FC875392

Overview
NameFC875392
Unique NameFC875392
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_AZOC5 (Adenylate kinase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=adk PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            V LG PG GKGT A RL    G+  ++TGD++R  +A+  P+  +   ++  G LVSDEI+I ++++RL+  +A+   GFILDGFPRTV QA+ L+ +       +D VI LK+ +  LL
Sbjct:    4 VLLGPPGAGKGTQALRLVQRHGIVQLSTGDMLRAAVAAGTPVGLKAKAVMESGGLVSDEIVIGIIAERLDQPDAR--KGFILDGFPRTVAQADALDKLLADKGLKLDAVIELKVDQAKLL 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD2_DROAN (Adenylate kinase 2, mitochondrial OS=Drosophila ananassae GN=Adk2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 48/120 (40.00%), Postives = 75/120 (62.50%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVTD-----IDLVINLKLREEALL 658
            + LG PG GKGT A  L     V H++TGD++R E++S   L ++L +++  GKLVSD+++++++   L+  E K   GF+LDGFPRTV QAE L+ + D     +D VI   + +  L+
Sbjct:   22 ILLGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEISSGSKLGAELKKVMDAGKLVSDDLVVDMIDSNLDKPECKN--GFLLDGFPRTVVQAEKLDTLLDKRKANLDAVIEFAIDDSLLV 139          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD2_CULQU (Adenylate kinase 2, mitochondrial OS=Culex quinquefasciatus GN=Adk2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 47/120 (39.17%), Postives = 76/120 (63.33%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVTD-----IDLVINLKLREEALL 658
            + LG PG GKGT A  L     V H++TGD++R E+A+   + +QL +++ +GKLVSD+++++++   L+  E +   GF+LDGFPRTV QAE L+ + D     +D VI   + +  L+
Sbjct:   23 ILLGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEIAAGSKIGAQLKKVMDEGKLVSDDLVVDMIDSNLDKPECRN--GFLLDGFPRTVVQAEKLDQLLDKRNTGLDAVIEFGIDDSLLV 140          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD1_PYRTR (Adenylate kinase 1 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=adk1 PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 46/101 (45.54%), Postives = 67/101 (66.34%), Query Frame = 2
Query:  305 VQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV 607
            V+ + +G PG GKGT A R+       H+ATGD++R ++A+  PL  +  +I+  G LVSDEI++N++   LE  + +   GFILDGFPRTV QAE L+G+
Sbjct:   43 VRMILMGPPGAGKGTQAPRIKEKFCACHLATGDMLRAQVAAKTPLGREAKKIMDAGGLVSDEIMVNMIKTELENNQ-ECARGFILDGFPRTVTQAEKLDGM 142          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD1_PODAN (Adenylate kinase 1 OS=Podospora anserina GN=ADK1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = 2
Query:  305 VQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAG-EAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALLA 661
            V+ + +G PG GKGT A RL       H+ATGD++R ++A   PL     +I+  G LVSDEI+I ++ + L+   E KG  GFILDGFPRTV QAE L+ +       +   + LK+ +E L+A
Sbjct:   42 VRAILIGPPGAGKGTQAPRLKEKFNCCHLATGDMLRSQVAKKTPLGQAAKKIMDAGGLVSDEIVIGMIKEELDNNKECKG--GFILDGFPRTVPQAEGLDKMLRERNQTLQHAVELKIDDELLVA 164          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CLOPH (Adenylate kinase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=adk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 5.924e-18
Identity = 45/124 (36.29%), Postives = 75/124 (60.48%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAE-----ILEGVTDIDLVINLKLREEALLANAS 670
            + LG PG GKGT A +++    +PHI+TGD+ R  + ++  L ++  E + QG LV DEI ++++  R    + K   G++LDGFPRT+ QAE     ++E    ID  IN+++ +E +++  S
Sbjct:    4 IMLGAPGAGKGTQAKKIAEKYKIPHISTGDIFRANIKNNTELGAKAKEYMDQGLLVPDEITLDMVMDRFAQDDCKN--GYVLDGFPRTIPQAEALNKALVEEGEQIDYAINIEVPDELIVSRMS 125          

HSP 2 Score: 22.3274 bits (46), Expect = 5.924e-18
Identity = 7/17 (41.18%), Postives = 11/17 (64.71%), Query Frame = 3
Query:  660 QMPRKKICSECGGNYNV 710
            +M  ++ C  CGG Y+V
Sbjct:  123 RMSGRRACVSCGGTYHV 139          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CLOBL (Adenylate kinase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=adk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.924e-18
Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQA----EILEGVT-DIDLVINLKLREEALL 658
            + LG PG GKGT A  +S    +PHI+TGD+ R  +    PL  +    +  G+LV DE+ I ++  RL   +   + GF+LDGFPRTV QA    E L+G+  ++D+ + +K+ EE +L
Sbjct:    4 ILLGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDC--DNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFIL 121          

HSP 2 Score: 22.7126 bits (47), Expect = 5.924e-18
Identity = 5/17 (29.41%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  660 QMPRKKICSECGGNYNV 710
            +M  +++C+ CG +Y++
Sbjct:  123 RMTGRRVCTSCGASYHI 139          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CLOB6 (Adenylate kinase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=adk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.924e-18
Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQA----EILEGVT-DIDLVINLKLREEALL 658
            + LG PG GKGT A  +S    +PHI+TGD+ R  +    PL  +    +  G+LV DE+ I ++  RL   +   + GF+LDGFPRTV QA    E L+G+  ++D+ + +K+ EE +L
Sbjct:    4 ILLGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDC--DNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFIL 121          

