FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPZ_BOVIN (T-complex protein 1 subunit zeta OS=Bos taurus GN=CCT6A PE=2 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 9.414e-21 Identity = 50/123 (40.65%), Postives = 77/123 (62.60%), Query Frame = 3 Query: 183 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 R A N+SA + + +LRT+LGPKG KML S GD+ +T DG +L +M + + A L+ +++ +QD GDGTT V++ G LL+QA+ + G+HP I EG+E A A++ LE++ Sbjct: 15 RAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQV 137
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPW_HUMAN (T-complex protein 1 subunit zeta-2 OS=Homo sapiens GN=CCT6B PE=1 SV=4) HSP 1 Score: 100.523 bits (249), Expect = 9.414e-21 Identity = 51/123 (41.46%), Postives = 77/123 (62.60%), Query Frame = 3 Query: 183 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 R A N+ A + + +LRT+LGPKG KML S GD+ +T DG +L++M + + A L+ +++ +QD GDGTT V++ G LL+QA+ + G+HP IAEG+E A A+E LE + Sbjct: 15 RAQAALAVNICAARGLQDVLRTNLGPKGTMKMLASGAGDIKLTKDGNVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIAEGFEAAKIKALEVLEEV 137
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPZ_RABIT (T-complex protein 1 subunit zeta OS=Oryctolagus cuniculus GN=CCT6 PE=2 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.229e-20 Identity = 51/123 (41.46%), Postives = 77/123 (62.60%), Query Frame = 3 Query: 183 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 R A N+SA + + +LRT+LGPKG KML S GD+ +T DG +L +M + + A L+ +++ +QD GDGTT V++ G LL+QA+ + G+HP I EG+E A A++ LE+I Sbjct: 15 RAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQVLEQI 137
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPZ_PONAB (T-complex protein 1 subunit zeta OS=Pongo abelii GN=CCT6 PE=2 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.229e-20 Identity = 50/123 (40.65%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 183 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 R A N+SA + + +LRT+LGPKG KML S GD+ +T DG +L +M + + A L+ +++ +QD GDGTT V++ G LL+QA+ + G+HP I EG+E A A++ LE + Sbjct: 15 RAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEEV 137
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPZ_HUMAN (T-complex protein 1 subunit zeta OS=Homo sapiens GN=CCT6A PE=1 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.229e-20 Identity = 50/123 (40.65%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 183 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 R A N+SA + + +LRT+LGPKG KML S GD+ +T DG +L +M + + A L+ +++ +QD GDGTT V++ G LL+QA+ + G+HP I EG+E A A++ LE + Sbjct: 15 RAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEEV 137
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPZ_CAEEL (T-complex protein 1 subunit zeta OS=Caenorhabditis elegans GN=cct-6 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.010e-20 Identity = 47/122 (38.52%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 195 AQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 A + N+S + + ++R++LGPKG KML S GD+ +T DG +L +M + + A ++ + S +QD GDGTT V++ G LL+QAE L+ G+HP + EG+E A+ +E LE+ ++ Sbjct: 19 ALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKFKKE 140 HSP 2 Score: 20.7866 bits (42), Expect = 7.010e-20 Identity = 12/39 (30.77%), Postives = 18/39 (46.15%), Query Frame = 2 Query: 602 CMTTLNSKMVNRXQRRLAEDCCQAVLAV-ADLERKGCHL 715 C T L +K+ + + E AVLA+ D E H+ Sbjct: 152 CRTALRTKLHQKLADHITECVVDAVLAIRRDGEEPDLHM 190
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPG_ENCCU (T-complex protein 1 subunit gamma OS=Encephalitozoon cuniculi GN=CCT3 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19 Identity = 44/119 (36.97%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 198 QKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 Q + A K ++ ++RT LGP+ M KM+ + + +TNDG IL ++DV + A+ ++EL+++QD E+GDGTT VV++A +L + +L+R +HPIRI + A I ++ ++ A Sbjct: 21 QNESAIAAKTISSVIRTCLGPRAMQKMVLTKINSIELTNDGNAILRELDVAHPSARSLIELAKTQDDEVGDGTTSVVLLAAEILNEMTYILDRDVHPIRICKALGRALEICIKAIDGAA 139
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPW_MOUSE (T-complex protein 1 subunit zeta-2 OS=Mus musculus GN=Cct6b PE=2 SV=4) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 47/123 (38.21%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 183 RGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 R A N+ A + + +LR +LGPKG KML S GD+ +T DG +L +M + + A ++ +++ +QD+ GDGTT V++ G LL+QA+ + G+HP I EG+++A A+E L+ I Sbjct: 15 RSQAALAVNICAARGLQDVLRPTLGPKGALKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASIIAKVAAAQDHVTGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFDVAKTKALEVLDEI 137
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPQ_PONAB (T-complex protein 1 subunit theta OS=Pongo abelii GN=CCT8 PE=2 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 52/120 (43.33%), Postives = 77/120 (64.17%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 +A N+ A K +A+ RT+ GP GM+KM+ + + +TND ATIL +++V + AK++V S Q+ E+GDGT V+V AG+LLE AE+LL G+ + EGYE+A R A E L + Sbjct: 27 EAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEGYEIACRKAHEILPNL 146
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPQ_MACFA (T-complex protein 1 subunit theta OS=Macaca fascicularis GN=CCT8 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 52/120 (43.33%), Postives = 77/120 (64.17%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERI 551 +A N+ A K +A+ RT+ GP GM+KM+ + + +TND ATIL +++V + AK++V S Q+ E+GDGT V+V AG+LLE AE+LL G+ + EGYE+A R A E L + Sbjct: 27 EAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEGYEIACRKAHEILPNL 146 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |