FC875392

Overview
NameFC875392
Unique NameFC875392
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD1_ASPOR (Adenylate kinase 1 OS=Aspergillus oryzae GN=adk1 PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18
Identity = 46/100 (46.00%), Postives = 67/100 (67.00%), Query Frame = 2
Query:  302 HVQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILE 601
            H++ V +G PG GKGT A  L +   V H+ATGD++R ++A    L  +  +I+ QG LVSDEI++N++   L+   ++ + GFILDGFPRTV QAE L+
Sbjct:   42 HMRMVLMGPPGAGKGTQAPALKDKYCVCHLATGDMLRSQVAKKTELGKEAKKIMDQGGLVSDEIMVNMIKSELD-NNSECKNGFILDGFPRTVAQAERLD 140          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CLOBJ (Adenylate kinase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=adk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 7.703e-18
Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQA----EILEGVT-DIDLVINLKLREEALL 658
            + LG PG GKGT A  +S    +PHI+TGD+ R  +    PL  +    +  G+LV DE+ I ++  RL   +   + GF+LDGFPRTV QA    E L+G+  ++D+ + +K+ EE +L
Sbjct:    4 ILLGPPGAGKGTQAKLISEEFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDC--DNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFIL 121          

HSP 2 Score: 22.7126 bits (47), Expect = 7.703e-18
Identity = 5/17 (29.41%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  660 QMPRKKICSECGGNYNV 710
            +M  +++C+ CG +Y++
Sbjct:  123 RMTGRRVCTSCGASYHI 139          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CLOBH (Adenylate kinase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=adk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 7.703e-18
Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQA----EILEGVT-DIDLVINLKLREEALL 658
            + LG PG GKGT A  +S    +PHI+TGD+ R  +    PL  +    +  G+LV DE+ I ++  RL   +   + GF+LDGFPRTV QA    E L+G+  ++D+ + +K+ EE +L
Sbjct:    4 ILLGPPGAGKGTQAKLISEEFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDC--DNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFIL 121          

HSP 2 Score: 22.7126 bits (47), Expect = 7.703e-18
Identity = 5/17 (29.41%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  660 QMPRKKICSECGGNYNV 710
            +M  +++C+ CG +Y++
Sbjct:  123 RMTGRRVCTSCGASYHI 139          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CLOB1 (Adenylate kinase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=adk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 7.703e-18
Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQA----EILEGVT-DIDLVINLKLREEALL 658
            + LG PG GKGT A  +S    +PHI+TGD+ R  +    PL  +    +  G+LV DE+ I ++  RL   +   + GF+LDGFPRTV QA    E L+G+  ++D+ + +K+ EE +L
Sbjct:    4 ILLGPPGAGKGTQAKLISEEFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDC--DNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFIL 121          

HSP 2 Score: 22.7126 bits (47), Expect = 7.703e-18
Identity = 5/17 (29.41%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  660 QMPRKKICSECGGNYNV 710
            +M  +++C+ CG +Y++
Sbjct:  123 RMTGRRVCTSCGASYHI 139          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CLOBB (Adenylate kinase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=adk PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.703e-18
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL 598
            V LG PG GKGT A  +SN   +PHI+TGD+ R  ++ + PL  +    + +G LV DE+ IN++  RL+  E    +G++LDGFPRTV QAE L
Sbjct:    4 VLLGPPGAGKGTQAKSISNRYSIPHISTGDIFRKNISENTPLGMEARSYMDKGLLVPDEVTINMVKDRLQ--EEDCLSGYLLDGFPRTVAQAEAL 96          

HSP 2 Score: 23.483 bits (49), Expect = 7.703e-18
Identity = 5/17 (29.41%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  660 QMPRKKICSECGGNYNV 710
            +M  +++C+ CGG++++
Sbjct:  123 RMTGRRVCTSCGGSFHI 139          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_VIBSL (Adenylate kinase OS=Vibrio splendidus (strain LGP32) GN=adk PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 44/116 (37.93%), Postives = 73/116 (62.93%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-TDIDLVINLKLREEALL 658
            + LG PG GKGT A+ + N  G+P I+TGD++R  + +   L  Q   ++  G+LVSDEII+ L+ +R+   +   E GF+LDGFPRT+ QA+ L+ +   +D V+   + ++ ++
Sbjct:    4 ILLGAPGAGKGTQANFIMNKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDEIILGLIKERIAQDDC--EKGFLLDGFPRTIPQADGLKEMGIAVDYVVEFDVADDVIV 117          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_TERTT (Adenylate kinase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=adk PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 46/120 (38.33%), Postives = 76/120 (63.33%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALLANAS 670
            + LG PG GKGT A  +     +P I+TGD++R  + +  PL  ++ +I++ G+LVSD+III+L+ +R+   +     GF+ DGFPRT+ QAE L E   +I+ V+ + + +E ++A  S
Sbjct:    4 ILLGAPGAGKGTQAKFIMEAFEIPQISTGDMLRAAVKAGSPLGVKVKDIMASGQLVSDDIIIDLVKERISKPDCAN--GFLFDGFPRTIPQAEALTESGVEIEHVMEIHVDDEEIVARLS 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_SYNPW (Adenylate kinase OS=Synechococcus sp. (strain WH7803) GN=adk PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 47/120 (39.17%), Postives = 79/120 (65.83%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            +F+G PG GKGT ASRL    G+ H++TGDL+R E+++   L  + + ++++G+LVSD++++ ++  +L A   +   G++LDGFPR V QAE LE +       I+ V+ L+L +E L+
Sbjct:    6 LFIGPPGAGKGTQASRLCETHGLRHLSTGDLLRSEVSAGSALGQEAEAVMNRGELVSDDLVLAIVRSQLTALNGQ---GWLLDGFPRNVAQAEALEPLLGELQQSIETVVLLELDDEVLV 122          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_BREBN (Adenylate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=adk PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVT-----DIDLVINLKLREEALL 658
            + +G PG GKGT A R+     +PHI+TGD+ R  + +  PL  +    + +G LV DE++I ++ +RL   +     GF+LDGFPRTV QAE L         +ID VIN+ ++ E L+
Sbjct:    4 ILMGLPGAGKGTQAERIVKEFDIPHISTGDMFRAAVKNETPLGLEAKSYMDKGHLVPDEVVIGIVRERLSMDDC--AKGFLLDGFPRTVPQAEALTATVKELGREIDHVININVQREQLI 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD2_CAEEL (Adenylate kinase 2, mitochondrial OS=Caenorhabditis elegans GN=let-754 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 50/123 (40.65%), Postives = 73/123 (59.35%), Query Frame = 2
Query:  305 VQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            ++ +F+G PG GKGT A   +      H+ATGDL+R E+AS      +L   +  GKLVSDE++  L+ ++LE  E K   GFILDGFPRT  QAE L+ +     T +D V+   + ++ L+
Sbjct:   27 IRAIFIGPPGSGKGTQAPAFAQKYFSCHLATGDLLRAEVASGSEFGKELKATMDAGKLVSDEVVCKLIEQKLEKPECK--YGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIADDLLV 147          
The following BLAST results are available for this feature:
BLAST of FC875392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD1_ASPOR7.459e-1846.00Adenylate kinase 1 OS=Aspergillus oryzae GN=adk1 P... [more]
KAD_CLOBJ7.703e-1839.17Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_CLOBH7.703e-1839.17Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_CLOB17.703e-1839.17Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_CLOBB7.703e-1846.32Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_VIBSL9.742e-1837.93Adenylate kinase OS=Vibrio splendidus (strain LGP3... [more]
KAD_TERTT9.742e-1838.33Adenylate kinase OS=Teredinibacter turnerae (strai... [more]
KAD_SYNPW9.742e-1839.17Adenylate kinase OS=Synechococcus sp. (strain WH78... [more]
KAD_BREBN9.742e-1839.17Adenylate kinase OS=Brevibacillus brevis (strain 4... [more]
KAD2_CAEEL9.742e-1840.65Adenylate kinase 2, mitochondrial OS=Caenorhabditi... [more]

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Properties
Property NameValue
Genbank descriptionC31403D09EF CTVClemen1 Citrus clementina cDNA clone C31403D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875392 ID=FC875392; Name=FC875392; organism=Citrus clementina; type=EST; length=721bp
GGGGTCAAGAAGAGACCCATTCAAATCACCGCCATCTCTCTCTCTCTCTC
TCTTTCTCTCTCTCTCTCACAGTGGAGAATACGACATGTCGGTATTAAGC
CGTGTTTGGAGAGCGAGAGGCTCTACGGCGGCGACGACAACGACGACGTC
TTTGCAGACACTAATATTCCTGTCTCGTGCGCTCTCAACTTCTTGTGAAA
ATACCGGAATCGACCCCAAAGCAAAAGCAGGAGCAGCGGCGGCGCTGCCG
CTTAATAATAATAATAGTAAGAAGAAGAAAGAGGGGAAGGGCGAGGGCAA
ACATGTCCAGTGGGTTTTTCTGGGCTGCCCAGGCGTGGGCAAAGGTACTT
ATGCTTCTAGGCTGTCGAATTTGTTGGGAGTTCCTCACATCGCCACCGGT
GATCTCGTTCGCGACGAGCTCGCTTCCTCGGGCCCACTCTCCTCTCAGCT
CGATGAGATTGTTAGTCAGGGAAAGTTAGTTTCTGATGAAATTATAATAA
ATTTATTGTCCAAGCGTCTTGAAGCTGGAGAAGCTAAGGGTGAAGCTGGG
TTTATTCTTGATGGTTTTCCTCGAACTGTAAGACAGGCGGAAATATTGGA
GGGAGTGACTGACATTGACTTGGTGATTAACCTAAAGCTTCGAGAGGAGG
CATTGCTTGCAAATGCCTCGGAAGAAGATATGTAGTGAATGTGGAGGAAA
CTACAACGTTGCCTGTATTGA
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