FC875395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875395 vs. ExPASy Swiss-Prot
Match: PMA3_ARATH (ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2) HSP 1 Score: 287.345 bits (734), Expect = 4.977e-77 Identity = 143/215 (66.51%), Postives = 163/215 (75.81%), Query Frame = 2 Query: 2 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKPAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRQR 646 IRIV GFML+ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWK EIF TG+VLG Y+A+MTV+FFWAAYKTDFFPR F V L + H+ + SA+YLQVS +SQALIFVTRSRSWSF ERPG LL+AF +AQLIAT IAVY NW F LY+I+FY PLD +KF IRY L+G AW +I+ R AFT ++ Sbjct: 655 IRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYMAIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHE----MMSALYLQVSIVSQALIFVTRSRSWSFTERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFAIRYILAGTAWKNIIDNRTAFTTKQ 865
BLAST of FC875395 vs. ExPASy Swiss-Prot
Match: PMA2_ARATH (ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2) HSP 1 Score: 281.567 bits (719), Expect = 2.731e-75 Identity = 145/215 (67.44%), Postives = 162/215 (75.35%), Query Frame = 2 Query: 2 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKPAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRQR 646 IRIV GFML+ALIW+FDF FMVLIIAILNDGTIMTISKDRVKPSP PDSWK EIF TG+VLG Y A+MTVIFFWAA+KTDFF FGV ++ H+ L A+YLQVS ISQALIFVTRSRSWSFVERPG LL++AFLIAQLIATLIAVYANW F LY+I+ Y PLD KF IRY LSGKAW + E + AFT ++ Sbjct: 654 IRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHE----LMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKK 864
BLAST of FC875395 vs. ExPASy Swiss-Prot
Match: PMA4_NICPL (Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 6.084e-75 Identity = 139/215 (64.65%), Postives = 168/215 (78.14%), Query Frame = 2 Query: 2 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKPAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRQR 646 IRIV GFM +ALIWK+DF FMVLIIAILNDGTIMTISKDRVKPSP+PDSWK EIF TG+VLG Y A+MTV+FFWA + TDFF FGV +L + + + SA+YLQVS ISQALIFVTRSRSWSF+ERPG+LL++AF+IAQL+ATLIAVYANW+F LY+IIFY+PLD +KF IRY LSGKAW+ +++ + AFT ++ Sbjct: 657 IRIVFGFMFIALIWKYDFSAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGGYQALMTVVFFWAMHDTDFFSDKFGVKSLRNSDEE----MMSALYLQVSIISQALIFVTRSRSWSFLERPGMLLVIAFMIAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFYLPLDIMKFAIRYILSGKAWNNLLDNKTAFTTKK 867
BLAST of FC875395 vs. ExPASy Swiss-Prot
Match: PMA6_ARATH (ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.019e-74 Identity = 140/215 (65.12%), Postives = 168/215 (78.14%), Query Frame = 2 Query: 2 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKPAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRQR 646 IRIVLGFML+ALIW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP+PDSWK EIF TG+VLG+Y+A++TV+FFW A+ T FF FGV +L+ D+ +L + +YLQVS ISQALIFVTRSRSWSFVERPG+LLL+AF +AQLIATLIA YA+W F +Y+I+ YIPLD +KF RY LSGKAW+ +IE R AFT ++ Sbjct: 656 IRIVLGFMLVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMALVTVVFFWLAHDTTFFSDKFGVRSLQ--GKDE--ELIAVLYLQVSIISQALIFVTRSRSWSFVERPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFITRYTLSGKAWNNMIENRTAFTTKK 866
BLAST of FC875395 vs. ExPASy Swiss-Prot
Match: PMA1_ARATH (ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3) HSP 1 Score: 274.248 bits (700), Expect = 4.360e-73 Identity = 140/215 (65.12%), Postives = 164/215 (76.28%), Query Frame = 2 Query: 2 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKPAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRQR 646 IRIV GFML+ALIW+FDF FMVLIIAILNDGTIMTISKDRVKPSP PDSWK EIF TGIVLG Y A+M+VIFFWAA+KTDFF FGV ++ D+ +L A+YLQVS ISQALIFVTRSRSWSFVERPG LL++AF+IAQL+ATLIAVYA+W+F +Y+I+ Y P D +KF IRY LSGKAW + + R AFT ++ Sbjct: 654 IRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIMSVIFFWAAHKTDFFSDKFGV----RSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRYILSGKAWASLFDNRTAFTTKK 864
BLAST of FC875395 vs. ExPASy Swiss-Prot
Match: PMA7_ARATH (ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=AHA7 PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 9.713e-73 Identity = 137/224 (61.16%), Postives = 168/224 (75.00%), Query Frame = 2 Query: 2 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKPAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATL---------EKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRQR 646 IRIV+GFMLL + W+FDFPPFMVL+IAILNDGTIMTISKDRVKPSP PD WK EIF TG+VLG+YLA+MTV+FFWAAY+T+FF +F V +K A ++ASA+YLQVSTISQALIFVTRSRSWSFVERPG LL++AFLIAQL+A++I+ ANW F ++NI+ Y+ LD IKF +RYALSGK+WD ++E R A T ++ Sbjct: 654 IRIVMGFMLLCVFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLGAYLAIMTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTISQALIFVTRSRSWSFVERPGFLLVIAFLIAQLVASVISAMANWPFAGIRSIGWGWTGVIWIFNIVTYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGKK 877
BLAST of FC875395 vs. ExPASy Swiss-Prot
Match: PMA10_ARATH (ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=AHA10 PE=2 SV=2) HSP 1 Score: 263.848 bits (673), Expect = 5.893e-70 Identity = 134/215 (62.33%), Postives = 166/215 (77.21%), Query Frame = 2 Query: 2 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKPAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRQR 646 IRIVLGF LLALIW++DFPPFMVLIIAILNDGTIMTISKDRV+PSP P+SWK +IF TGIV+G+YLA++TV+F+W T FF + F V K+ ++ +++SA+YLQVS ISQALIFVTRSR WSF ERPG LL+ AF++AQL ATLIAVYAN SF LY++IFYIPLD IKF YALSG+AW+LV++++ AFT ++ Sbjct: 661 IRIVLGFTLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATGIVIGTYLALVTVLFYWIIVSTTFFEKHFHV----KSIANNSEQVSSAMYLQVSIISQALIFVTRSRGWSFFERPGTLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIPLDVIKFVFHYALSGEAWNLVLDRKTAFTYKK 871
BLAST of FC875395 vs. ExPASy Swiss-Prot
Match: PMA5_ARATH (ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=2 SV=3) HSP 1 Score: 262.692 bits (670), Expect = 1.313e-69 Identity = 133/215 (61.86%), Postives = 159/215 (73.95%), Query Frame = 2 Query: 2 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKPAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRQR 646 IRIV GFM +ALIW+FDF PFMVLIIAILNDGTIMTISKDR+KPSP PDSWK +IF+TG+VLG Y A+MTV+FFW +DFF FGV L + ++ +A+YLQVS ISQALIFVTRSRSWS+ E PG+LLL AF+IAQL+AT IAVYANWSF LY+ + YIPLD +KF IRY LSGKAW ++E + AFT ++ Sbjct: 654 IRIVFGFMFIALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALMTVVFFWVMKDSDFFSNYFGVRPLSQRP----EQMMAALYLQVSIISQALIFVTRSRSWSYAECPGLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRYVLSGKAWLNLLENKTAFTTKK 864
BLAST of FC875395 vs. ExPASy Swiss-Prot
Match: PMAX_ARATH (Putative ATPase, plasma membrane-like OS=Arabidopsis thaliana GN=At4g11730 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.840e-55 Identity = 113/204 (55.39%), Postives = 138/204 (67.65%), Query Frame = 2 Query: 2 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRV-KPSPLPDSWKPAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGKAWDL 610 IR+V GFM +ALIWKFDF PFMVL IA+LN+ T I+ D V PSP PDS K EIF TG+V GSY+A++TV+FFWAAY+TD FPR F V L + ++ A+YLQVS +SQAL FV +SRSW FVERPG LL ++F+ Q IAT +AVYA+W LYNIIF+ PLD +KF IRY L+GKA L Sbjct: 566 IRVVFGFMFIALIWKFDFSPFMVLAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDL----RGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSL 765
BLAST of FC875395 vs. ExPASy Swiss-Prot
Match: PMA1_DICDI (Probable plasma membrane ATPase OS=Dictyostelium discoideum GN=patB PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.734e-29 Identity = 76/214 (35.51%), Postives = 109/214 (50.93%), Query Frame = 2 Query: 2 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKPAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSF---------------XXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGK 598 +RI F +L + W F FP +IIAILNDGT++TISKDRV+ PD W E+FT + G YL T++FF + +F + L +L IYLQVS A IFV+RS+ +S+ ERPG L++ AF+++Q++AT I VY + ++ ++YIP+DFIK + Y L GK Sbjct: 794 VRICTTFGILTVAWNFKFPTIATVIIAILNDGTMLTISKDRVRARNEPDQWNLFEVFTMALCYGFYLVGSTIVFFAIIHDGTWFHDAINLRILTD------NELRGLIYLQVSISGLATIFVSRSQGFSYFERPGNLVIFAFVMSQIVATFIGVYGFRGYPHDSFSDNPDYPVHGTNFQGCGWGWAVCAWIWCFLWYIPMDFIKLGVTYILRGK 1001 The following BLAST results are available for this feature:
BLAST of FC875395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875395 ID=FC875395; Name=FC875395; organism=Citrus clementina; type=EST; length=686bpback to top |