FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPE_ARATH (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana GN=At1g24510 PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 5.527e-85 Identity = 138/157 (87.90%), Postives = 154/157 (98.09%), Query Frame = 3 Query: 111 MALAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND 581 MALAFDEFGRPFI+LR+Q++K+RLRG+DAQKAN++AGKAVARILR+SLGPKGMDKMLQ PDGD+TITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAG+LLEQAE+ L+RGIHPIRIAEGYEMASR+AVEHLERIAQKFEF +N+ Sbjct: 1 MALAFDEFGRPFIILREQDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVAVEHLERIAQKFEFDVNN 157 HSP 2 Score: 55.4546 bits (132), Expect = 5.527e-85 Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 2 Query: 599 TCMTTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLDL 721 TCMTTL+SK+VNR +R LAE +AVLAVADLER+ +LDL Sbjct: 164 TCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERRDVNLDL 204
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPE2_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 9.417e-82 Identity = 136/157 (86.62%), Postives = 149/157 (94.90%), Query Frame = 3 Query: 111 MALAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND 581 MAL FDE+ RPFI+LR+QE+KSRL+GLDAQKAN++AGK+VARILRTSLGPKGMDKMLQSPDGDVTITNDGATILE MDVDNQIAKLMVELSRSQDY+IGDGTTGVVVMAGSLLEQAEKLLERGIHPIR+AEGYEMASRIAV+HLE I+ K+EF D Sbjct: 1 MALDFDEYWRPFIILREQEKKSRLQGLDAQKANIAAGKSVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLMVELSRSQDYDIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRVAEGYEMASRIAVDHLESISTKYEFSATD 157 HSP 2 Score: 54.6842 bits (130), Expect = 9.417e-82 Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 2 Query: 599 TCMTTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLDL 721 TCMTTL+SK+V+R +R LAE +AVLAVADLERK +LDL Sbjct: 164 TCMTTLSSKIVSRCKRALAEIAVKAVLAVADLERKDVNLDL 204
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 1.602e-81 Identity = 134/157 (85.35%), Postives = 149/157 (94.90%), Query Frame = 3 Query: 111 MALAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND 581 MALAFDE+GRPFI+LR+QE+KSRL+GLDA KAN++A KA+ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILE MDVDNQIAKL+VELSRSQDY+IGDGTTGVVVMAG+LLEQAEKLLERGIHPIR+AEGYEMASRIAV+HLE I+ K+EF D Sbjct: 1 MALAFDEYGRPFIILREQEKKSRLQGLDAHKANIAAAKAIARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLLVELSRSQDYDIGDGTTGVVVMAGALLEQAEKLLERGIHPIRVAEGYEMASRIAVDHLESISTKYEFSATD 157 HSP 2 Score: 54.299 bits (129), Expect = 1.602e-81 Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 2 Query: 599 TCMTTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLDL 721 TCMTTL+SK+V+R +R LAE +AVLAVADLERK +LDL Sbjct: 164 TCMTTLSSKIVSRCKRALAEISVKAVLAVADLERKDVNLDL 204
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus GN=Cct5 PE=1 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.097e-61 Identity = 105/155 (67.74%), Postives = 134/155 (86.45%), Query Frame = 3 Query: 117 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND 581 LAFDE+GRPF++++ Q+ KSRL GL+A K+++ A KAVA +RTSLGP G+DKM+ DGDVTITNDGATIL MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AG+LLE+AE+LL+RGIHPIRIA+GYE A+RIA++HL++I+ K +N+ Sbjct: 7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTITNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDKVLVDINN 161 HSP 2 Score: 39.6614 bits (91), Expect = 1.097e-61 Identity = 19/41 (46.34%), Postives = 26/41 (63.41%), Query Frame = 2 Query: 599 TCMTTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLDL 721 T TTL SK++N R++AE AVL VAD+ER+ +L Sbjct: 168 TAKTTLGSKVINSCHRQMAEIAVNAVLTVADMERRDVDFEL 208
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 3.170e-61 Identity = 103/155 (66.45%), Postives = 132/155 (85.16%), Query Frame = 3 Query: 117 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND 581 LAFDE+GRPF++++ Q+ KSRL GL+A K+++ A KAVA +RTSLGP G+DKM+ DGDVT+TNDGATIL MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AG+LLE+AE+LL+RGIHPIRIA+GYE A+R+A+EHL++I+ + D Sbjct: 7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKD 161 HSP 2 Score: 40.0466 bits (92), Expect = 3.170e-61 Identity = 20/41 (48.78%), Postives = 26/41 (63.41%), Query Frame = 2 Query: 599 TCMTTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLDL 721 T TTL SK+VN R++AE AVL VAD+ER+ +L Sbjct: 168 TAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFEL 208
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 3.170e-61 Identity = 103/155 (66.45%), Postives = 132/155 (85.16%), Query Frame = 3 Query: 117 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND 581 LAFDE+GRPF++++ Q+ KSRL GL+A K+++ A KAVA +RTSLGP G+DKM+ DGDVT+TNDGATIL MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AG+LLE+AE+LL+RGIHPIRIA+GYE A+R+A+EHL++I+ + D Sbjct: 7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKD 161 HSP 2 Score: 40.0466 bits (92), Expect = 3.170e-61 Identity = 20/41 (48.78%), Postives = 26/41 (63.41%), Query Frame = 2 Query: 599 TCMTTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLDL 721 T TTL SK+VN R++AE AVL VAD+ER+ +L Sbjct: 168 TAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFEL 208
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 3.170e-61 Identity = 103/155 (66.45%), Postives = 132/155 (85.16%), Query Frame = 3 Query: 117 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND 581 LAFDE+GRPF++++ Q+ KSRL GL+A K+++ A KAVA +RTSLGP G+DKM+ DGDVT+TNDGATIL MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AG+LLE+AE+LL+RGIHPIRIA+GYE A+R+A+EHL++I+ + D Sbjct: 7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKD 161 HSP 2 Score: 40.0466 bits (92), Expect = 3.170e-61 Identity = 20/41 (48.78%), Postives = 26/41 (63.41%), Query Frame = 2 Query: 599 TCMTTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLDL 721 T TTL SK+VN R++AE AVL VAD+ER+ +L Sbjct: 168 TAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFEL 208
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus GN=Cct5 PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 4.133e-61 Identity = 103/155 (66.45%), Postives = 133/155 (85.81%), Query Frame = 3 Query: 117 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND 581 LAFDE+GRPF++++ Q+ KSRL GL+A K+++ A KAVA +RTSLGP G+DKM+ DGDVT+TNDGATIL MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AG+LLE+AE+LL+RGIHPIRIA+GYE A+RIA++HL++I+ +N+ Sbjct: 7 LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDNVLVDINN 161 HSP 2 Score: 40.0466 bits (92), Expect = 4.133e-61 Identity = 20/41 (48.78%), Postives = 26/41 (63.41%), Query Frame = 2 Query: 599 TCMTTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLDL 721 T TTL SK+VN R++AE AVL VAD+ER+ +L Sbjct: 168 TAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFEL 208
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum GN=cct5 PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.558e-60 Identity = 100/153 (65.36%), Postives = 128/153 (83.66%), Query Frame = 3 Query: 111 MALAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEF 569 M+L FDE+G PFI++R Q+ K RLRG++A ++++ A K ++ I+++SLGPKGMDKM+ S DG+V +TNDGATILE M VDNQIAKLMV+LS+SQD EIGDGTTGVVV+AGSLLEQAE+L+E+GIHP RI EGYE A +IA EHL+ I+ EF Sbjct: 1 MSLVFDEYGNPFIVIRDQQAKERLRGIEAHRSHILAAKTISNIMKSSLGPKGMDKMMVSQDGEVLVTNDGATILENMQVDNQIAKLMVQLSKSQDDEIGDGTTGVVVLAGSLLEQAEQLIEKGIHPCRIYEGYETACKIATEHLKTISDSIEF 153 HSP 2 Score: 43.8986 bits (102), Expect = 1.558e-60 Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 2 Query: 599 TCMTTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLD 718 T MT L SK+VNR R+++E +AV++VADLERK +L+ Sbjct: 164 TAMTCLGSKIVNRFHRQMSEIAVKAVISVADLERKDVNLE 203
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.541e-57 Identity = 97/149 (65.10%), Postives = 131/149 (87.92%), Query Frame = 3 Query: 117 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKF 563 L FDE G+PFI++R+QE + R+ G++A K+++ A +AVA LRTSLGP+G+DKML SPDGDVTITNDGATI+E+MDV + +AKLMVELS+SQD+EIGDGTTGVVV+AG+LLE+AEKL++RGIHPI+IA+G+++A + A+E L+ I+ KF Sbjct: 8 LLFDESGQPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKF 156 HSP 2 Score: 38.891 bits (89), Expect = 1.541e-57 Identity = 19/41 (46.34%), Postives = 27/41 (65.85%), Query Frame = 2 Query: 599 TCMTTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLDL 721 T T+L SK+VNR R+ AE AVL+VAD+E K + ++ Sbjct: 167 TAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEM 207 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |