FC875392

Overview
NameFC875392
Unique NameFC875392
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_HAMD5 (Adenylate kinase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16
Identity = 45/120 (37.50%), Postives = 73/120 (60.83%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALLANAS 670
            + LG PG GKGT A  +    G+  I+TGD++R  + +   L  Q+  I++ GKLV+D+++I L+ +R+   + K   GF+LDGFPRT+ QA+ + E    ID V+ L + +E ++   S
Sbjct:    4 ILLGAPGAGKGTQAQFIMKKYGIVQISTGDMLRAAVKAGTKLGQQVQGIMAAGKLVTDDLVIALVKERIRQEDCK--EGFLLDGFPRTIPQADAMAEADIKIDYVLELVVPDEFIVERIS 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_ENTFA (Adenylate kinase OS=Enterococcus faecalis GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16
Identity = 43/120 (35.83%), Postives = 72/120 (60.00%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            + +G PG GKGT A ++ +  G+PHI+TGD+ R  + +   L  +    + +G+LV DE+   ++ +RL   E   + GF+LDGFPRT+ QA+ L+ +       ID VI++ + E+ L+
Sbjct:    4 ILMGLPGAGKGTQAEKIIDTYGIPHISTGDMFRAAMKNETALGLEAKSYIDKGELVPDEVTNGIVKERL--AEPDTDKGFLLDGFPRTLDQAKALDTMLKELNKKIDAVIDIHVEEDVLI 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_CITK8 (Adenylate kinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16
Identity = 43/116 (37.07%), Postives = 70/116 (60.34%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEIL-EGVTDIDLVINLKLREEALL 658
            + LG PG GKGT A  +    G+  I+TGD++R  + S   L  Q  +I+  GKLV+DE++I L+ +R+   + +   GF+LDGFPRT+ QA+ + E    +D V+   + +E ++
Sbjct:    4 ILLGAPGAGKGTQAQFIMEKYGIVQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQDDCRN--GFLLDGFPRTIPQADAMKEAGIAVDYVLEFDVPDELIV 117          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_BORPE (Adenylate kinase OS=Bordetella pertussis GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16
Identity = 44/121 (36.36%), Postives = 73/121 (60.33%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-TDIDLVINLKLREEALLANASE 673
            + LG PG GKGT A+ L+   G+P I+TGD++R  + +  PL  +  +++  G LVSD++II L+  RL   +     G++ DGFPRT+ QA+ L+     +D V+ +++ E  ++   SE
Sbjct:    4 ILLGPPGAGKGTQAAFLTQHYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGGLVSDDLIIGLVRDRLTQPDCAN--GYLFDGFPRTIPQADALKSAGIALDYVVEIEVPESDIIERMSE 122          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_BORDL (Adenylate kinase OS=Borrelia duttonii (strain Ly) GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16
Identity = 48/119 (40.34%), Postives = 69/119 (57.98%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVTDIDLVINLKLREEALLANAS 670
            VFLG PG GKGT A  LSN L   HI+TGDL R  + +  PL  ++ +IV  G+LV D I I ++  ++   + +    FILDGFPR + QA  L+ + +   +IN  + E+ L+   S
Sbjct:    4 VFLGPPGSGKGTIAKILSNELNYYHISTGDLFRTNIENDTPLGKEIKQIVENGQLVPDSITIKVVEDKINTIDNRD--NFILDGFPRNINQAIELDRLLENIKIINFLIDEKLLVKRLS 120          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_BORBU (Adenylate kinase OS=Borrelia burgdorferi GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16
Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVTDIDLVINLKLREEALLANAS 670
            VFLG PG GKGT +  +SN     HI+TGDL R+ + +S  L  ++ +IV +G+LV D I I ++  +++A   K    FILDGFPR + QAE L+       +IN  + EE ++   S
Sbjct:    4 VFLGPPGSGKGTISKIISNEFKYQHISTGDLFRENILNSTALGQEIKKIVERGELVPDLITIKIVEDKIKA--IKKNKDFILDGFPRNICQAEALDKFLPNVKIINFLIDEELVIKRLS 120          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD1_SCHPO (Adenylate kinase 1 OS=Schizosaccharomyces pombe GN=adk1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16
Identity = 45/120 (37.50%), Postives = 72/120 (60.00%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEALL 658
            + +G PG GKGT A  +    G+ H+ATGD++R ++A    L  +  +I+ QG LVSD+I+  ++   +     + + GFILDGFPRTV QAE L  +      D++ V+ L++ +E L+
Sbjct:    7 ILVGPPGAGKGTQAPNIQKKYGIAHLATGDMLRSQVARQTELGKEAKKIMDQGGLVSDDIVTGMIKDEI-LNNPECKNGFILDGFPRTVVQAEKLTALLDELKLDLNTVLELQVDDELLV 125          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD1_ARATH (Adenylate kinase 1 OS=Arabidopsis thaliana GN=ADK1 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16
Identity = 45/119 (37.82%), Postives = 76/119 (63.87%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGV-----TDIDLVINLKLREEAL 655
            +F+G PG GKGT +  + +   + H++TGD++R  +AS  PL  +  E + +G+LVSD++++ ++ + +   + K + GFILDGFPRTV QAE L+ +     T+ID V+N  + +  L
Sbjct:   37 IFIGPPGSGKGTQSPVVKDEYCLCHLSTGDMLRAAVASKTPLGVKAKEAMEKGELVSDDLVVGIIDEAM--NKPKCQKGFILDGFPRTVTQAEKLDEMLKRRGTEIDKVLNFAIDDAIL 153          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_PROMM (Adenylate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=adk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16
Identity = 45/120 (37.50%), Postives = 76/120 (63.33%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVTD-----IDLVINLKLREEALL 658
            +FLG PG GKGT A RL     + H++TGDL+R E+ +  PL  +   ++++G+LVSDE+++ ++  +L+        G++LDGFPRT+ QA+ LE + +     I+ V+ L+L +  L+
Sbjct:    6 LFLGPPGAGKGTQAERLCAAHELMHLSTGDLLRTEVGAKTPLGQEAAAVMNRGELVSDELVLAIVENQLK----NQNGGWLLDGFPRTLIQAKALEPLLEELKQPIEAVVLLELNDAVLI 121          
BLAST of FC875392 vs. ExPASy Swiss-Prot
Match: KAD_PROM1 (Adenylate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=adk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16
Identity = 47/125 (37.60%), Postives = 78/125 (62.40%), Query Frame = 2
Query:  314 VFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELASSGPLSSQLDEIVSQGKLVSDEIIINLLSKRLEAGEAKGEAGFILDGFPRTVRQAEILEGVTD-----IDLVINLKLREEALLANASE 673
            +FLG PG GKGT A+      G+ H++TGDL+RDE++S   L  +  EI+++G+LVSDE++++++  RL         G++LDGFPR V QA  L+ + +     ++ VI +K+ ++ L+    E
Sbjct:    6 LFLGPPGAGKGTQANLFCKKYGLIHLSTGDLLRDEVSSGSVLGIKAAEIMNKGELVSDELVLSIVEGRL----LNINEGWLLDGFPRNVNQANSLKDLLEKINQPLEGVILIKVADDYLIKRLVE 126          
The following BLAST results are available for this feature:
BLAST of FC875392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_HAMD54.093e-1637.50Adenylate kinase OS=Hamiltonella defensa subsp. Ac... [more]
KAD_ENTFA4.093e-1635.83Adenylate kinase OS=Enterococcus faecalis GN=adk P... [more]
KAD_CITK84.093e-1637.07Adenylate kinase OS=Citrobacter koseri (strain ATC... [more]
KAD_BORPE4.093e-1636.36Adenylate kinase OS=Bordetella pertussis GN=adk PE... [more]
KAD_BORDL4.093e-1640.34Adenylate kinase OS=Borrelia duttonii (strain Ly) ... [more]
KAD_BORBU4.093e-1640.34Adenylate kinase OS=Borrelia burgdorferi GN=adk PE... [more]
KAD1_SCHPO4.093e-1637.50Adenylate kinase 1 OS=Schizosaccharomyces pombe GN... [more]
KAD1_ARATH4.093e-1637.82Adenylate kinase 1 OS=Arabidopsis thaliana GN=ADK1... [more]
KAD_PROMM5.346e-1637.50Adenylate kinase OS=Prochlorococcus marinus (strai... [more]
KAD_PROM15.346e-1637.60Adenylate kinase OS=Prochlorococcus marinus (strai... [more]

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Properties
Property NameValue
Genbank descriptionC31403D09EF CTVClemen1 Citrus clementina cDNA clone C31403D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875392 ID=FC875392; Name=FC875392; organism=Citrus clementina; type=EST; length=721bp
GGGGTCAAGAAGAGACCCATTCAAATCACCGCCATCTCTCTCTCTCTCTC
TCTTTCTCTCTCTCTCTCACAGTGGAGAATACGACATGTCGGTATTAAGC
CGTGTTTGGAGAGCGAGAGGCTCTACGGCGGCGACGACAACGACGACGTC
TTTGCAGACACTAATATTCCTGTCTCGTGCGCTCTCAACTTCTTGTGAAA
ATACCGGAATCGACCCCAAAGCAAAAGCAGGAGCAGCGGCGGCGCTGCCG
CTTAATAATAATAATAGTAAGAAGAAGAAAGAGGGGAAGGGCGAGGGCAA
ACATGTCCAGTGGGTTTTTCTGGGCTGCCCAGGCGTGGGCAAAGGTACTT
ATGCTTCTAGGCTGTCGAATTTGTTGGGAGTTCCTCACATCGCCACCGGT
GATCTCGTTCGCGACGAGCTCGCTTCCTCGGGCCCACTCTCCTCTCAGCT
CGATGAGATTGTTAGTCAGGGAAAGTTAGTTTCTGATGAAATTATAATAA
ATTTATTGTCCAAGCGTCTTGAAGCTGGAGAAGCTAAGGGTGAAGCTGGG
TTTATTCTTGATGGTTTTCCTCGAACTGTAAGACAGGCGGAAATATTGGA
GGGAGTGACTGACATTGACTTGGTGATTAACCTAAAGCTTCGAGAGGAGG
CATTGCTTGCAAATGCCTCGGAAGAAGATATGTAGTGAATGTGGAGGAAA
CTACAACGTTGCCTGTATTGA
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