FC875393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875393 vs. ExPASy Swiss-Prot
Match: 2ABG_RABIT (Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Oryctolagus cuniculus GN=PPP2R2C PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 4.784e-81 Identity = 138/222 (62.16%), Postives = 183/222 (82.43%), Query Frame = 3 Query: 54 VSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGGRVATGSYSNLFRVF 719 V+SL++PV+ + + RRI+A+ H YHINSIS NSD ET++SADDLRINLW+L ++++SFNIVD+KPANMEDLTEVIT++EFHP HCN+ YSSSKGS+RL DMR +ALCD HSKLFEE E P RSFF+EII+S+SD+KF+ +GR++L+RDY+T+K+WD+NM++ P+ T+QVH++LR KLC LYEND IFDKFEC +G + TG+Y+N FR+F Sbjct: 145 VTSLQVPVL-KPMDLMVEVSPRRIFANGHTYHINSISVNSDCETYMSADDLRINLWHLAVTDRSFNIVDIKPANMEDLTEVITASEFHPHHCNLFVYSSSKGSLRLCDMRAAALCDKHSKLFEEPEDPSNRSFFSEIISSVSDVKFSHSGRYMLTRDYLTVKVWDLNMEARPIETYQVHDYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTGAYNNFFRMF 365
BLAST of FC875393 vs. ExPASy Swiss-Prot
Match: 2ABG_RAT (Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Rattus norvegicus GN=Ppp2r2c PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.392e-80 Identity = 138/222 (62.16%), Postives = 183/222 (82.43%), Query Frame = 3 Query: 54 VSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGGRVATGSYSNLFRVF 719 V+SL++PV+ + + RRI+A+ H YHINSIS NSD ET++SADDLRINLW+L I+++SFNIVD+KPANMEDLTEVIT++EFHP HCN+ YSSSKGS+RL DMR +ALCD HSKLFEE E P RSFF+EII+S+SD+KF+ +GR++L+RDY+T+K+WD+NM++ P+ T+QVH++LR KLC LYE+D IFDKFEC +G + TG+Y+N FR+F Sbjct: 145 VTSLQVPVL-KPMDLMVEVSPRRIFANGHTYHINSISVNSDCETYMSADDLRINLWHLAITDRSFNIVDIKPANMEDLTEVITASEFHPHHCNLFVYSSSKGSLRLCDMRAAALCDKHSKLFEEPEDPSNRSFFSEIISSVSDVKFSHSGRYMLTRDYLTVKVWDLNMEARPIETYQVHDYLRSKLCSLYESDCIFDKFECAWNGSDSVIMTGAYNNFFRMF 365
BLAST of FC875393 vs. ExPASy Swiss-Prot
Match: 2ABG_MOUSE (Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Mus musculus GN=Ppp2r2c PE=2 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 5.289e-80 Identity = 137/222 (61.71%), Postives = 182/222 (81.98%), Query Frame = 3 Query: 54 VSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGGRVATGSYSNLFRVF 719 V+SL++PV+ + + RR +A+ H YHINSIS NSD ET++SADDLRINLW+L I+++SFNIVD+KPANMEDLTEVIT++EFHP HCN+ YSSSKGS+RL DMR +ALCD HSKLFEE E P RSFF+EII+S+SD+KF+ +GR++L+RDY+T+K+WD+NM++ P+ T+QVH++LR KLC LYE+D IFDKFEC +G + TG+Y+N FR+F Sbjct: 145 VTSLQVPVL-KPMDLMVEVSPRRTFANGHTYHINSISVNSDCETYMSADDLRINLWHLAITDRSFNIVDIKPANMEDLTEVITASEFHPHHCNLFVYSSSKGSLRLCDMRAAALCDKHSKLFEEPEDPSNRSFFSEIISSVSDVKFSHSGRYMLTRDYLTVKVWDLNMEARPIETYQVHDYLRSKLCSLYESDCIFDKFECAWNGSDSVIMTGAYNNFFRMF 365
BLAST of FC875393 vs. ExPASy Swiss-Prot
