FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 6.519e-22 Identity = 53/108 (49.07%), Postives = 76/108 (70.37%), Query Frame = 3 Query: 225 AVARILRTSLGPKGMDKMLQSP--DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL 542 A+ +++++LGPKGMDK+L S D + +TNDGATIL+ + VDN AK++V++SR QD E+GDGTT V V+A LL +AE L+ + IHP I G+ A++ A E L Sbjct: 34 AIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREAL 141
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 104.375 bits (259), Expect = 6.519e-22 Identity = 53/108 (49.07%), Postives = 76/108 (70.37%), Query Frame = 3 Query: 225 AVARILRTSLGPKGMDKMLQSP--DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL 542 A+ +++++LGPKGMDK+L S D + +TNDGATIL+ + VDN AK++V++SR QD E+GDGTT V V+A LL +AE L+ + IHP I G+ A++ A E L Sbjct: 34 AIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREAL 141
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPB_MOUSE (T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4) HSP 1 Score: 103.99 bits (258), Expect = 8.515e-22 Identity = 53/108 (49.07%), Postives = 76/108 (70.37%), Query Frame = 3 Query: 225 AVARILRTSLGPKGMDKMLQSP--DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL 542 A+ +++++LGPKGMDK+L S D + +TNDGATIL+ + VDN AK++V++SR QD E+GDGTT V V+A LL +AE L+ + IHP I G+ A++ A E L Sbjct: 34 AIGDLVKSTLGPKGMDKILLSSGRDAALMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIISGWREATKAAREAL 141
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPZ_CHICK (T-complex protein 1 subunit zeta OS=Gallus gallus GN=CCT6 PE=1 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 1.112e-21 Identity = 51/123 (41.46%), Postives = 80/123 (65.04%), Query Frame = 3 Query: 183 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 R A N+SA + + +LRT+LGPKG KML S GD+ +T DG +L++M + + A L+ +++ +QD GDGTT V++ G LL+QA+ + G+HP +AEG+E+A A+E LE++ Sbjct: 14 RAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLQEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIVAEGFEIAKEKALEVLEQV 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPB_BOVIN (T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=2 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 1.452e-21 Identity = 52/108 (48.15%), Postives = 76/108 (70.37%), Query Frame = 3 Query: 225 AVARILRTSLGPKGMDKMLQSP--DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL 542 A+ +++++LGPKGMDK+L S D + +TNDGATIL+ + VDN AK++V++SR QD E+GDGTT V V+A LL +AE L+ + IHP I G+ A++ A + L Sbjct: 34 AIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQAL 141
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPH_YEAST (T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae GN=CCT7 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21 Identity = 51/117 (43.59%), Postives = 79/117 (67.52%), Query Frame = 3 Query: 204 ANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 +N++A AV L+ +LGP G D ++ + + TI+NDGATIL+ +DV + AK +V++SR+QD E+GDGTT V ++AG L+++A+ LE GI I +GY A +AVE + +A Sbjct: 28 SNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELA 144
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPG_DICDI (T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21 Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMA 518 +AQ+ A K+VA I++T LGPK M KM+ P G +TNDG IL ++DV + AK M+ELSR+QD +GDGTT VV++A +L +E +E+ IHP I + + MA Sbjct: 19 EAQQGIFLAVKSVASIIKTCLGPKAMLKMILDPMGTTVVTNDGNAILREIDVTHPAAKSMIELSRAQDENVGDGTTSVVILAAEVLASSELFIEKKIHPHYIIKAFRMA 127
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPZ_DICDI (T-complex protein 1 subunit zeta OS=Dictyostelium discoideum GN=cct6 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 53/136 (38.97%), Postives = 80/136 (58.82%), Query Frame = 3 Query: 150 LLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 +++QQ + R A N+SAGK + +L+T+LGP+G KML GD+ +T DG +L +M + + A L+ + +QD GDGTT V+ G LL+Q+E+ L+ IHP IAEG+E+A + LE Q Sbjct: 4 MIKQQGAAADSRRGQALLLNISAGKGLQNVLKTNLGPRGTLKMLVGGGGDIKLTKDGKVLLHEMQIQHPTAALIARTATAQDDITGDGTTTNVITIGELLKQSERYLQENIHPRIIAEGFELAKDRCLAFLEEFKQ 139
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPW_BOVIN (T-complex protein 1 subunit zeta-2 OS=Bos taurus GN=CCT6B PE=2 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 54/128 (42.19%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 183 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 R A N+ A + + +LRT+LGPKG KML S GDV +T DG +L +M + + A L+ +++ +QD GDGTT V++ G LL+QA+ + G+HP IAEG+E+A A+E LE++ K E Sbjct: 15 RAQAALAVNICAARGLQDVLRTNLGPKGTMKMLVSGAGDVKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIAEGFEIAKIKALEVLEQVKIKKE 142
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPZ_MOUSE (T-complex protein 1 subunit zeta OS=Mus musculus GN=Cct6a PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 9.414e-21 Identity = 50/123 (40.65%), Postives = 77/123 (62.60%), Query Frame = 3 Query: 183 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 R A N+SA + + +LRT+LGPKG KML S GD+ +T DG +L +M + + A L+ +++ +QD GDGTT V++ G LL+QA+ + G+HP I EG+E A A++ LE++ Sbjct: 15 RAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQV 137 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |