FC875392

Overview
NameFC875392
Unique NameFC875392
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_YERPY (Adenylate kinase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 2 
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALL 658
            + LG PG GKGT A  +    G+P I+TGD++R  + +   L  +  EI+  GKLV+DE++I L+ +R+   + +   GF+LDGFPRT+ QA+ + E    +D V+   + +E ++
Sbjct:    4 ILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD--GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIV 117
[Close]
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_YERPS (Adenylate kinase OS=Yersinia pseudotuberculosis GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 2 
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALL 658
            + LG PG GKGT A  +    G+P I+TGD++R  + +   L  +  EI+  GKLV+DE++I L+ +R+   + +   GF+LDGFPRT+ QA+ + E    +D V+   + +E ++
Sbjct:    4 ILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD--GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIV 117
[Close]
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_YERPP (Adenylate kinase OS=Yersinia pestis (strain Pestoides F) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 2 
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALL 658
            + LG PG GKGT A  +    G+P I+TGD++R  + +   L  +  EI+  GKLV+DE++I L+ +R+   + +   GF+LDGFPRT+ QA+ + E    +D V+   + +E ++
Sbjct:    4 ILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD--GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIV 117
[Close]
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_YERPN (Adenylate kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 2 
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALL 658
            + LG PG GKGT A  +    G+P I+TGD++R  + +   L  +  EI+  GKLV+DE++I L+ +R+   + +   GF+LDGFPRT+ QA+ + E    +D V+   + +E ++
Sbjct:    4 ILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD--GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIV 117
[Close]
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_YERPG (Adenylate kinase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 2 
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALL 658
            + LG PG GKGT A  +    G+P I+TGD++R  + +   L  +  EI+  GKLV+DE++I L+ +R+   + +   GF+LDGFPRT+ QA+ + E    +D V+   + +E ++
Sbjct:    4 ILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD--GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIV 117
[Close]
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_YERPE (Adenylate kinase OS=Yersinia pestis GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 2 
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALL 658
            + LG PG GKGT A  +    G+P I+TGD++R  + +   L  +  EI+  GKLV+DE++I L+ +R+   + +   GF+LDGFPRT+ QA+ + E    +D V+   + +E ++
Sbjct:    4 ILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD--GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIV 117
[Close]
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_YERPB (Adenylate kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 2 
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALL 658
            + LG PG GKGT A  +    G+P I+TGD++R  + +   L  +  EI+  GKLV+DE++I L+ +R+   + +   GF+LDGFPRT+ QA+ + E    +D V+   + +E ++
Sbjct:    4 ILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD--GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIV 117
[Close]
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_YERPA (Adenylate kinase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 2 
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALL 658
            + LG PG GKGT A  +    G+P I+TGD++R  + +   L  +  EI+  GKLV+DE++I L+ +R+   + +   GF+LDGFPRT+ QA+ + E    +D V+   + +E ++
Sbjct:    4 ILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD--GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIV 117
[Close]
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_YERP3 (Adenylate kinase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 2 
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALL 658
            + LG PG GKGT A  +    G+P I+TGD++R  + +   L  +  EI+  GKLV+DE++I L+ +R+   + +   GF+LDGFPRT+ QA+ + E    +D V+   + +E ++
Sbjct:    4 ILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD--GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIV 117
[Close]
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_SHESR (Adenylate kinase OS=Shewanella sp. (strain MR-7) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 45/121 (37.19%), Postives = 75/121 (61.98%), Query Frame = 2 
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL--EGVTDIDLVINLKLREEALLANAS 670
            + LG PG GKGT A  +    G+P I+TGD++R  + +  PL  +  +++  G+LVSD++II L+ +R+   +     GF+LDGFPRT+ QA+ +   G++ ID VI + + +E ++   S
Sbjct:    4 ILLGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDC--VKGFLLDGFPRTIPQADAMAANGIS-IDHVIEIDVPDEEIVKRMS 121
The following BLAST results are available for this feature:
BLAST of FC875392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_YERPY2.399e-1637.07Adenylate kinase OS=Yersinia pseudotuberculosis se... [more]
KAD_YERPS2.399e-1637.07Adenylate kinase OS=Yersinia pseudotuberculosis GN... [more]
KAD_YERPP2.399e-1637.07Adenylate kinase OS=Yersinia pestis (strain Pestoi... [more]
KAD_YERPN2.399e-1637.07Adenylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]
KAD_YERPG2.399e-1637.07Adenylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]
KAD_YERPE2.399e-1637.07Adenylate kinase OS=Yersinia pestis GN=adk PE=3 SV... [more]
KAD_YERPB2.399e-1637.07Adenylate kinase OS=Yersinia pseudotuberculosis se... [more]
KAD_YERPA2.399e-1637.07Adenylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]
KAD_YERP32.399e-1637.07Adenylate kinase OS=Yersinia pseudotuberculosis se... [more]
KAD_SHESR2.399e-1637.19Adenylate kinase OS=Shewanella sp. (strain MR-7) G... [more]

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Properties
Property NameValue
Genbank descriptionC31403D09EF CTVClemen1 Citrus clementina cDNA clone C31403D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875392 ID=FC875392; Name=FC875392; organism=Citrus clementina; type=EST; length=721bp
GGGGTCAAGAAGAGACCCATTCAAATCACCGCCATCTCTCTCTCTCTCTC
TCTTTCTCTCTCTCTCTCACAGTGGAGAATACGACATGTCGGTATTAAGC
CGTGTTTGGAGAGCGAGAGGCTCTACGGCGGCGACGACAACGACGACGTC
TTTGCAGACACTAATATTCCTGTCTCGTGCGCTCTCAACTTCTTGTGAAA
ATACCGGAATCGACCCCAAAGCAAAAGCAGGAGCAGCGGCGGCGCTGCCG
CTTAATAATAATAATAGTAAGAAGAAGAAAGAGGGGAAGGGCGAGGGCAA
ACATGTCCAGTGGGTTTTTCTGGGCTGCCCAGGCGTGGGCAAAGGTACTT
ATGCTTCTAGGCTGTCGAATTTGTTGGGAGTTCCTCACATCGCCACCGGT
GATCTCGTTCGCGACGAGCTCGCTTCCTCGGGCCCACTCTCCTCTCAGCT
CGATGAGATTGTTAGTCAGGGAAAGTTAGTTTCTGATGAAATTATAATAA
ATTTATTGTCCAAGCGTCTTGAAGCTGGAGAAGCTAAGGGTGAAGCTGGG
TTTATTCTTGATGGTTTTCCTCGAACTGTAAGACAGGCGGAAATATTGGA
GGGAGTGACTGACATTGACTTGGTGATTAACCTAAAGCTTCGAGAGGAGG
CATTGCTTGCAAATGCCTCGGAAGAAGATATGTAGTGAATGTGGAGGAAA
CTACAACGTTGCCTGTATTGA
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