Match: 2ABA_CANTR (Protein phosphatase PP2A regulatory subunit B OS=Candida tropicalis GN=CDC55 PE=3 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.103e-77 Identity = 137/223 (61.43%), Postives = 177/223 (79.37%), Query Frame = 3 Query: 51 GVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGGRVATGSYSNLFRVF 719 G+ SL+LP + + + A ++IYA+AH YHINSIS NSD ET++SADDLRINLWNL I++QSFNIVD+KPANME+LTEVITSAEFHP CN+ YSSSKG+I+L DMR ++LCD+H+K+FEE P + +FFTEI +SISD+KF+ +GR+I SRDYMT+K+WD+ M++ P+ T VHEHLR +LCD YEND+IFDKFE GD V TGSY+N F ++ Sbjct: 139 GIESLKLPQLQLHDKL-ISAQPKKIYANAHAYHINSISVNSDQETYLSADDLRINLWNLGIADQSFNIVDIKPANMEELTEVITSAEFHPLQCNLFMYSSSKGTIKLSDMRSNSLCDSHAKIFEEYLDPSSHNFFTEITSSISDVKFSHDGRYIASRDYMTVKIWDLAMENKPIKTIDVHEHLRERLCDTYENDAIFDKFEVQFGGDNKSVMTGSYNNQFVIY 360
BLAST of FC875393 vs. ExPASy Swiss-Prot
Match: 2ABA_YEAST (Protein phosphatase PP2A regulatory subunit B OS=Saccharomyces cerevisiae GN=CDC55 PE=1 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 3.548e-76 Identity = 138/223 (61.88%), Postives = 174/223 (78.03%), Query Frame = 3 Query: 54 VSSLRLPVVVTSQETNLVAGC-RRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGGRVATGSYSNLFRVF 719 + SL+LP + SQ ++A +RIY++AH YHINSIS NSD ETF+SADDLRINLWNL+I +QSFNIVD+KP NME+LTEVITSAEFHP CN+ YSSSKG+I+L DMRQ++LCD +K FEE P +FFTEI +SISDIKF+ NGR+I SRDY+T+K+WD+NMD+ P+ T +HE L+ +L D YEND+IFDKFE SGD V TGSY+N F ++ Sbjct: 156 LQSLKLPQL--SQHDKIIAATPKRIYSNAHTYHINSISLNSDQETFLSADDLRINLWNLDIPDQSFNIVDIKPTNMEELTEVITSAEFHPQECNLFMYSSSKGTIKLCDMRQNSLCDNKTKTFEEYLDPINHNFFTEITSSISDIKFSPNGRYIASRDYLTVKIWDVNMDNKPLKTINIHEQLKERLSDTYENDAIFDKFEVNFSGDSSSVMTGSYNNNFMIY 376
BLAST of FC875393 vs. ExPASy Swiss-Prot
Match: 2ABB_PIG (Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Sus scrofa GN=PPP2R2B PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.068e-72 Identity = 130/225 (57.78%), Postives = 169/225 (75.11%), Query Frame = 3 Query: 45 PGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGGRVATGSYSNLFRVF 719 P +++LR+PV+ + + A RR++A+AH YHINSIS NSD ET++SADDLRINLWN EI+NQSFNI D+KPANME+LTEVIT+AEFHP HCN YSSSKG+IRL DMR SA +E E P RSF ++ +SISD+KF++ I++RDY+T+K+WD+NM++ P+ T+QVH +LR KLC LYEND IFDKFEC +G + TGSY+N FR+F Sbjct: 142 PATITTLRVPVL-RPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIADIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRASACVTGTPNFLKEPEDPSNRSFSLKLSSSISDVKFSQQWEDIMTRDYLTVKVWDLNMENRPIETYQVHNYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMF 365 The following BLAST results are available for this feature:
BLAST of FC875393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875393 ID=FC875393; Name=FC875393; organism=Citrus clementina; type=EST; length=725bpback to top |