIPQADGLKEMGVDVDYVIEFDVADDVIV 117          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_SINMW (Adenylate kinase OS=Sinorhizobium medicae (strain WSM419) GN=adk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 49/120 (40.83%), Postives = 76/120 (63.33%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVTD-----IDLVINLKLREEALL 658
            +FLG PG GKGT A  L+   G+P ++TGD++R  +A +  +  +   ++  G+LVSDEI+  ++S R++A +     GFILDG+PRTV QA  L+ + +     +D VI LK+ E AL+
Sbjct:    4 IFLGPPGAGKGTQAKHLTERYGIPQLSTGDMLRAAVAQATEVGKRAKAVMDAGQLVSDEIVNEIVSDRIDAPDC--AKGFILDGYPRTVPQAVALDRMLEEKNLKLDAVIELKVDEAALV 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_LISMF (Adenylate kinase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=adk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 47/120 (39.17%), Postives = 73/120 (60.83%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            V +G PG GKGT A ++     +PHI+TGD+ R  + ++  L  +    +  G LV DE+   ++ +RL   +AK   GF+LDGFPRTV QAE LE +     T++D VIN+++ ++ L+
Sbjct:    4 VLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGKKAKSFMDNGDLVPDEVTNGIVRERLAEDDAKN--GFLLDGFPRTVEQAEELENILNDLGTELDAVINIEVDKDVLM 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_LISMC (Adenylate kinase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=adk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 47/120 (39.17%), Postives = 73/120 (60.83%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            V +G PG GKGT A ++     +PHI+TGD+ R  + ++  L  +    +  G LV DE+   ++ +RL   +AK   GF+LDGFPRTV QAE LE +     T++D VIN+++ ++ L+
Sbjct:    4 VLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGKKAKSFMDNGDLVPDEVTNGIVRERLAEDDAKN--GFLLDGFPRTVEQAEELENILNDLGTELDAVINIEVDKDVLM 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_LISIN (Adenylate kinase OS=Listeria innocua GN=adk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 47/120 (39.17%), Postives = 73/120 (60.83%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            V +G PG GKGT A ++     +PHI+TGD+ R  + ++  L  +    +  G LV DE+   ++ +RL   +AK   GF+LDGFPRTV QAE LE +     T++D VIN+++ ++ L+
Sbjct:    4 VLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGKKAKSFMDNGDLVPDEVTNGIVRERLAEDDAKN--GFLLDGFPRTVEQAEELENILSDLGTELDAVINIEVDKDVLM 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD2_DROVI (Adenylate kinase 2, mitochondrial OS=Drosophila virilis GN=Adk2 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 48/123 (39.02%), Postives = 77/123 (62.60%), Query Frame = 2
Query:  305 VQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            V  + LG PG GKGT A  L     V H++TGD++R E++S   L ++L +++ +GKLVSD+++++++   L+  E K   GF+LDGFPRTV QA+ L+ +     T +D VI   + +  L+
Sbjct:   19 VNAILLGPPGSGKGTQAPLLQKKFCVCHLSTGDMLRAEISSGSKLGAELKKVMDEGKLVSDDLVVDMIDSNLDKPECKN--GFLLDGFPRTVVQAQKLDTLLDKRRTSLDAVIEFAIDDNLLV 139          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD2_DROME (Adenylate kinase 2, mitochondrial OS=Drosophila melanogaster GN=Adk2 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 48/120 (40.00%), Postives = 76/120 (63.33%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            + LG PG GKGT A  L     V H++TGD++R E++S   L ++L +++  GKLVSD+++++++   L+  E K   GF+LDGFPRTV QAE L+ +     T++D VI   + +  L+
Sbjct:   22 ILLGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEISSGSKLGAELKKVMDAGKLVSDDLVVDMIDSNLDKPECKN--GFLLDGFPRTVVQAEKLDTLLDKRKTNLDAVIEFAIDDSLLV 139          
The following BLAST results are available for this feature:
BLAST of FC875392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD1_PHANO3.348e-1844.66Adenylate kinase 1 OS=Phaeosphaeria nodorum GN=ADK... [more]
KAD_XYLFT4.373e-1840.00Adenylate kinase OS=Xylella fastidiosa (strain Tem... [more]
KAD_XYLF24.373e-1840.00Adenylate kinase OS=Xylella fastidiosa (strain M23... [more]
KAD_VIBHB4.373e-1838.79Adenylate kinase OS=Vibrio harveyi (strain ATCC BA... [more]
KAD_SINMW4.373e-1840.83Adenylate kinase OS=Sinorhizobium medicae (strain ... [more]
KAD_LISMF4.373e-1839.17Adenylate kinase OS=Listeria monocytogenes serotyp... [more]
KAD_LISMC4.373e-1839.17Adenylate kinase OS=Listeria monocytogenes serotyp... [more]
KAD_LISIN4.373e-1839.17Adenylate kinase OS=Listeria innocua GN=adk PE=3 S... [more]
KAD2_DROVI4.373e-1839.02Adenylate kinase 2, mitochondrial OS=Drosophila vi... [more]
KAD2_DROME4.373e-1840.00Adenylate kinase 2, mitochondrial OS=Drosophila me... [more]

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Properties
Property NameValue
Genbank descriptionC31403D09EF CTVClemen1 Citrus clementina cDNA clone C31403D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875392 ID=FC875392; Name=FC875392; organism=Citrus clementina; type=EST; length=721bp
GGGGTCAAGAAGAGACCCATTCAAATCACCGCCATCTCTCTCTCTCTCTC
TCTTTCTCTCTCTCTCTCACAGTGGAGAATACGACATGTCGGTATTAAGC
CGTGTTTGGAGAGCGAGAGGCTCTACGGCGGCGACGACAACGACGACGTC
TTTGCAGACACTAATATTCCTGTCTCGTGCGCTCTCAACTTCTTGTGAAA
ATACCGGAATCGACCCCAAAGCAAAAGCAGGAGCAGCGGCGGCGCTGCCG
CTTAATAATAATAATAGTAAGAAGAAGAAAGAGGGGAAGGGCGAGGGCAA
ACATGTCCAGTGGGTTTTTCTGGGCTGCCCAGGCGTGGGCAAAGGTACTT
ATGCTTCTAGGCTGTCGAATTTGTTGGGAGTTCCTCACATCGCCACCGGT
GATCTCGTTCGCGACGAGCTCGCTTCCTCGGGCCCACTCTCCTCTCAGCT
CGATGAGATTGTTAGTCAGGGAAAGTTAGTTTCTGATGAAATTATAATAA
ATTTATTGTCCAAGCGTCTTGAAGCTGGAGAAGCTAAGGGTGAAGCTGGG
TTTATTCTTGATGGTTTTCCTCGAACTGTAAGACAGGCGGAAATATTGGA
GGGAGTGACTGACATTGACTTGGTGATTAACCTAAAGCTTCGAGAGGAGG
CATTGCTTGCAAATGCCTCGGAAGAAGATATGTAGTGAATGTGGAGGAAA
CTACAACGTTGCCTGTATTGA
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