HSP 2 Score: 22.7126 bits (47), Expect = 5.924e-18
Identity = 5/17 (29.41%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  660 QMPRKKICSECGGNYNV 710
            +M  +++C+ CG +Y++
Sbjct:  123 RMTGRRVCTSCGASYHI 139          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CLOBA (Adenylate kinase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=adk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.924e-18
Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL 598
            V LG PG GKGT A  +SN   +PHI+TGD+ R  ++ + PL  +    + +G LV DE+ IN++  RL+  +    +G++LDGFPRTV QAE L
Sbjct:    4 VLLGPPGAGKGTQAKSISNRYSIPHISTGDIFRKNISENTPLGMEARSYMDKGLLVPDEVTINMVKDRLQEDDCL--SGYLLDGFPRTVAQAEAL 96          

HSP 2 Score: 23.483 bits (49), Expect = 5.924e-18
Identity = 5/17 (29.41%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  660 QMPRKKICSECGGNYNV 710
            +M  +++C+ CGG++++
Sbjct:  123 RMTGRRVCTSCGGSFHI 139          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CARHZ (Adenylate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=adk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.927e-18
Identity = 49/121 (40.50%), Postives = 76/121 (62.81%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILE------GVTDIDLVINLKLREEALL 658
            + +G PG GKGT A ++    G+ HI+TGD+ R  L +  PL  +  E + +G+LV DEI+I ++ +R+ A +     GF+LDGFPRT+ QAE L+      G+T +D VIN+++  E L+
Sbjct:    4 LIMGPPGAGKGTQAEKIVKEFGITHISTGDMFRAALKNQTPLGLKAKEYMDKGELVPDEIVIAMVEERISAPDC--AKGFLLDGFPRTIPQAEALDKKLAEMGIT-LDGVINIEVPREELI 121          

HSP 2 Score: 21.557 bits (44), Expect = 5.927e-18
Identity = 5/13 (38.46%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  672 KKICSECGGNYNV 710
            +++C +CG  Y+V
Sbjct:  127 RRVCRQCGATYHV 139          
The following BLAST results are available for this feature:
BLAST of FC875392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_AZOC55.711e-1842.50Adenylate kinase OS=Azorhizobium caulinodans (stra... [more]
KAD2_DROAN5.711e-1840.00Adenylate kinase 2, mitochondrial OS=Drosophila an... [more]
KAD2_CULQU5.711e-1839.17Adenylate kinase 2, mitochondrial OS=Culex quinque... [more]
KAD1_PYRTR5.711e-1845.54Adenylate kinase 1 OS=Pyrenophora tritici-repentis... [more]
KAD1_PODAN5.711e-1842.40Adenylate kinase 1 OS=Podospora anserina GN=ADK1 P... [more]
KAD_CLOPH5.924e-1836.29Adenylate kinase OS=Clostridium phytofermentans (s... [more]
KAD_CLOBL5.924e-1839.17Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_CLOB65.924e-1839.17Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_CLOBA5.924e-1845.26Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_CARHZ5.927e-1840.50Adenylate kinase OS=Carboxydothermus hydrogenoform... [more]

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Properties
Property NameValue
Genbank descriptionC31403D09EF CTVClemen1 Citrus clementina cDNA clone C31403D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875392 ID=FC875392; Name=FC875392; organism=Citrus clementina; type=EST; length=721bp
GGGGTCAAGAAGAGACCCATTCAAATCACCGCCATCTCTCTCTCTCTCTC
TCTTTCTCTCTCTCTCTCACAGTGGAGAATACGACATGTCGGTATTAAGC
CGTGTTTGGAGAGCGAGAGGCTCTACGGCGGCGACGACAACGACGACGTC
TTTGCAGACACTAATATTCCTGTCTCGTGCGCTCTCAACTTCTTGTGAAA
ATACCGGAATCGACCCCAAAGCAAAAGCAGGAGCAGCGGCGGCGCTGCCG
CTTAATAATAATAATAGTAAGAAGAAGAAAGAGGGGAAGGGCGAGGGCAA
ACATGTCCAGTGGGTTTTTCTGGGCTGCCCAGGCGTGGGCAAAGGTACTT
ATGCTTCTAGGCTGTCGAATTTGTTGGGAGTTCCTCACATCGCCACCGGT
GATCTCGTTCGCGACGAGCTCGCTTCCTCGGGCCCACTCTCCTCTCAGCT
CGATGAGATTGTTAGTCAGGGAAAGTTAGTTTCTGATGAAATTATAATAA
ATTTATTGTCCAAGCGTCTTGAAGCTGGAGAAGCTAAGGGTGAAGCTGGG
TTTATTCTTGATGGTTTTCCTCGAACTGTAAGACAGGCGGAAATATTGGA
GGGAGTGACTGACATTGACTTGGTGATTAACCTAAAGCTTCGAGAGGAGG
CATTGCTTGCAAATGCCTCGGAAGAAGATATGTAGTGAATGTGGAGGAAA
CTACAACGTTGCCTGTATTGA
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