FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.521e-54 Identity = 97/157 (61.78%), Postives = 132/157 (84.08%), Query Frame = 3 Query: 99 G*EKMALAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEF 569 G + + D+ G PFIL+R QE+K RL G+DA K+++ A K VA I+RTSLGP+G+DK+L SPDG++T+TNDGATIL+QM+V++QIAKL+V+LS+SQD EIGDGTTGVVV+AG+LLEQAE L+++GIHPIRIA+GYE A ++AV+HL+ I+ +F Sbjct: 3 GLDNAVMVRDDQGNPFILVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVDF 159 HSP 2 Score: 31.5722 bits (70), Expect = 1.521e-54 Identity = 16/38 (42.11%), Postives = 23/38 (60.53%), Query Frame = 2 Query: 608 TTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLDL 721 T+L SK+V++ A AVL+VADL+RK +L Sbjct: 173 TSLGSKVVSKAHDHFANIAVDAVLSVADLQRKDVDFEL 210
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPE_YEAST (T-complex protein 1 subunit epsilon OS=Saccharomyces cerevisiae GN=CCT5 PE=1 SV=3) HSP 1 Score: 183.726 bits (465), Expect = 8.455e-46 Identity = 85/143 (59.44%), Postives = 123/143 (86.01%), Query Frame = 3 Query: 117 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLE 545 +A DE GRPFI+++ Q K R GL+A+K+++ A ++VA I++TSLGP+G+DK+L SPDG++TITNDGATIL QM++DN+IAKL+V+LS+SQD EIGDGTTGVVV+A +LL+QA +L+++GIHPI+IA G++ A+++A+ LE Sbjct: 20 VAQDEMGRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLE 162
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPE_ENCCU (T-complex protein 1 subunit epsilon OS=Encephalitozoon cuniculi GN=CCT5 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.328e-39 Identity = 74/149 (49.66%), Postives = 110/149 (73.83%), Query Frame = 3 Query: 117 LAFDEFGRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV-DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 L DE G+ F + +++ R++G AN+ +++A L TSLGP GMDK+LQS D D+ +TNDGATIL++M++ +N I++L+V+LS SQD EIGDGTT VVV+A +LL+QA+ LL +G+HPI+I+EG+E+ AVEHL I+++ Sbjct: 4 LLTDELGQAF-QITDEDKGCRIKGQQCILANIGVVRSIATFLSTSLGPTGMDKILQSKDEDIVVTNDGATILKEMEMTENPISRLIVQLSESQDEEIGDGTTSVVVLASALLDQAQALLGQGVHPIKISEGFEVGLGHAVEHLSEISEE 151 HSP 2 Score: 37.3502 bits (85), Expect = 2.328e-39 Identity = 19/38 (50.00%), Postives = 24/38 (63.16%), Query Frame = 2 Query: 608 TTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLDL 721 T+L SK+V + R AE C AVL VAD+ERK +L Sbjct: 165 TSLGSKIVYKSLERFAEICTDAVLMVADMERKDLDFEL 202
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.130e-35 Identity = 71/135 (52.59%), Postives = 102/135 (75.56%), Query Frame = 3 Query: 162 QEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 Q K + + D +++N++A KAV+ +RTSLGP+GMDKM+Q+ +G+VTITNDGATIL+QM+V + AK++VELSR+QD E GDGTT VVV+AG+LL+ EKLL+ GIHP I++ ++ S AV+ L ++ E Sbjct: 15 QAYKDKSKPADIRQSNINAAKAVSDAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMNVIHPAAKMLVELSRAQDVEAGDGTTSVVVVAGALLKAVEKLLQMGIHPTAISDAFQKCSAKAVDILTEMSTPIE 149 HSP 2 Score: 25.0238 bits (53), Expect = 9.130e-35 Identity = 12/28 (42.86%), Postives = 19/28 (67.86%), Query Frame = 2 Query: 608 TTLNSKMVNRXQRRLAEDCCQAVLAVAD 691 T+LNSK+V++ +LA +AVL V + Sbjct: 162 TSLNSKVVSQHSSQLAPIAVEAVLKVTE 189
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.333e-34 Identity = 73/144 (50.69%), Postives = 104/144 (72.22%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 G P ++L+ E R G DAQ+ N+ A + +A ++++LGPKGMDKML GDV ITNDG TIL++MDV++ AK+++E++++QD E+GDGTT VV+AG LL++AE+LL++ IHP IA GY MA+ AVE LE IA + Sbjct: 6 GTPVLILK--EGTQRTVGRDAQRMNIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVVITNDGVTILKEMDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGYRMAANKAVEILESIAMDID 147
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 9.697e-34 Identity = 71/140 (50.71%), Postives = 103/140 (73.57%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 G+P I++ ++ R++ DAQ+ N+SA +AVA +R++LGPKGMDKML S GDVT+TNDG TIL++MD+DN A+++VE++ +Q+ E GDGTT V +AG LL+ AE LLER IHP I +GY +A+ A E ++ +A Sbjct: 9 GQPMIIMG--DDAQRVKDRDAQEHNISAARAVADAVRSTLGPKGMDKMLVSSMGDVTVTNDGVTILQEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLERDIHPTAIIKGYNLAAEQAREEVDNVA 146
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THS_METJA (Thermosome subunit OS=Methanocaldococcus jannaschii GN=ths PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.266e-33 Identity = 71/142 (50.00%), Postives = 103/142 (72.54%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 G P ++L Q + R G DAQ+ N+ AG+ +A +RT+LGPKGMDKML GD+ +TNDG TIL++M V++ AK+++E++++Q+ E+GDGTT VV+AG LL +AE+LL++ IHP I GYEMA AVE L+ IA++ Sbjct: 5 GAPIVVLPQNVK--RYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEMARNKAVEELKSIAKE 144
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33 Identity = 73/142 (51.41%), Postives = 104/142 (73.24%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ ITNDGATIL++MD+ + AK+MVE++++QD E GDGTT VV+AG LL++AE+LL++ IHP I +GY +AS+ A E L+ IA++ Sbjct: 6 GQPILIL--PEGTQRYVGRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYTLASQKAQEILDSIAKE 145
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33 Identity = 74/142 (52.11%), Postives = 103/142 (72.54%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 G+P ++L E R G DAQ+ N+ A + VA +RT+LGPKGMDKML GD+ ITNDGATIL++MD+ + AK+MVE++++QD E GDGTT VV+AG LL++AE+LL++ IHP I +GY +A+ A E LE IA++ Sbjct: 6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIVAETIRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYALAAEKAQEILEGIAKE 145
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSB_THEK8 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.175e-33 Identity = 72/141 (51.06%), Postives = 101/141 (71.63%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ ITNDGATIL++MD+ + AK+MVE++++QD E GDGTT VV+AG LL +AE+LL++ IHP I +GY +A+ A E L+ IA+ Sbjct: 6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDSIAR 144 HSP 2 Score: 23.0978 bits (48), Expect = 2.175e-33 Identity = 13/39 (33.33%), Postives = 18/39 (46.15%), Query Frame = 2 Query: 605 MTTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLDL 721 MT + K + LAE +AV VA+ H+DL Sbjct: 159 MTAITGKAAEEEREYLAEIAVEAVKQVAEKVGDRYHVDL 197 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |