FC875392

Overview
NameFC875392
Unique NameFC875392
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_GEOBB (Adenylate kinase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 49/120 (40.83%), Postives = 72/120 (60.00%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            + LG PGVGKGT A  L +  G+P I+TGD++R  +    P+ ++    +  G LV DE++I ++ +RL   +A  + GFILDGFPRTV QA+ L  V       ID V++L + +  LL
Sbjct:    4 ILLGPPGVGKGTQAKLLIDRFGIPQISTGDILRAAVKELTPMGAKAKGYMDSGALVPDEVVIGIVEERL--AQADCQKGFILDGFPRTVPQADALGQVLSGMGKSIDHVVSLSVDKGELL 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_EDWI9 (Adenylate kinase OS=Edwardsiella ictaluri (strain 93-146) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 43/116 (37.07%), Postives = 70/116 (60.34%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALL 658
            + LG PG GKGT A  +    G+P I+TGD++R  + +   L  Q   I+  GKLV+DE++I L+ +R+   +     GF+LDGFPRT+ QA+ + E   ++D V+   + +E ++
Sbjct:    4 ILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGKQAKAIMDAGKLVTDELVIALVKERIAQEDCHN--GFLLDGFPRTIPQADAMKEAGINVDYVLEFAVPDELIV 117          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CHLTE (Adenylate kinase OS=Chlorobium tepidum GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 45/120 (37.50%), Postives = 72/120 (60.00%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILE-GVTDIDLVINLKLREEALLANAS 670
            + LG PG GKGT A  +S   G+P I+TGD++R  + ++ PL     +I+ +G LV D++II+L+ +R+   +     G + DGFPRT+ QAE L  G   ID +I + + +E ++   S
Sbjct:    4 ILLGAPGAGKGTQAQYISEAFGIPQISTGDMLRAAVKAATPLGLAAKKIMDEGGLVPDDLIISLVKERIAQPDCAN--GCLFDGFPRTLAQAEALRAGGIRIDHIIEMNVPDEEIIKRMS 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_BORRA (Adenylate kinase OS=Borrelia recurrentis (strain A1) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 49/113 (43.36%), Postives = 67/113 (59.29%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQA----EILEGVTDIDLVINLKL 640
            VFLG PG GKGT A  LSN L   HI+TGDL R  + +  PL  ++ +IV  G+LV D I I ++  ++   + +    FILDGFPR + QA     +LE +  I+ +IN KL
Sbjct:    4 VFLGPPGSGKGTIAKILSNELNYYHISTGDLFRTNIENDTPLGKEIKQIVENGQLVPDSITIKVVEDKINTIDNRD--NFILDGFPRNINQAIELDRLLENIKIINFLINEKL 114          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_SHEB9 (Adenylate kinase OS=Shewanella baltica (strain OS195) GN=adk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16
Identity = 45/121 (37.19%), Postives = 75/121 (61.98%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL--EGVTDIDLVINLKLREEALLANAS 670
            + LG PG GKGT A  +    G+P I+TGD++R  + +  PL  +  +++  G+LVSD++II L+ +R+   +     GF+LDGFPRT+ QA+ +   G++ ID VI + + +E ++   S
Sbjct:    4 ILLGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQEDC--VKGFLLDGFPRTIPQADAMAANGIS-IDHVIEIDVPDEEIVKRMS 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_SHEB8 (Adenylate kinase OS=Shewanella baltica (strain OS185) GN=adk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16
Identity = 45/121 (37.19%), Postives = 75/121 (61.98%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL--EGVTDIDLVINLKLREEALLANAS 670
            + LG PG GKGT A  +    G+P I+TGD++R  + +  PL  +  +++  G+LVSD++II L+ +R+   +     GF+LDGFPRT+ QA+ +   G++ ID VI + + +E ++   S
Sbjct:    4 ILLGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQEDC--VKGFLLDGFPRTIPQADAMAANGIS-IDHVIEIDVPDEEIVKRMS 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_SHEB5 (Adenylate kinase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=adk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16
Identity = 45/121 (37.19%), Postives = 75/121 (61.98%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL--EGVTDIDLVINLKLREEALLANAS 670
            + LG PG GKGT A  +    G+P I+TGD++R  + +  PL  +  +++  G+LVSD++II L+ +R+   +     GF+LDGFPRT+ QA+ +   G++ ID VI + + +E ++   S
Sbjct:    4 ILLGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQEDC--VKGFLLDGFPRTIPQADAMAANGIS-IDHVIEIDVPDEEIVKRMS 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_SHEB2 (Adenylate kinase OS=Shewanella baltica (strain OS223) GN=adk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16
Identity = 45/121 (37.19%), Postives = 75/121 (61.98%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL--EGVTDIDLVINLKLREEALLANAS 670
            + LG PG GKGT A  +    G+P I+TGD++R  + +  PL  +  +++  G+LVSD++II L+ +R+   +     GF+LDGFPRT+ QA+ +   G++ ID VI + + +E ++   S
Sbjct:    4 ILLGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQEDC--VKGFLLDGFPRTIPQADAMAANGIS-IDHVIEIDVPDEEIVKRMS 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_PSEF5 (Adenylate kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=adk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16
Identity = 41/116 (35.34%), Postives = 72/116 (62.07%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAE-ILEGVTDIDLVINLKLREEALL 658
            + LG PG GKGT A  ++   G+P I+TGD++R  + +   L  +   ++  G LVSD++IINL+ +R+   +     GF+ DGFPRT+ QAE +++   ++D V+ + + +E ++
Sbjct:    4 ILLGAPGAGKGTQAKFITEKFGIPQISTGDMLRAAVKAGTELGLKAKSVMDSGGLVSDDLIINLVKERISQADCVN--GFLFDGFPRTIPQAEALVKAGVELDNVVEIAVDDEEIV 117          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_PHOLL (Adenylate kinase OS=Photorhabdus luminescens subsp. laumondii GN=adk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16
Identity = 41/116 (35.34%), Postives = 72/116 (62.07%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALL 658
            + LG PG GKGT A  +    G+P I+TGD++R  + +   L  +   ++  GKLV+DE++I L+ +R++  + +   GF+LDGFPRT+ QA+ + E   ++D V+   + +E ++
Sbjct:    4 ILLGAPGAGKGTQAQFIVEKYGIPQISTGDMLRSAVKAGTELGLKAKALMDHGKLVTDELVIALVKERIKQDDCRN--GFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELII 117          
The following BLAST results are available for this feature:
BLAST of FC875392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_GEOBB2.399e-1640.83Adenylate kinase OS=Geobacter bemidjiensis (strain... [more]
KAD_EDWI92.399e-1637.07Adenylate kinase OS=Edwardsiella ictaluri (strain ... [more]
KAD_CHLTE2.399e-1637.50Adenylate kinase OS=Chlorobium tepidum GN=adk PE=3... [more]
KAD_BORRA2.399e-1643.36Adenylate kinase OS=Borrelia recurrentis (strain A... [more]
KAD_SHEB93.134e-1637.19Adenylate kinase OS=Shewanella baltica (strain OS1... [more]
KAD_SHEB83.134e-1637.19Adenylate kinase OS=Shewanella baltica (strain OS1... [more]
KAD_SHEB53.134e-1637.19Adenylate kinase OS=Shewanella baltica (strain OS1... [more]
KAD_SHEB23.134e-1637.19Adenylate kinase OS=Shewanella baltica (strain OS2... [more]
KAD_PSEF53.134e-1635.34Adenylate kinase OS=Pseudomonas fluorescens (strai... [more]
KAD_PHOLL3.134e-1635.34Adenylate kinase OS=Photorhabdus luminescens subsp... [more]

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Properties
Property NameValue
Genbank descriptionC31403D09EF CTVClemen1 Citrus clementina cDNA clone C31403D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875392 ID=FC875392; Name=FC875392; organism=Citrus clementina; type=EST; length=721bp
GGGGTCAAGAAGAGACCCATTCAAATCACCGCCATCTCTCTCTCTCTCTC
TCTTTCTCTCTCTCTCTCACAGTGGAGAATACGACATGTCGGTATTAAGC
CGTGTTTGGAGAGCGAGAGGCTCTACGGCGGCGACGACAACGACGACGTC
TTTGCAGACACTAATATTCCTGTCTCGTGCGCTCTCAACTTCTTGTGAAA
ATACCGGAATCGACCCCAAAGCAAAAGCAGGAGCAGCGGCGGCGCTGCCG
CTTAATAATAATAATAGTAAGAAGAAGAAAGAGGGGAAGGGCGAGGGCAA
ACATGTCCAGTGGGTTTTTCTGGGCTGCCCAGGCGTGGGCAAAGGTACTT
ATGCTTCTAGGCTGTCGAATTTGTTGGGAGTTCCTCACATCGCCACCGGT
GATCTCGTTCGCGACGAGCTCGCTTCCTCGGGCCCACTCTCCTCTCAGCT
CGATGAGATTGTTAGTCAGGGAAAGTTAGTTTCTGATGAAATTATAATAA
ATTTATTGTCCAAGCGTCTTGAAGCTGGAGAAGCTAAGGGTGAAGCTGGG
TTTATTCTTGATGGTTTTCCTCGAACTGTAAGACAGGCGGAAATATTGGA
GGGAGTGACTGACATTGACTTGGTGATTAACCTAAAGCTTCGAGAGGAGG
CATTGCTTGCAAATGCCTCGGAAGAAGATATGTAGTGAATGTGGAGGAAA
CTACAACGTTGCCTGTATTGA
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